Variant report
| Variant | rs337798 |
|---|---|
| Chromosome Location | chr19:40584917-40584918 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr19:40578600-40586200 | ZNF genes & repeats | Primary T helper cells PMA-I stimulated | -- |
| 2 | chr19:40578600-40586600 | ZNF genes & repeats | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 3 | chr19:40578600-40586600 | ZNF genes & repeats | Liver | Liver |
| 4 | chr19:40578600-40586600 | ZNF genes & repeats | A549 | lung |
| 5 | chr19:40578600-40586800 | ZNF genes & repeats | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 6 | chr19:40578600-40590400 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 7 | chr19:40578800-40586600 | ZNF genes & repeats | HUES6 Cell Line | embryonic stem cell |
| 8 | chr19:40578800-40587200 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 9 | chr19:40579000-40586600 | ZNF genes & repeats | Monocytes-CD14+_RO01746 | blood |
| 10 | chr19:40579000-40587000 | ZNF genes & repeats | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 11 | chr19:40579000-40587000 | ZNF genes & repeats | HUES64 Cell Line | embryonic stem cell |
| 12 | chr19:40579200-40585000 | ZNF genes & repeats | Primary B cells from cord blood | blood |
| 13 | chr19:40579200-40585600 | ZNF genes & repeats | Primary T regulatory cells fromperipheralblood | blood |
| 14 | chr19:40579200-40585600 | ZNF genes & repeats | Adipose Nuclei | Adipose |
| 15 | chr19:40579200-40585800 | ZNF genes & repeats | Primary T cells from cord blood | blood |
| 16 | chr19:40579200-40586600 | ZNF genes & repeats | Primary T helper cells fromperipheralblood | blood |
| 17 | chr19:40579200-40586600 | ZNF genes & repeats | Duodenum Smooth Muscle | Duodenum |
| 18 | chr19:40579200-40586800 | ZNF genes & repeats | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 19 | chr19:40579200-40586800 | ZNF genes & repeats | GM12878-XiMat | blood |
| 20 | chr19:40579200-40589600 | Strong transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 21 | chr19:40579400-40585000 | ZNF genes & repeats | Primary T cells fromperipheralblood | blood |
| 22 | chr19:40579400-40585400 | Strong transcription | HepG2 | liver |
| 23 | chr19:40579400-40590400 | Strong transcription | Cortex derived primary cultured neurospheres | brain |
| 24 | chr19:40579600-40586600 | ZNF genes & repeats | Primary B cells from peripheral blood | blood |
| 25 | chr19:40579600-40590800 | Strong transcription | Skeletal Muscle Female | skeletal muscle |
| 26 | chr19:40579600-40591200 | Strong transcription | Fetal Thymus | thymus |
| 27 | chr19:40579800-40585000 | ZNF genes & repeats | Primary T helper naive cells fromperipheralblood | blood |
| 28 | chr19:40579800-40586800 | Strong transcription | Fetal Brain Male | brain |
| 29 | chr19:40580000-40586600 | ZNF genes & repeats | Ganglion Eminence derived primary cultured neurospheres | brain |
| 30 | chr19:40580600-40591000 | Strong transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 31 | chr19:40581600-40586600 | ZNF genes & repeats | Fetal Brain Female | brain |
| 32 | chr19:40581800-40586200 | Strong transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 33 | chr19:40581800-40587000 | Strong transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 34 | chr19:40581800-40595600 | Weak transcription | Stomach Mucosa | stomach |
| 35 | chr19:40582000-40585000 | ZNF genes & repeats | Fetal Intestine Large | intestine |
| 36 | chr19:40582000-40586400 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 37 | chr19:40582000-40586600 | ZNF genes & repeats | Dnd41 | blood |
| 38 | chr19:40582000-40591200 | Strong transcription | Rectal Mucosa Donor 29 | rectum |
| 39 | chr19:40582200-40588800 | Strong transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 40 | chr19:40582400-40585000 | ZNF genes & repeats | H9 Derived Neuron Cultured Cells | ES cell derived |
| 41 | chr19:40583000-40586200 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 42 | chr19:40583000-40595400 | Weak transcription | NHLF | lung |
| 43 | chr19:40583200-40586200 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 44 | chr19:40583200-40587200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 45 | chr19:40583200-40587400 | Weak transcription | HUVEC | blood vessel |
| 46 | chr19:40583200-40588400 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 47 | chr19:40583200-40588800 | Weak transcription | Esophagus | oesophagus |
| 48 | chr19:40583200-40590800 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 49 | chr19:40583200-40595400 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 50 | chr19:40583200-40595400 | Weak transcription | Lung | lung |
