Variant report

Variant	nsv428520
Chromosome Location	chr8:88933423-89089323
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr8:88986720-88986877	K562	blood:	n/a	n/a
2	ATF1	chr8:88956780-88956816	K562	blood:	n/a	n/a
3	ATF1	chr8:88956057-88956257	K562	blood:	n/a	n/a
4	ATF1	chr8:89026780-89027102	K562	blood:	n/a	n/a
5	ATF3	chr8:89026864-89027036	K562	blood:	n/a	n/a
6	BACH1	chr8:88971890-88972200	H1-hESC	embryonic stem cell:	n/a	n/a
7	BHLHE40	chr8:88982992-88983479	K562	blood:	n/a	n/a
8	BHLHE40	chr8:88986260-88986727	K562	blood:	n/a	chr8:88986555-88986576 chr8:88986561-88986570 chr8:88986561-88986570
9	CCNT2	chr8:89011302-89011448	K562	blood:	n/a	n/a
10	CEBPB	chr8:89065449-89065812	Hela-S3	cervix:	n/a	chr8:89065628-89065637 chr8:89065628-89065637 chr8:89065626-89065637 chr8:89065628-89065637 chr8:89065628-89065637 chr8:89065626-89065639
11	CEBPB	chr8:89065367-89065959	MCF-7	breast:	n/a	chr8:89065628-89065637 chr8:89065628-89065637 chr8:89065626-89065637 chr8:89065628-89065637 chr8:89065628-89065637 chr8:89065626-89065639
12	CEBPB	chr8:88988193-88988487	IMR90	lung:	n/a	n/a
13	CEBPB	chr8:89065395-89065775	A549	lung:	n/a	chr8:89065628-89065637 chr8:89065628-89065637 chr8:89065626-89065637 chr8:89065628-89065637 chr8:89065628-89065637 chr8:89065626-89065639
14	CEBPB	chr8:89044518-89044815	H1-hESC	embryonic stem cell:	n/a	chr8:89044638-89044649
15	CEBPB	chr8:89065333-89065829	H1-hESC	embryonic stem cell:	n/a	chr8:89065628-89065637 chr8:89065628-89065637 chr8:89065626-89065637 chr8:89065628-89065637 chr8:89065628-89065637 chr8:89065626-89065639
16	CEBPB	chr8:88984088-88984372	A549	lung:	n/a	n/a
17	CEBPB	chr8:88984096-88984367	Hela-S3	cervix:	n/a	n/a
18	CEBPB	chr8:88957894-88958094	H1-hESC	embryonic stem cell:	n/a	n/a
19	CEBPB	chr8:89065438-89065821	IMR90	lung:	n/a	chr8:89065628-89065637 chr8:89065628-89065637 chr8:89065626-89065637 chr8:89065628-89065637 chr8:89065628-89065637 chr8:89065626-89065639
20	CEBPB	chr8:89065440-89065818	HepG2	liver:	n/a	chr8:89065628-89065637 chr8:89065628-89065637 chr8:89065626-89065637 chr8:89065628-89065637 chr8:89065628-89065637 chr8:89065626-89065639
21	CEBPB	chr8:89065371-89065803	MCF-7	breast:	n/a	chr8:89065628-89065637 chr8:89065628-89065637 chr8:89065626-89065637 chr8:89065628-89065637 chr8:89065628-89065637 chr8:89065626-89065639
22	CEBPB	chr8:89044509-89044773	K562	blood:	n/a	chr8:89044638-89044649
23	CEBPB	chr8:89065461-89065846	ECC-1	luminal epithelium:	n/a	chr8:89065628-89065637 chr8:89065628-89065637 chr8:89065626-89065637 chr8:89065628-89065637 chr8:89065628-89065637 chr8:89065626-89065639
24	CEBPB	chr8:89044498-89044796	HepG2	liver:	n/a	chr8:89044638-89044649
25	CEBPB	chr8:89044578-89044715	Hela-S3	cervix:	n/a	chr8:89044638-89044649
26	CEBPB	chr8:88990799-88990999	A549	lung:	n/a	n/a
27	CEBPB	chr8:89065381-89065833	ECC-1	luminal epithelium:	n/a	chr8:89065628-89065637 chr8:89065628-89065637 chr8:89065626-89065637 chr8:89065628-89065637 chr8:89065628-89065637 chr8:89065626-89065639
28	CEBPB	chr8:88950190-88950601	MCF-7	breast:	n/a	n/a
29	CEBPB	chr8:89033385-89033590	H1-hESC	embryonic stem cell:	n/a	n/a
30	CEBPB	chr8:89065420-89065747	A549	lung:	n/a	chr8:89065628-89065637 chr8:89065628-89065637 chr8:89065626-89065637 chr8:89065628-89065637 chr8:89065628-89065637 chr8:89065626-89065639
31	CEBPB	chr8:89026765-89027141	K562	blood:	n/a	n/a
32	CEBPB	chr8:89026743-89027104	K562	blood:	n/a	n/a
33	CEBPB	chr8:89026887-89027068	K562	blood:	n/a	n/a
34	CEBPB	chr8:88984008-88984297	MCF-7	breast:	n/a	n/a
35	CEBPB	chr8:89044468-89044796	IMR90	lung:	n/a	chr8:89044638-89044649
36	CEBPB	chr8:88988223-88988476	A549	lung:	n/a	n/a
37	CEBPB	chr8:89065350-89065880	HCT-116	colon:	n/a	chr8:89065628-89065637 chr8:89065628-89065637 chr8:89065626-89065637 chr8:89065628-89065637 chr8:89065628-89065637 chr8:89065626-89065639
