The 2.0 version of rSNPBase

Variant report

Variant rs10406738
Chromosome Location chr19:40501055-40501056
allele A/C/G
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:40477800-40501800 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr19:40478600-40501800 Weak transcription Right Atrium heart
3 chr19:40487600-40501800 Weak transcription Right Ventricle heart
4 chr19:40488200-40501800 Weak transcription Esophagus oesophagus
5 chr19:40488400-40501800 Weak transcription Left Ventricle heart
6 chr19:40488800-40501800 Weak transcription Rectal Smooth Muscle rectum
7 chr19:40489000-40501600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
8 chr19:40490200-40501600 Weak transcription HSMM muscle
9 chr19:40490200-40501600 Weak transcription Osteobl bone
10 chr19:40490200-40501800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr19:40490200-40501800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr19:40490200-40502400 Weak transcription Aorta Aorta
13 chr19:40490400-40501800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr19:40491000-40502200 Weak transcription Ovary ovary
15 chr19:40493000-40501800 Weak transcription Brain Angular Gyrus brain
16 chr19:40493000-40501800 Weak transcription Skeletal Muscle Female skeletal muscle
17 chr19:40493200-40501800 Weak transcription Placenta Amnion Placenta Amnion
18 chr19:40493400-40501800 Weak transcription Psoas Muscle Psoas
19 chr19:40493600-40501600 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr19:40494400-40501800 Weak transcription Stomach Smooth Muscle stomach
21 chr19:40495400-40501800 Weak transcription Adipose Nuclei Adipose
22 chr19:40495600-40501800 Weak transcription HSMMtube muscle
23 chr19:40496200-40501800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr19:40496600-40502200 Weak transcription Fetal Muscle Trunk muscle
25 chr19:40497600-40501400 Weak transcription Pancreas Pancrea
26 chr19:40497600-40501600 Weak transcription Primary T killer naive cells fromperipheralblood blood
27 chr19:40498800-40501800 Weak transcription Pancreatic Islets Pancreatic Islet
28 chr19:40499600-40501800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr19:40500000-40501200 Enhancers Fetal Intestine Large intestine
30 chr19:40500000-40501800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr19:40500000-40501800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr19:40500000-40501800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr19:40500000-40501800 Weak transcription Placenta Placenta
34 chr19:40500000-40501800 Weak transcription Lung lung
35 chr19:40500000-40501800 Weak transcription Sigmoid Colon Sigmoid Colon
36 chr19:40500200-40501200 Enhancers Fetal Intestine Small intestine
37 chr19:40500200-40501400 Weak transcription Primary T cells fromperipheralblood blood
38 chr19:40500200-40501600 Weak transcription Primary B cells from cord blood blood
39 chr19:40500200-40501600 Weak transcription Primary T helper naive cells fromperipheralblood blood
40 chr19:40500200-40501600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
41 chr19:40500200-40501600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
42 chr19:40500200-40501800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr19:40500200-40501800 Weak transcription Fetal Stomach stomach
44 chr19:40500200-40501800 Weak transcription Fetal Thymus thymus
45 chr19:40500200-40502000 Weak transcription Primary hematopoietic stem cells blood
46 chr19:40500200-40502200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr19:40500200-40502200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
48 chr19:40500400-40501800 Weak transcription Primary B cells from peripheral blood blood
49 chr19:40500400-40502200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
50 chr19:40500800-40501200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin

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Last update: Aug 31, 2015