Variant report

Variant rs2231737
Chromosome Location chr19:40450105-40450106
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:40442000-40450400 Weak transcription Brain Substantia Nigra brain
2 chr19:40442400-40450400 Weak transcription Lung lung
3 chr19:40446800-40451600 Enhancers Sigmoid Colon Sigmoid Colon
4 chr19:40446800-40453000 Enhancers Fetal Intestine Large intestine
5 chr19:40446800-40453000 Enhancers Stomach Mucosa stomach
6 chr19:40447000-40450400 Enhancers Thymus Thymus
7 chr19:40447000-40450800 Enhancers Fetal Thymus thymus
8 chr19:40447200-40453000 Enhancers Fetal Intestine Small intestine
9 chr19:40447400-40450200 Enhancers Duodenum Smooth Muscle Duodenum
10 chr19:40447400-40451200 Enhancers Primary monocytes fromperipheralblood blood
11 chr19:40447600-40451000 Weak transcription Brain Hippocampus Middle brain
12 chr19:40447600-40451400 Enhancers Fetal Kidney kidney
13 chr19:40447800-40451600 Enhancers Colonic Mucosa Colon
14 chr19:40447800-40452800 Enhancers Primary Natural Killer cells fromperipheralblood blood
15 chr19:40447800-40457000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
16 chr19:40448200-40453200 Enhancers Primary B cells from peripheral blood blood
17 chr19:40448400-40450200 Enhancers Primary T helper naive cells from peripheral blood blood
18 chr19:40448400-40450200 Enhancers Primary T helper 17 cells PMA-I stimulated --
19 chr19:40448400-40455600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
20 chr19:40448400-40457600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr19:40448600-40450600 Enhancers GM12878-XiMat blood
22 chr19:40448600-40452400 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
23 chr19:40448600-40453000 Enhancers Primary B cells from cord blood blood
24 chr19:40449000-40450200 Enhancers HepG2 liver
25 chr19:40449000-40450800 Enhancers Pancreas Pancrea
26 chr19:40449000-40451200 Enhancers Adipose Nuclei Adipose
27 chr19:40449000-40451400 Enhancers Primary mononuclear cells fromperipheralblood Blood
28 chr19:40449000-40452800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr19:40449200-40457200 Weak transcription Small Intestine intestine
30 chr19:40449400-40450600 Flanking Bivalent TSS/Enh Monocytes-CD14+_RO01746 blood
31 chr19:40449600-40450200 Flanking Active TSS Primary T cells from cord blood blood
32 chr19:40449600-40450400 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
33 chr19:40449600-40450600 Enhancers Liver Liver
34 chr19:40449600-40450600 Flanking Active TSS Duodenum Mucosa Duodenum
35 chr19:40449600-40450600 Flanking Active TSS Dnd41 blood
36 chr19:40449600-40451200 Enhancers Fetal Lung lung
37 chr19:40449600-40451400 Flanking Active TSS A549 lung
38 chr19:40449800-40450200 Enhancers Primary hematopoietic stem cells blood
39 chr19:40449800-40450400 Weak transcription Fetal Muscle Trunk muscle
40 chr19:40449800-40450400 Weak transcription Placenta Placenta
41 chr19:40449800-40450600 Bivalent Enhancer Primary neutrophils fromperipheralblood blood
42 chr19:40449800-40452400 Enhancers Rectal Mucosa Donor 31 rectum
43 chr19:40450000-40450200 Bivalent Enhancer Primary hematopoietic stem cells short term culture blood
44 chr19:40450000-40450200 Flanking Active TSS Primary T helper cells PMA-I stimulated --
45 chr19:40450000-40450200 Weak transcription Esophagus oesophagus
46 chr19:40450000-40450200 Enhancers HMEC breast
47 chr19:40450000-40450400 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
48 chr19:40450000-40450400 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
49 chr19:40450000-40450400 Enhancers Rectal Mucosa Donor 29 rectum
50 chr19:40450000-40450600 Enhancers Colon Smooth Muscle Colon

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