Variant report

Variant rs8105066
Chromosome Location chr19:40489470-40489471
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:40477800-40501800 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr19:40478200-40489600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
3 chr19:40478400-40490000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr19:40478400-40490400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr19:40478400-40491000 Strong transcription Rectal Mucosa Donor 29 rectum
6 chr19:40478400-40491200 Weak transcription Fetal Heart heart
7 chr19:40478600-40489600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr19:40478600-40489600 Strong transcription Liver Liver
9 chr19:40478600-40489600 Strong transcription Duodenum Smooth Muscle Duodenum
10 chr19:40478600-40489800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
11 chr19:40478600-40490000 Strong transcription Skeletal Muscle Female skeletal muscle
12 chr19:40478600-40501800 Weak transcription Right Atrium heart
13 chr19:40479000-40490200 Strong transcription HSMMtube muscle
14 chr19:40479200-40490200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr19:40479600-40490200 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr19:40480400-40489600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
17 chr19:40481800-40490800 Weak transcription Stomach Mucosa stomach
18 chr19:40482800-40489600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr19:40482800-40489600 Strong transcription Cortex derived primary cultured neurospheres brain
20 chr19:40482800-40489800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
21 chr19:40482800-40490000 Strong transcription Primary T cells fromperipheralblood blood
22 chr19:40482800-40490000 Strong transcription Brain Hippocampus Middle brain
23 chr19:40482800-40490200 Strong transcription Osteobl bone
24 chr19:40483200-40489800 Strong transcription Muscle Satellite Cultured Cells --
25 chr19:40483200-40489800 Strong transcription Duodenum Mucosa Duodenum
26 chr19:40483200-40489800 Strong transcription HSMM muscle
27 chr19:40483200-40490000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr19:40483200-40490000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr19:40483200-40490400 Strong transcription Fetal Thymus thymus
30 chr19:40483800-40489600 Strong transcription NHDF-Ad bronchial
31 chr19:40483800-40489800 Strong transcription H1 Cell Line embryonic stem cell
32 chr19:40485400-40490000 Strong transcription Skeletal Muscle Male skeletal muscle
33 chr19:40485800-40494600 ZNF genes & repeats A549 lung
34 chr19:40486000-40489600 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
35 chr19:40486400-40489800 Weak transcription Primary T killer memory cells from peripheral blood blood
36 chr19:40486800-40490800 Weak transcription Primary T killer naive cells fromperipheralblood blood
37 chr19:40486800-40492800 Weak transcription Placenta Amnion Placenta Amnion
38 chr19:40487000-40489600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr19:40487200-40489800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr19:40487200-40490000 ZNF genes & repeats GM12878-XiMat blood
41 chr19:40487200-40499600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
42 chr19:40487400-40489800 Weak transcription Brain Substantia Nigra brain
43 chr19:40487400-40489800 Weak transcription HMEC breast
44 chr19:40487600-40489800 Weak transcription Psoas Muscle Psoas
45 chr19:40487600-40490000 Weak transcription Small Intestine intestine
46 chr19:40487600-40492200 Weak transcription Fetal Brain Male brain
47 chr19:40487600-40501800 Weak transcription Right Ventricle heart
48 chr19:40487800-40489600 Weak transcription Primary T cells from cord blood blood
49 chr19:40487800-40489600 Weak transcription Primary T helper naive cells from peripheral blood blood
50 chr19:40487800-40490000 Weak transcription Aorta Aorta

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