The 2.0 version of rSNPBase

Variant report

Variant rs73545955
Chromosome Location chr19:40489753-40489754
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:40477800-40501800 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr19:40478400-40490000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
3 chr19:40478400-40490400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr19:40478400-40491000 Strong transcription Rectal Mucosa Donor 29 rectum
5 chr19:40478400-40491200 Weak transcription Fetal Heart heart
6 chr19:40478600-40489800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr19:40478600-40490000 Strong transcription Skeletal Muscle Female skeletal muscle
8 chr19:40478600-40501800 Weak transcription Right Atrium heart
9 chr19:40479000-40490200 Strong transcription HSMMtube muscle
10 chr19:40479200-40490200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr19:40479600-40490200 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr19:40481800-40490800 Weak transcription Stomach Mucosa stomach
13 chr19:40482800-40489800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
14 chr19:40482800-40490000 Strong transcription Primary T cells fromperipheralblood blood
15 chr19:40482800-40490000 Strong transcription Brain Hippocampus Middle brain
16 chr19:40482800-40490200 Strong transcription Osteobl bone
17 chr19:40483200-40489800 Strong transcription Muscle Satellite Cultured Cells --
18 chr19:40483200-40489800 Strong transcription Duodenum Mucosa Duodenum
19 chr19:40483200-40489800 Strong transcription HSMM muscle
20 chr19:40483200-40490000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr19:40483200-40490000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr19:40483200-40490400 Strong transcription Fetal Thymus thymus
23 chr19:40483800-40489800 Strong transcription H1 Cell Line embryonic stem cell
24 chr19:40485400-40490000 Strong transcription Skeletal Muscle Male skeletal muscle
25 chr19:40485800-40494600 ZNF genes & repeats A549 lung
26 chr19:40486400-40489800 Weak transcription Primary T killer memory cells from peripheral blood blood
27 chr19:40486800-40490800 Weak transcription Primary T killer naive cells fromperipheralblood blood
28 chr19:40486800-40492800 Weak transcription Placenta Amnion Placenta Amnion
29 chr19:40487200-40489800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr19:40487200-40490000 ZNF genes & repeats GM12878-XiMat blood
31 chr19:40487200-40499600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
32 chr19:40487400-40489800 Weak transcription Brain Substantia Nigra brain
33 chr19:40487400-40489800 Weak transcription HMEC breast
34 chr19:40487600-40489800 Weak transcription Psoas Muscle Psoas
35 chr19:40487600-40490000 Weak transcription Small Intestine intestine
36 chr19:40487600-40492200 Weak transcription Fetal Brain Male brain
37 chr19:40487600-40501800 Weak transcription Right Ventricle heart
38 chr19:40487800-40490000 Weak transcription Aorta Aorta
39 chr19:40488000-40490200 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr19:40488200-40489800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
41 chr19:40488200-40489800 Weak transcription Brain Cingulate Gyrus brain
42 chr19:40488200-40489800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
43 chr19:40488200-40489800 Weak transcription Fetal Muscle Trunk muscle
44 chr19:40488200-40489800 Weak transcription Sigmoid Colon Sigmoid Colon
45 chr19:40488200-40490200 Weak transcription Ovary ovary
46 chr19:40488200-40492400 Weak transcription Brain Inferior Temporal Lobe brain
47 chr19:40488200-40497000 Weak transcription Pancreas Pancrea
48 chr19:40488200-40497400 Weak transcription Gastric stomach
49 chr19:40488200-40499600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr19:40488200-40501800 Weak transcription Esophagus oesophagus

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015