38	CEBPB	chr8:88988219-88988436	HepG2	liver:	n/a	n/a
39	CEBPB	chr8:88984081-88984394	HepG2	liver:	n/a	n/a
40	CEBPB	chr8:88950239-88950535	IMR90	lung:	n/a	n/a
41	CEBPB	chr8:88984033-88984393	IMR90	lung:	n/a	n/a
42	CEBPB	chr8:89065433-89065825	K562	blood:	n/a	chr8:89065628-89065637 chr8:89065628-89065637 chr8:89065626-89065637 chr8:89065628-89065637 chr8:89065628-89065637 chr8:89065626-89065639
43	CEBPB	chr8:88984149-88984264	H1-hESC	embryonic stem cell:	n/a	n/a
44	CEBPB	chr8:89060908-89060934	A549	lung:	n/a	n/a
45	CEBPB	chr8:88984038-88984397	K562	blood:	n/a	n/a
46	CEBPB	chr8:89065442-89065814	A549	lung:	n/a	chr8:89065628-89065637 chr8:89065628-89065637 chr8:89065626-89065637 chr8:89065628-89065637 chr8:89065628-89065637 chr8:89065626-89065639
47	CHD2	chr8:89008699-89008773	GM12878	blood:	n/a	n/a
48	CHD2	chr8:89077180-89077304	H1-hESC	embryonic stem cell:	n/a	n/a
49	CTCF	chr8:89062319-89062371	LNCaP	prostate:	n/a	n/a
50	CTCF	chr8:89069660-89069810	HCFaa	heart:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr8:88984447-88984497	SK-N-SH_RA	brain:	n/a
2	chr8:88984447-88984497	PANC-1	pancreas:	n/a
3	chr8:89048264-89048314	HUVEC	blood vessel:	n/a
4	chr8:89053427-89053477	AG10803	skin:	n/a
5	chr8:89047821-89047871	HAEpiC	amniotic membrane:	n/a
6	chr8:89019480-89019530	IMR90	lung:	fetal
7	chr8:89053427-89053477	Hela-S3	cervix:	n/a
8	chr8:88972044-88972094	SK-N-MC	brain:	n/a
9	chr8:88972044-88972094	PFSK-1	brain:	n/a
10	chr8:89019480-89019530	HMEC	breast:	n/a
11	chr8:88984447-88984497	CMK	blood:	n/a
12	chr8:89053427-89053477	LNCaP	prostate:	n/a
13	chr8:89053427-89053477	ProgFib	skin:	n/a
14	chr8:89047821-89047871	BE2_C	brain:	n/a
15	chr8:88972044-88972094	HCF	heart:	n/a
16	chr8:88972044-88972094	ECC-1	luminal epithelium:	n/a
17	chr8:89019480-89019530	RPTEC	kidney:	n/a
18	chr8:89048264-89048314	MCF-7	breast:	n/a
19	chr8:89047821-89047871	AG04449	skin:	fetal
20	chr8:88984321-88984371	Jurkat	blood:	n/a
21	chr8:89053427-89053477	HCT-116	colon:	n/a
22	chr8:89053427-89053477	NH-A	brain:	n/a
23	chr8:89047821-89047871	PANC-1	pancreas:	n/a
24	chr8:89048264-89048314	H1-hESC	embryonic stem cell:	embryo
25	chr8:88984447-88984497	HAEpiC	amniotic membrane:	n/a
26	chr8:89019480-89019530	HL-60	blood:	n/a
27	chr8:88984321-88984371	HNPCEpiC	eye:	n/a
28	chr8:89019480-89019530	K562	blood:	n/a
29	chr8:88984447-88984497	Jurkat	blood:	n/a
30	chr8:89053427-89053477	HIPEpiC	eye:	n/a
31	chr8:89047821-89047871	HCT-116	colon:	n/a
32	chr8:89019480-89019530	HAEpiC	amniotic membrane:	n/a
33	chr8:89047821-89047871	ProgFib	skin:	n/a
34	chr8:89053427-89053477	SKMC	muscle:	n/a
35	chr8:88984447-88984497	HRE	kidney:	n/a
36	chr8:89019480-89019530	MCF10A-Er-Src	breast:	n/a
37	chr8:88984447-88984497	A549	lung:	n/a
38	chr8:89047821-89047871	A549	lung:	n/a
39	chr8:89047821-89047871	U87	brain:	n/a
40	chr8:89053427-89053477	HCPEpiC	choroid plexus:	n/a
41	chr8:88972044-88972094	HCPEpiC	choroid plexus:	n/a
42	chr8:89048264-89048314	LNCaP	prostate:	n/a
43	chr8:89048264-89048314	HEEpiC	esophagus:	n/a
44	chr8:89019480-89019530	AG09319	gingival:	n/a
45	chr8:88984321-88984371	HPAEpiC	pulmonary alveolar:	n/a
46	chr8:89048264-89048314	ovcar-3	ovarian:	n/a
47	chr8:89048264-89048314	ProgFib	skin:	n/a
48	chr8:88984447-88984497	SAEC	small airway:	n/a
49	chr8:88984321-88984371	CMK	blood:	n/a
50	chr8:89053427-89053477	ECC-1	luminal epithelium:	n/a

No.	Distal block	Cell Line	Cell type
1	chr8:88986747..88989132-chr8:89076384..89078794,2	MCF-7	breast:
2	chr8:89030805..89033293-chr8:89047239..89049566,2	K562	blood:
3	chr8:88991563..88994438-chr8:88996018..88998454,2	K562	blood:
4	chr8:89032654..89035413-chr8:89038300..89039860,2	K562	blood:
5	chr8:88991563..88994438-chr8:88996018..88998454,2	K562	blood:
