The 2.0 version of rSNPBase

Variant report

Variant rs73543974
Chromosome Location chr19:40457851-40457852
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:40450000-40461200 Enhancers Primary T cells fromperipheralblood blood
2 chr19:40450000-40461800 Enhancers Primary T helper cells fromperipheralblood blood
3 chr19:40450400-40458600 Weak transcription Thymus Thymus
4 chr19:40451600-40458800 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr19:40453000-40466000 Weak transcription Fetal Intestine Small intestine
6 chr19:40454400-40459200 Enhancers Primary T helper 17 cells PMA-I stimulated --
7 chr19:40454800-40459000 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
8 chr19:40454800-40460000 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
9 chr19:40455000-40460400 Enhancers Primary T regulatory cells fromperipheralblood blood
10 chr19:40455800-40458400 Flanking Bivalent TSS/Enh Primary T cells from cord blood blood
11 chr19:40456000-40460400 Enhancers Primary Natural Killer cells fromperipheralblood blood
12 chr19:40456400-40459600 Flanking Active TSS Primary B cells from cord blood blood
13 chr19:40457000-40458000 Enhancers Rectal Mucosa Donor 29 rectum
14 chr19:40457000-40458000 Enhancers Rectal Mucosa Donor 31 rectum
15 chr19:40457000-40458200 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
16 chr19:40457000-40458400 Bivalent Enhancer Primary monocytes fromperipheralblood blood
17 chr19:40457000-40458600 Enhancers Dnd41 blood
18 chr19:40457000-40458600 Bivalent Enhancer Monocytes-CD14+_RO01746 blood
19 chr19:40457200-40458000 Enhancers Small Intestine intestine
20 chr19:40457200-40458600 Weak transcription Brain Hippocampus Middle brain
21 chr19:40457200-40459400 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
22 chr19:40457200-40460200 Enhancers Primary mononuclear cells fromperipheralblood Blood
23 chr19:40457400-40458000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr19:40457400-40458400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr19:40457400-40458400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
26 chr19:40457400-40475600 Weak transcription Breast Myoepithelial Primary Cells Breast
27 chr19:40457600-40458000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr19:40457600-40458000 Bivalent Enhancer Primary hematopoietic stem cells blood
29 chr19:40457600-40458000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr19:40457600-40458000 Enhancers Fetal Adrenal Gland Adrenal Gland
31 chr19:40457600-40458400 Flanking Active TSS Primary B cells from peripheral blood blood
32 chr19:40457600-40458400 Flanking Active TSS Fetal Thymus thymus
33 chr19:40457600-40459200 Enhancers GM12878-XiMat blood
34 chr19:40457600-40459400 Flanking Active TSS Primary T helper cells PMA-I stimulated --
35 chr19:40457600-40460000 Enhancers Stomach Mucosa stomach
36 chr19:40457600-40460200 Enhancers Spleen Spleen
37 chr19:40457800-40458000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
38 chr19:40457800-40458000 Enhancers A549 lung
39 chr19:40457800-40458200 Enhancers Primary T killer memory cells from peripheral blood blood
40 chr19:40457800-40458400 Enhancers HMEC breast
41 chr19:40457800-40459600 Flanking Active TSS Primary T helper naive cells from peripheral blood blood

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Last update: Aug 31, 2015