Variant report

Variant rs2111543
Chromosome Location chr19:40519905-40519906
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:40504000-40533800 Weak transcription Placenta Amnion Placenta Amnion
2 chr19:40511600-40522000 ZNF genes & repeats A549 lung
3 chr19:40512000-40527200 ZNF genes & repeats Liver Liver
4 chr19:40513400-40521800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr19:40513600-40522200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr19:40514000-40523000 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
7 chr19:40515400-40521600 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
8 chr19:40515600-40520000 Weak transcription Brain Germinal Matrix brain
9 chr19:40515600-40522200 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
10 chr19:40516800-40520400 Weak transcription Fetal Stomach stomach
11 chr19:40517400-40521400 ZNF genes & repeats Primary hematopoietic stem cells blood
12 chr19:40517400-40522800 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr19:40517600-40521200 ZNF genes & repeats Primary neutrophils fromperipheralblood blood
14 chr19:40517600-40521600 ZNF genes & repeats Fetal Muscle Leg muscle
15 chr19:40517600-40521800 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
16 chr19:40517600-40521800 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr19:40517600-40522200 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
18 chr19:40517600-40522200 ZNF genes & repeats Primary T cells from cord blood blood
19 chr19:40517600-40522200 ZNF genes & repeats Fetal Lung lung
20 chr19:40517600-40522400 ZNF genes & repeats Adipose Nuclei Adipose
21 chr19:40517600-40522400 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
22 chr19:40517800-40520800 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
23 chr19:40517800-40521000 Weak transcription Lung lung
24 chr19:40517800-40521200 ZNF genes & repeats Primary B cells from peripheral blood blood
25 chr19:40517800-40521400 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
26 chr19:40517800-40522000 ZNF genes & repeats Primary B cells from cord blood blood
27 chr19:40518200-40521800 Weak transcription Placenta Placenta
28 chr19:40519000-40520800 ZNF genes & repeats Primary Natural Killer cells fromperipheralblood blood
29 chr19:40519000-40520800 Strong transcription Fetal Thymus thymus
30 chr19:40519000-40521000 ZNF genes & repeats Colon Smooth Muscle Colon
31 chr19:40519000-40521400 ZNF genes & repeats Muscle Satellite Cultured Cells --
32 chr19:40519000-40521400 ZNF genes & repeats Brain Substantia Nigra brain
33 chr19:40519000-40521400 ZNF genes & repeats HepG2 liver
34 chr19:40519000-40521400 ZNF genes & repeats NHDF-Ad bronchial
35 chr19:40519000-40521800 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
36 chr19:40519200-40520400 ZNF genes & repeats Small Intestine intestine
37 chr19:40519200-40520800 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
38 chr19:40519200-40520800 ZNF genes & repeats Psoas Muscle Psoas
39 chr19:40519200-40521000 ZNF genes & repeats Fetal Muscle Trunk muscle
40 chr19:40519200-40521400 ZNF genes & repeats Fetal Brain Female brain
41 chr19:40519200-40521400 ZNF genes & repeats HSMMtube muscle
42 chr19:40519200-40521600 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr19:40519200-40521600 ZNF genes & repeats Fetal Kidney kidney
44 chr19:40519200-40521600 ZNF genes & repeats Sigmoid Colon Sigmoid Colon
45 chr19:40519200-40521800 ZNF genes & repeats Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr19:40519200-40521800 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
47 chr19:40519200-40522000 ZNF genes & repeats Brain Anterior Caudate brain
48 chr19:40519200-40522200 ZNF genes & repeats Brain Inferior Temporal Lobe brain
49 chr19:40519200-40522400 ZNF genes & repeats Brain Cingulate Gyrus brain
50 chr19:40519200-40522400 ZNF genes & repeats Duodenum Mucosa Duodenum

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