6	chr8:88935295..88937297-chr8:88938050..88940246,2	MCF-7	breast:
7	chr8:89081737..89083503-chr8:89084105..89085905,2	MCF-7	breast:
8	chr8:89026745..89030002-chr8:89030399..89034596,3	K562	blood:
9	chr8:89085092..89086115-chr8:89301985..89302665,3	MCF-7	breast:
10	chr8:88945613..88947133-chr8:88952245..88954960,2	K562	blood:
11	chr8:88844023..88845076-chr8:89068948..89070439,5	MCF-7	breast:
12	chr8:88953944..88956078-chr8:88958944..88960542,2	MCF-7	breast:
13	chr8:89039797..89042561-chr8:89043064..89045852,2	MCF-7	breast:
14	chr8:89034312..89036822-chr8:89067332..89069474,2	MCF-7	breast:
15	chr6:26054042..26056771-chr8:88944821..88947355,2	MCF-7	breast:
16	chr8:88934395..88939175-chr8:88941122..88944272,4	K562	blood:
17	chr8:89081737..89083503-chr8:89084105..89085905,2	MCF-7	breast:
18	chr8:89039797..89042561-chr8:89043064..89045852,2	MCF-7	breast:
19	chr8:88935295..88937297-chr8:88938050..88940246,2	MCF-7	breast:
20	chr8:88593886..88594881-chr8:89069461..89070252,3	MCF-7	breast:
21	chr8:88953944..88956078-chr8:88958944..88960542,2	MCF-7	breast:
22	chr8:89039893..89042285-chr8:89048803..89051753,2	MCF-7	breast:
23	chr8:88945613..88947133-chr8:88952245..88954960,2	K562	blood:
24	chr8:89034312..89036822-chr8:89067332..89069474,2	MCF-7	breast:
25	chr8:89018606..89019180-chr8:89440797..89441298,2	MCF-7	breast:
26	chr8:88995159..88996901-chr8:88998562..89000818,2	K562	blood:
27	chr8:88995159..88996901-chr8:88998562..89000818,2	K562	blood:
28	chr8:89026745..89030002-chr8:89030399..89034596,3	K562	blood:
29	chr8:88985373..88987711-chr8:89022271..89025023,2	MCF-7	breast:
30	chr8:88984211..88986563-chr8:88988545..88990903,2	MCF-7	breast:
31	chr8:88934395..88939175-chr8:88941122..88944272,4	K562	blood:
32	chr8:88986256..88988013-chr8:88988534..88990430,2	K562	blood:
33	chr8:88949151..88949863-chr8:89301696..89302485,3	MCF-7	breast:
34	chr8:88986747..88989132-chr8:89076384..89078794,2	MCF-7	breast:
35	chr8:89032654..89035413-chr8:89038300..89039860,2	K562	blood:
36	chr8:89017125..89019742-chr8:89023197..89026619,3	MCF-7	breast:
37	chr8:89030805..89033293-chr8:89047239..89049566,2	K562	blood:
38	chr8:88883093..88885069-chr8:89007816..89009519,2	MCF-7	breast:
39	chr8:89039893..89042285-chr8:89048803..89051753,2	MCF-7	breast:
40	chr12:58138669..58140411-chr8:89009860..89012007,2	MCF-7	breast:
41	chr8:89017125..89019742-chr8:89023197..89026619,3	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CNBD1-3	chr8:89022371-89022434	NONHSAT127586
2	lnc-CNBD1-3	chr8:89022745-89022931	NONHSAT127586
3	lnc-CNBD1-3	chr8:89022745-89022931	ENSG00000253171.1
4	lnc-CNBD1-3	chr8:89015955-89016031	ENSG00000253171.1
5	lnc-CNBD1-3	chr8:89031284-89031341	ENSG00000253171.1
6	lnc-CNBD1-3	chr8:89031284-89031341	NONHSAT127586
7	lnc-CNBD1-3	chr8:88986393-88986535	NONHSAT127586
8	lnc-CNBD1-3	chr8:89024312-89024429	ENSG00000253171.1
9	lnc-DCAF4L2-1	chr8:88937964-88938285	XLOC_007145
10	lnc-CNBD1-3	chr8:89015955-89016031	NONHSAT127586
11	lnc-CNBD1-3	chr8:88986393-88986535	ENSG00000253171.1
12	lnc-DCAF4L2-3	chr8:89044244-89046790	NONHSAT127587
13	lnc-CNBD1-3	chr8:89023710-89024642	NONHSAT127586
14	lnc-DCAF4L2-1	chr8:88938374-88938489	XLOC_007145
15	lnc-CNBD1-3	chr8:89022371-89022434	ENSG00000253171.1

No.	miRNA target gene	miRNA name	Chromosome Location
1	MMP16	hsa-miR-146b-5p	chr8:89052202-89052230
2	MMP16	hsa-miR-146b-5p	chr8:89052424-89052446
3	MMP16	hsa-miR-31-5p	chr8:89051749-89051769
4	MMP16	hsa-miR-146b-5p	chr8:89052208-89052201

Variant related genes	Relation type
ENSG00000253171	TF binding region
ENSG00000253171	CpG island
ENSG00000135452	chromatin interactions
ENSG00000187837	chromatin interactions
ENSG00000253171	chromatin interactions

Extended variants
information (count: 4575 )
Associated
traits (count: 111 )

