Variant report
| Variant | rs234308 |
|---|---|
| Chromosome Location | chr19:40517266-40517267 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr19:40503600-40519200 | Weak transcription | Small Intestine | intestine |
| 2 | chr19:40504000-40517600 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 3 | chr19:40504000-40519600 | Weak transcription | Fetal Brain Male | brain |
| 4 | chr19:40504000-40519600 | Weak transcription | Hela-S3 | cervix |
| 5 | chr19:40504000-40533800 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 6 | chr19:40511400-40517400 | Strong transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 7 | chr19:40511400-40518000 | Strong transcription | Brain Hippocampus Middle | brain |
| 8 | chr19:40511600-40522000 | ZNF genes & repeats | A549 | lung |
| 9 | chr19:40511800-40518000 | Strong transcription | Colon Smooth Muscle | Colon |
| 10 | chr19:40512000-40517600 | Strong transcription | Skeletal Muscle Female | skeletal muscle |
| 11 | chr19:40512000-40517800 | Strong transcription | Primary B cells from cord blood | blood |
| 12 | chr19:40512000-40519200 | Strong transcription | Brain Inferior Temporal Lobe | brain |
| 13 | chr19:40512000-40527200 | ZNF genes & repeats | Liver | Liver |
| 14 | chr19:40512200-40517600 | Strong transcription | Duodenum Smooth Muscle | Duodenum |
| 15 | chr19:40512200-40517800 | Strong transcription | Primary B cells from peripheral blood | blood |
| 16 | chr19:40512200-40518600 | Strong transcription | Brain Anterior Caudate | brain |
| 17 | chr19:40512600-40517400 | Weak transcription | NH-A | brain |
| 18 | chr19:40512600-40518000 | Strong transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 19 | chr19:40512600-40519600 | Weak transcription | Colonic Mucosa | Colon |
| 20 | chr19:40512800-40517600 | Weak transcription | HUVEC | blood vessel |
| 21 | chr19:40512800-40518200 | Strong transcription | Fetal Thymus | thymus |
| 22 | chr19:40512800-40518200 | Strong transcription | Left Ventricle | heart |
| 23 | chr19:40513000-40518400 | Strong transcription | Skeletal Muscle Male | skeletal muscle |
| 24 | chr19:40513200-40517600 | Strong transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 25 | chr19:40513400-40518800 | Strong transcription | Brain Cingulate Gyrus | brain |
| 26 | chr19:40513400-40521800 | ZNF genes & repeats | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 27 | chr19:40513600-40522200 | ZNF genes & repeats | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 28 | chr19:40513800-40518000 | Strong transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 29 | chr19:40513800-40518400 | Strong transcription | Brain Angular Gyrus | brain |
| 30 | chr19:40514000-40523000 | ZNF genes & repeats | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 31 | chr19:40514400-40517600 | Weak transcription | Psoas Muscle | Psoas |
| 32 | chr19:40514800-40517600 | Strong transcription | Adipose Nuclei | Adipose |
| 33 | chr19:40514800-40517600 | Weak transcription | Gastric | stomach |
| 34 | chr19:40514800-40517600 | Weak transcription | Spleen | Spleen |
| 35 | chr19:40514800-40517800 | Weak transcription | Fetal Muscle Trunk | muscle |
| 36 | chr19:40514800-40519600 | Weak transcription | Right Ventricle | heart |
| 37 | chr19:40515000-40517600 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 38 | chr19:40515000-40517800 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 39 | chr19:40515000-40518200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 40 | chr19:40515000-40519000 | Weak transcription | HepG2 | liver |
| 41 | chr19:40515000-40519400 | Weak transcription | Fetal Intestine Large | intestine |
| 42 | chr19:40515200-40517400 | Weak transcription | Brain Substantia Nigra | brain |
| 43 | chr19:40515200-40517600 | Weak transcription | Lung | lung |
| 44 | chr19:40515200-40517600 | Strong transcription | Ovary | ovary |
| 45 | chr19:40515200-40517600 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 46 | chr19:40515200-40517600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 47 | chr19:40515200-40517600 | Weak transcription | NHLF | lung |
| 48 | chr19:40515200-40519200 | Weak transcription | HSMMtube | muscle |
| 49 | chr19:40515200-40519600 | Weak transcription | Rectal Smooth Muscle | rectum |
| 50 | chr19:40515200-40519800 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
