The 2.0 version of rSNPBase

Variant report

Variant rs404754
Chromosome Location chr19:40495203-40495204
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:40477800-40501800 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr19:40478600-40501800 Weak transcription Right Atrium heart
3 chr19:40487200-40499600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr19:40487600-40501800 Weak transcription Right Ventricle heart
5 chr19:40488200-40497000 Weak transcription Pancreas Pancrea
6 chr19:40488200-40497400 Weak transcription Gastric stomach
7 chr19:40488200-40499600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr19:40488200-40501800 Weak transcription Esophagus oesophagus
9 chr19:40488400-40501800 Weak transcription Left Ventricle heart
10 chr19:40488800-40501800 Weak transcription Rectal Smooth Muscle rectum
11 chr19:40489000-40501600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
12 chr19:40489600-40500200 Weak transcription Fetal Kidney kidney
13 chr19:40490000-40497200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
14 chr19:40490200-40499600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr19:40490200-40499600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
16 chr19:40490200-40499800 Weak transcription Lung lung
17 chr19:40490200-40501600 Weak transcription HSMM muscle
18 chr19:40490200-40501600 Weak transcription Osteobl bone
19 chr19:40490200-40501800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr19:40490200-40501800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
21 chr19:40490200-40502400 Weak transcription Aorta Aorta
22 chr19:40490400-40499600 Weak transcription Fetal Thymus thymus
23 chr19:40490400-40501800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr19:40491000-40502200 Weak transcription Ovary ovary
25 chr19:40493000-40501800 Weak transcription Brain Angular Gyrus brain
26 chr19:40493000-40501800 Weak transcription Skeletal Muscle Female skeletal muscle
27 chr19:40493200-40501800 Weak transcription Placenta Amnion Placenta Amnion
28 chr19:40493400-40499600 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr19:40493400-40499800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr19:40493400-40501800 Weak transcription Psoas Muscle Psoas
31 chr19:40493600-40499400 Weak transcription Primary B cells from cord blood blood
32 chr19:40493600-40501000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
33 chr19:40493600-40501600 Weak transcription Duodenum Smooth Muscle Duodenum
34 chr19:40493800-40498600 Weak transcription Fetal Brain Female brain
35 chr19:40494000-40496800 Weak transcription Primary T helper cells fromperipheralblood blood
36 chr19:40494200-40497200 Weak transcription Fetal Intestine Small intestine
37 chr19:40494400-40498800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
38 chr19:40494400-40499200 Weak transcription Primary hematopoietic stem cells blood
39 chr19:40494400-40501800 Weak transcription Stomach Smooth Muscle stomach
40 chr19:40494800-40498800 Weak transcription Fetal Stomach stomach
41 chr19:40494800-40499000 Weak transcription Primary hematopoietic stem cells short term culture blood
42 chr19:40494800-40499600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015