Variant overlapped rSNPs/rCNVs (count:4575 , 50 per page) page: 1 2 3 4 5 6 7 ... 92

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs145592338	chr8:88938060-88938061	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
2	rs563938987	chr8:88938061-88938062	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
3	rs116456451	chr8:88938087-88938088	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
4	rs564053681	chr8:88938090-88938091	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
5	rs528328357	chr8:88938166-88938167	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
6	rs540056186	chr8:88938191-88938192	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
7	rs147293329	chr8:88938198-88938199	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
8	rs11783447	chr8:88938201-88938202	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
9	rs58257363	chr8:88938252-88938253	Inactive region	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs373375892	chr8:88938395-88938396	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
11	rs377041362	chr8:88938413-88938414	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
12	rs567175881	chr8:88938417-88938418	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
13	rs533232641	chr8:88938443-88938444	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
14	rs73692200	chr8:88938612-88938613	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs151248651	chr8:88938679-88938680	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs183298510	chr8:88938683-88938684	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs369666156	chr8:88938711-88938712	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs566498782	chr8:88938780-88938781	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs540510119	chr8:88938789-88938790	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs558676471	chr8:88940807-88940808	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs34678376	chr8:88940820-88940821	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs375465065	chr8:88940835-88940836	Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs190266265	chr8:88940863-88940864	Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs376748857	chr8:88940915-88940916	Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs371700351	chr8:88940918-88940919	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs116956019	chr8:88940923-88940924	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs567136466	chr8:88940987-88940988	Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs538172202	chr8:88941032-88941033	Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs544630552	chr8:88941099-88941100	Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs144824816	chr8:88941120-88941121	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs571533007	chr8:88941123-88941124	Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs534766870	chr8:88941143-88941144	Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs184898912	chr8:88941194-88941195	Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs189572430	chr8:88941205-88941206	Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs552974181	chr8:88941236-88941237	Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs115560675	chr8:88941274-88941275	Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs180802623	chr8:88941308-88941309	Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs576335702	chr8:88941328-88941329	Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs185374987	chr8:88941334-88941335	Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs543381066	chr8:88941350-88941351	Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs148853653	chr8:88941374-88941375	Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs533468288	chr8:88941377-88941378	Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs532623273	chr8:88941387-88941388	Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs541277600	chr8:88941411-88941412	Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs58092272	chr8:88941642-88941643	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
