The 2.0 version of rSNPBase

Variant report

Variant rs234343
Chromosome Location chr19:40464908-40464909
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:32 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:40453000-40466000 Weak transcription Fetal Intestine Small intestine
2 chr19:40457400-40475600 Weak transcription Breast Myoepithelial Primary Cells Breast
3 chr19:40458400-40466400 Enhancers Primary B cells from peripheral blood blood
4 chr19:40459600-40466200 Enhancers Primary B cells from cord blood blood
5 chr19:40460200-40474800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr19:40460400-40465000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
7 chr19:40460800-40476000 Weak transcription Psoas Muscle Psoas
8 chr19:40461400-40465000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr19:40461600-40465200 Weak transcription Primary T helper naive cells from peripheral blood blood
10 chr19:40461600-40475400 Weak transcription Brain Substantia Nigra brain
11 chr19:40461800-40465000 Weak transcription Fetal Thymus thymus
12 chr19:40462400-40466200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr19:40463400-40466400 Enhancers Primary T helper cells fromperipheralblood blood
14 chr19:40463600-40466400 Enhancers Primary T helper naive cells fromperipheralblood blood
15 chr19:40463800-40465000 Enhancers Primary T helper cells PMA-I stimulated --
16 chr19:40463800-40466400 Enhancers Primary T cells fromperipheralblood blood
17 chr19:40463800-40467400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
18 chr19:40464000-40465000 Weak transcription H9 Cell Line embryonic stem cell
19 chr19:40464000-40465000 Weak transcription HUES64 Cell Line embryonic stem cell
20 chr19:40464000-40465000 Weak transcription iPS-15b Cell Line embryonic stem cell
21 chr19:40464000-40465000 Weak transcription Primary T cells from cord blood blood
22 chr19:40464000-40465000 Weak transcription Primary T killer naive cells fromperipheralblood blood
23 chr19:40464000-40467200 Enhancers ES-I3 Cell Line embryonic stem cell
24 chr19:40464000-40467200 Enhancers HUES6 Cell Line embryonic stem cell
25 chr19:40464000-40475000 Weak transcription GM12878-XiMat blood
26 chr19:40464200-40465200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
27 chr19:40464800-40465000 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
28 chr19:40464800-40465400 Enhancers Primary T regulatory cells fromperipheralblood blood
29 chr19:40464800-40466200 Enhancers iPS-18 Cell Line embryonic stem cell
30 chr19:40464800-40466200 Enhancers Primary T helper 17 cells PMA-I stimulated --
31 chr19:40464800-40466400 Enhancers Primary T killer memory cells from peripheral blood blood
32 chr19:40464800-40467000 Enhancers ES-UCSF4 Cell Line embryonic stem cell

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Last update: Aug 31, 2015