The 2.0 version of rSNPBase

Variant report

Variant rs73545934
Chromosome Location chr19:40480550-40480551
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:40477800-40501800 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr19:40478000-40485600 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr19:40478200-40481400 Strong transcription ES-I3 Cell Line embryonic stem cell
4 chr19:40478200-40481600 Strong transcription Rectal Smooth Muscle rectum
5 chr19:40478200-40481800 Strong transcription Primary T cells from cord blood blood
6 chr19:40478200-40482000 Strong transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr19:40478200-40482000 Strong transcription Primary monocytes fromperipheralblood blood
8 chr19:40478200-40482200 Strong transcription Primary neutrophils fromperipheralblood blood
9 chr19:40478200-40482200 Strong transcription Fetal Lung lung
10 chr19:40478200-40488200 Strong transcription Thymus Thymus
11 chr19:40478200-40488400 Strong transcription Fetal Stomach stomach
12 chr19:40478200-40489200 Strong transcription HUES48 Cell Line embryonic stem cell
13 chr19:40478200-40489200 Strong transcription Primary B cells from cord blood blood
14 chr19:40478200-40489400 Strong transcription iPS-20b Cell Line embryonic stem cell
15 chr19:40478200-40489400 Strong transcription Monocytes-CD14+_RO01746 blood
16 chr19:40478200-40489600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
17 chr19:40478400-40480800 Strong transcription NHDF-Ad bronchial
18 chr19:40478400-40481000 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr19:40478400-40481000 Strong transcription Esophagus oesophagus
20 chr19:40478400-40481400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr19:40478400-40481400 Strong transcription A549 lung
22 chr19:40478400-40481600 Strong transcription Colonic Mucosa Colon
23 chr19:40478400-40481800 Strong transcription H1 Cell Line embryonic stem cell
24 chr19:40478400-40481800 Strong transcription iPS-15b Cell Line embryonic stem cell
25 chr19:40478400-40481800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr19:40478400-40481800 Strong transcription Primary hematopoietic stem cells short term culture blood
27 chr19:40478400-40481800 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
28 chr19:40478400-40481800 Strong transcription Muscle Satellite Cultured Cells --
29 chr19:40478400-40481800 Strong transcription Brain Cingulate Gyrus brain
30 chr19:40478400-40481800 Strong transcription Duodenum Mucosa Duodenum
31 chr19:40478400-40481800 Strong transcription Fetal Thymus thymus
32 chr19:40478400-40481800 Strong transcription Rectal Mucosa Donor 31 rectum
33 chr19:40478400-40481800 Strong transcription HUVEC blood vessel
34 chr19:40478400-40481800 Strong transcription NHEK skin
35 chr19:40478400-40481800 Strong transcription NHLF lung
36 chr19:40478400-40482000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
37 chr19:40478400-40482000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
38 chr19:40478400-40482000 Strong transcription Brain Hippocampus Middle brain
39 chr19:40478400-40482000 Strong transcription Brain Substantia Nigra brain
40 chr19:40478400-40482000 Strong transcription Fetal Intestine Large intestine
41 chr19:40478400-40482000 Strong transcription Placenta Placenta
42 chr19:40478400-40482000 Strong transcription Stomach Smooth Muscle stomach
43 chr19:40478400-40482000 Strong transcription HMEC breast
44 chr19:40478400-40482000 Strong transcription Osteobl bone
45 chr19:40478400-40482200 Strong transcription H9 Cell Line embryonic stem cell
46 chr19:40478400-40482200 Strong transcription Primary B cells from peripheral blood blood
47 chr19:40478400-40482200 Strong transcription Spleen Spleen
48 chr19:40478400-40482400 Strong transcription Cortex derived primary cultured neurospheres brain
49 chr19:40478400-40488000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr19:40478400-40488200 Strong transcription Fetal Muscle Trunk muscle

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Last update: Aug 31, 2015