46	rs527418651	chr8:88941695-88941696	Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs548783732	chr8:88941740-88941741	Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs567328080	chr8:88941748-88941749	Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs35838552	chr8:88941797-88941798	Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs371036548	chr8:88941807-88941808	Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:111)

Disease	PMID	Source
Wilms tumour	21544195	CNVD
Gastric cancer	17908304	CNVD
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Ewing''s sarcoma	21437220	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Liver carcinoma	19366792	CNVD
Seminomas	18059402	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Pancreatic cancer	21811587	CNVD
Thyroid cancer	19087340	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	17603634	CNVD
Testicular cancer	18059402	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Breast cancer	17133270	CNVD
Breast cancer	21509527	CNVD
Acute myeloid leukemia	20729466	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Cancer	20164919	CNVD
Esophageal cancer	20955586	CNVD
Multiple myeloma	16461302	CNVD
abnormal development	18461090	CNVD
Oral cancer	21386901	CNVD
Uveal melanoma	21693616	CNVD
Langer-Giedion syndrome	22283845	CNVD
Cancer	21637783	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	20632083	CNVD
Breast cancer	19602461	CNVD
Cancer	22429812	CNVD
Endometrial cancer	22040021	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oral cancer	19627613	CNVD
Prostate cancer	21088497	CNVD
colon cancer	17210682	CNVD
Breast cancer	21264507	CNVD
Breast cancer	22028636	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	16751803	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Gastric cancer	17167181	CNVD
Colorectal cancer	19359472	CNVD
Breast cancer	16461572	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
head and neck squamous cell carcinoma	18028549	CNVD
Breast cancer	17001317	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Ewing''s sarcoma	17952124	CNVD
Urothelial carcinoma	21177765	CNVD
Lung cancer	18438408	CNVD
Breast cancer	16608533	CNVD
Metanephric adenoma	20802469	CNVD
Hepatocellular carcinoma	18803288	CNVD
Prostate cancer	18632612	CNVD
Glioblastoma multiforme	18628472	CNVD
Ovarian cancer	22174824	CNVD
Prostate cancer	16573809	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Cancer	21949371	CNVD
Non-small cell lung cancer	21829676	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Acute myeloid leukemia	21358987	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Adenocarcinoma	21044232	CNVD
Squamous cell cancer	20885788	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Prostate cancer	16461572	CNVD
Breast cancer	21399628	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
small cell lung cancer	20016488	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Breast cancer	17393978	CNVD
Burkitt''s lymphoma	18698080	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Bladder cancer	19088036	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	17899364	CNVD
Acute myeloid leukemia	21251322	CNVD
Epilepsy	20502679	CNVD
Breast cancer	20409316	CNVD
Acute myeloid leukemia	19651601	CNVD
head and neck squamous cell carcinoma	19451471	CNVD
Renal cell carcinoma	18765545	CNVD
Basal cell lymphoma	17170743	CNVD
Cutaneous T-cell lymphoma	21881587	CNVD
