Variant report
| Variant | rs9783938 |
|---|---|
| Chromosome Location | chr19:40549534-40549535 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr19:40542200-40549800 | Weak transcription | HSMMtube | muscle |
| 2 | chr19:40542600-40549800 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 3 | chr19:40543400-40549600 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 4 | chr19:40543800-40549800 | Weak transcription | Brain Angular Gyrus | brain |
| 5 | chr19:40547400-40549800 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 6 | chr19:40547800-40549600 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 7 | chr19:40548400-40549800 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 8 | chr19:40548400-40552400 | Weak transcription | Hela-S3 | cervix |
| 9 | chr19:40549000-40549800 | Strong transcription | Skeletal Muscle Male | skeletal muscle |
| 10 | chr19:40549000-40550000 | ZNF genes & repeats | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 11 | chr19:40549000-40550000 | ZNF genes & repeats | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 12 | chr19:40549000-40550000 | ZNF genes & repeats | Aorta | Aorta |
| 13 | chr19:40549000-40550000 | ZNF genes & repeats | Fetal Muscle Leg | muscle |
| 14 | chr19:40549000-40550200 | Strong transcription | Right Ventricle | heart |
| 15 | chr19:40549000-40550600 | ZNF genes & repeats | Ovary | ovary |
| 16 | chr19:40549000-40551200 | ZNF genes & repeats | Duodenum Mucosa | Duodenum |
| 17 | chr19:40549000-40551800 | ZNF genes & repeats | Adipose Nuclei | Adipose |
| 18 | chr19:40549000-40553200 | ZNF genes & repeats | H1 Cell Line | embryonic stem cell |
| 19 | chr19:40549000-40553200 | ZNF genes & repeats | iPS-20b Cell Line | embryonic stem cell |
| 20 | chr19:40549000-40553400 | ZNF genes & repeats | Fetal Lung | lung |
| 21 | chr19:40549000-40554200 | ZNF genes & repeats | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 22 | chr19:40549000-40554800 | ZNF genes & repeats | HUES48 Cell Line | embryonic stem cell |
| 23 | chr19:40549000-40556800 | ZNF genes & repeats | HUES6 Cell Line | embryonic stem cell |
| 24 | chr19:40549000-40556800 | ZNF genes & repeats | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 25 | chr19:40549000-40559800 | ZNF genes & repeats | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 26 | chr19:40549200-40549600 | ZNF genes & repeats | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 27 | chr19:40549200-40549600 | ZNF genes & repeats | Rectal Smooth Muscle | rectum |
| 28 | chr19:40549200-40549800 | Strong transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 29 | chr19:40549200-40550000 | ZNF genes & repeats | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 30 | chr19:40549200-40550000 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
| 31 | chr19:40549200-40550000 | ZNF genes & repeats | Primary monocytes fromperipheralblood | blood |
| 32 | chr19:40549200-40550000 | ZNF genes & repeats | Primary Natural Killer cells fromperipheralblood | blood |
| 33 | chr19:40549200-40550000 | ZNF genes & repeats | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 34 | chr19:40549200-40550000 | ZNF genes & repeats | Esophagus | oesophagus |
| 35 | chr19:40549200-40550000 | ZNF genes & repeats | Fetal Intestine Small | intestine |
| 36 | chr19:40549200-40550000 | ZNF genes & repeats | Fetal Stomach | stomach |
| 37 | chr19:40549200-40550000 | ZNF genes & repeats | Gastric | stomach |
| 38 | chr19:40549200-40550000 | ZNF genes & repeats | Left Ventricle | heart |
| 39 | chr19:40549200-40550000 | ZNF genes & repeats | Lung | lung |
| 40 | chr19:40549200-40550000 | ZNF genes & repeats | Pancreas | Pancrea |
| 41 | chr19:40549200-40550000 | Strong transcription | Rectal Mucosa Donor 31 | rectum |
| 42 | chr19:40549200-40550000 | ZNF genes & repeats | Spleen | Spleen |
| 43 | chr19:40549200-40550200 | Strong transcription | Fetal Adrenal Gland | Adrenal Gland |
| 44 | chr19:40549200-40550200 | Strong transcription | Stomach Smooth Muscle | stomach |
| 45 | chr19:40549200-40550600 | ZNF genes & repeats | IMR90 fetal lung fibroblasts Cell Line | lung |
| 46 | chr19:40549200-40550600 | ZNF genes & repeats | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 47 | chr19:40549200-40550600 | ZNF genes & repeats | Primary hematopoietic stem cells short term culture | blood |
| 48 | chr19:40549200-40550600 | ZNF genes & repeats | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 49 | chr19:40549200-40550600 | ZNF genes & repeats | Primary mononuclear cells fromperipheralblood | Blood |
| 50 | chr19:40549200-40550600 | ZNF genes & repeats | Sigmoid Colon | Sigmoid Colon |
