Variant report

Variant nsv3949
Chromosome Location chr3:111998512-112044060
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:1066 , 50 per page) page: 1 2 3 4 5 6 7 ... 22
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:111972200-111999000 Weak transcription Left Ventricle heart
2 chr3:111998600-111999400 Enhancers Fetal Intestine Large intestine
3 chr3:111999400-112000000 Weak transcription Fetal Intestine Large intestine
4 chr3:111999600-112000000 Enhancers Pancreatic Islets Pancreatic Islet
5 chr3:112000000-112000200 Enhancers Fetal Intestine Large intestine
6 chr3:112001800-112002400 Enhancers Breast Myoepithelial Primary Cells Breast
7 chr3:112002400-112004200 Weak transcription Breast Myoepithelial Primary Cells Breast
8 chr3:112002800-112003000 Flanking Active TSS GM12878-XiMat blood
9 chr3:112003000-112003400 Enhancers GM12878-XiMat blood
10 chr3:112003200-112003600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr3:112003200-112003600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr3:112003600-112004800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr3:112004200-112004800 Enhancers Breast Myoepithelial Primary Cells Breast
14 chr3:112004800-112005800 Weak transcription Breast Myoepithelial Primary Cells Breast
15 chr3:112005800-112006600 Enhancers Breast Myoepithelial Primary Cells Breast
16 chr3:112006000-112006200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
17 chr3:112006400-112006600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
18 chr3:112006600-112007200 Weak transcription Breast Myoepithelial Primary Cells Breast
19 chr3:112006600-112012400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr3:112007400-112010000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
21 chr3:112008200-112008800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr3:112008400-112008600 Enhancers ES-I3 Cell Line embryonic stem cell
23 chr3:112008400-112008600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
24 chr3:112008600-112012200 Weak transcription ES-I3 Cell Line embryonic stem cell
25 chr3:112008600-112012400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
26 chr3:112009800-112010000 ZNF genes & repeats Fetal Brain Male brain
27 chr3:112009800-112012400 Weak transcription Lung lung
28 chr3:112010000-112011600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr3:112010000-112012400 Weak transcription Fetal Brain Male brain
30 chr3:112010600-112010800 Enhancers GM12878-XiMat blood
31 chr3:112010800-112012000 Weak transcription GM12878-XiMat blood
32 chr3:112010800-112012200 Weak transcription Primary B cells from cord blood blood
33 chr3:112011600-112011800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
34 chr3:112011800-112012200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr3:112012000-112012200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr3:112012000-112012200 Enhancers Adipose Nuclei Adipose
37 chr3:112012000-112012200 Enhancers Duodenum Mucosa Duodenum
38 chr3:112012000-112012200 Enhancers Rectal Mucosa Donor 29 rectum
39 chr3:112012000-112012200 Enhancers GM12878-XiMat blood
40 chr3:112012200-112012400 Enhancers H9 Cell Line embryonic stem cell
41 chr3:112012200-112012400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr3:112012200-112012400 Enhancers HUES48 Cell Line embryonic stem cell
43 chr3:112012200-112012400 Enhancers HUES6 Cell Line embryonic stem cell
44 chr3:112012200-112012400 Enhancers HUES64 Cell Line embryonic stem cell
45 chr3:112012200-112012400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
46 chr3:112012200-112012400 Enhancers iPS-15b Cell Line embryonic stem cell
47 chr3:112012200-112012400 Enhancers iPS-18 Cell Line embryonic stem cell
48 chr3:112012200-112012400 Enhancers iPS-20b Cell Line embryonic stem cell
49 chr3:112012200-112012400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr3:112012200-112012400 Enhancers Primary monocytes fromperipheralblood blood

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