Breast cancer	21611746	CNVD
Breast cancer	21364760	CNVD
Colorectal cancer	21645411	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD

Chromatin state (count:540 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:88938600-88938800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr8:88940800-88942600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr8:88942600-88947800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr8:88945800-88946200	Enhancers	Pancreatic Islets	Pancreatic Islet
5	chr8:88947800-88952000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr8:88948000-88949000	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
7	chr8:88948200-88952000	Enhancers	Osteobl	bone
8	chr8:88948600-88949000	Enhancers	NH-A	brain
9	chr8:88949000-88950400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
10	chr8:88949000-88950600	Weak transcription	NH-A	brain
11	chr8:88949400-88951800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr8:88949400-88952000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
13	chr8:88949600-88952400	Enhancers	HUVEC	blood vessel
14	chr8:88950000-88951400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
15	chr8:88950000-88951600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
16	chr8:88950000-88952800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
17	chr8:88950200-88951400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
18	chr8:88950200-88951400	Enhancers	NHDF-Ad	bronchial
19	chr8:88950200-88951600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
20	chr8:88950400-88951200	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
21	chr8:88950400-88951400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
22	chr8:88950400-88951800	Enhancers	ES-I3 Cell Line	embryonic stem cell
23	chr8:88950600-88951000	Enhancers	iPS-20b Cell Line	embryonic stem cell
24	chr8:88950600-88951600	Enhancers	NH-A	brain
25	chr8:88951200-88951400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
26	chr8:88951400-88952600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
27	chr8:88951400-88952800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
28	chr8:88951400-88952800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
29	chr8:88951600-88956000	Weak transcription	NH-A	brain
30	chr8:88951800-88955000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
31	chr8:88952000-88953200	Weak transcription	Osteobl	bone
32	chr8:88952800-88953000	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
33	chr8:88952800-88953000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
34	chr8:88952800-88954200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
35	chr8:88952800-88954800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
36	chr8:88953200-88953800	Enhancers	Osteobl	bone
37	chr8:88953800-88954200	Weak transcription	Osteobl	bone
38	chr8:88954200-88954400	Enhancers	Osteobl	bone
39	chr8:88954400-88955400	Weak transcription	Osteobl	bone
40	chr8:88954800-88955000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
41	chr8:88955000-88955600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
42	chr8:88955000-88955800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
43	chr8:88955400-88956000	Enhancers	Osteobl	bone
44	chr8:88955600-88955800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
45	chr8:88955800-88956200	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
46	chr8:88955800-88956600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
47	chr8:88956000-88956400	Flanking Active TSS	Osteobl	bone
48	chr8:88956000-88956600	Enhancers	NH-A	brain
49	chr8:88956200-88956800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
50	chr8:88956400-88956800	Enhancers	Osteobl	bone

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links