The 2.0 version of rSNPBase

Variant report

Variant rs337779
Chromosome Location chr19:40574561-40574562
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:29 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:40562600-40579200 Weak transcription Left Ventricle heart
2 chr19:40562600-40579400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr19:40566000-40580000 Weak transcription Fetal Heart heart
4 chr19:40570600-40579800 Weak transcription Brain Cingulate Gyrus brain
5 chr19:40571800-40578600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr19:40571800-40578800 Weak transcription Brain Germinal Matrix brain
7 chr19:40571800-40579200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr19:40571800-40579600 Weak transcription Stomach Smooth Muscle stomach
9 chr19:40572400-40578600 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr19:40572400-40578800 Weak transcription Breast Myoepithelial Primary Cells Breast
11 chr19:40572400-40578800 Weak transcription Rectal Mucosa Donor 31 rectum
12 chr19:40572400-40579600 Weak transcription Ovary ovary
13 chr19:40572400-40580000 Weak transcription Lung lung
14 chr19:40572400-40580000 Weak transcription Pancreas Pancrea
15 chr19:40572800-40579200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr19:40572800-40579200 Weak transcription Duodenum Smooth Muscle Duodenum
17 chr19:40573000-40579200 Weak transcription Fetal Brain Female brain
18 chr19:40573000-40579200 Weak transcription Skeletal Muscle Male skeletal muscle
19 chr19:40573000-40579400 Weak transcription Cortex derived primary cultured neurospheres brain
20 chr19:40573000-40580000 Weak transcription Brain Inferior Temporal Lobe brain
21 chr19:40573200-40574800 Weak transcription Skeletal Muscle Female skeletal muscle
22 chr19:40573400-40579200 Weak transcription Fetal Kidney kidney
23 chr19:40573600-40579000 Weak transcription HSMM muscle
24 chr19:40573800-40580000 Weak transcription Muscle Satellite Cultured Cells --
25 chr19:40574000-40579400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
26 chr19:40574000-40580000 Weak transcription Right Ventricle heart
27 chr19:40574400-40578600 Weak transcription Primary T helper cells PMA-I stimulated --
28 chr19:40574400-40580000 Weak transcription Rectal Smooth Muscle rectum
29 chr19:40574400-40582400 Weak transcription Fetal Stomach stomach

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Last update: Aug 31, 2015