Variant report

Variant	nsv457139
Chromosome Location	chr15:51854718-51977159
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2101)
CpG islands
(count:1465)
Chromatin interactive
region (count:181)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2101 , 50 per page) page: 1 2 3 4 5 6 7 ... 43

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr15:51873449-51874120	K562	blood:	n/a	n/a
2	ARID3A	chr15:51912932-51913016	K562	blood:	n/a	n/a
3	ARID3A	chr15:51893648-51893900	K562	blood:	n/a	n/a
4	ARID3A	chr15:51965660-51965996	K562	blood:	n/a	n/a
5	ARID3A	chr15:51926895-51927114	K562	blood:	n/a	n/a
6	ARID3A	chr15:51939094-51939751	K562	blood:	n/a	n/a
7	ARID3A	chr15:51869305-51869743	K562	blood:	n/a	n/a
8	ARID3A	chr15:51872535-51873050	K562	blood:	n/a	n/a
9	ARID3A	chr15:51915628-51916287	K562	blood:	n/a	n/a
10	ARID3A	chr15:51895626-51895896	K562	blood:	n/a	n/a
11	ARID3A	chr15:51871485-51871486	K562	blood:	n/a	n/a
12	ARID3A	chr15:51914057-51914328	K562	blood:	n/a	n/a
13	ARID3A	chr15:51913407-51913677	K562	blood:	n/a	n/a
14	ARID3A	chr15:51870029-51870641	K562	blood:	n/a	n/a
15	ARID3A	chr15:51943840-51944929	K562	blood:	n/a	n/a
16	ATF1	chr15:51939313-51939872	K562	blood:	n/a	n/a
17	ATF1	chr15:51872652-51872968	K562	blood:	n/a	n/a
18	ATF1	chr15:51869224-51869631	K562	blood:	n/a	n/a
19	ATF1	chr15:51944242-51944903	K562	blood:	n/a	n/a
20	ATF1	chr15:51942165-51942440	K562	blood:	n/a	n/a
21	ATF1	chr15:51973437-51973899	K562	blood:	n/a	chr15:51973584-51973598
22	ATF1	chr15:51926916-51927167	K562	blood:	n/a	n/a
23	ATF1	chr15:51964374-51964827	K562	blood:	n/a	n/a
24	ATF1	chr15:51915722-51916114	K562	blood:	n/a	n/a
25	ATF2	chr15:51942038-51942440	GM12878	blood:	n/a	n/a
26	ATF2	chr15:51917308-51917935	GM12878	blood:	n/a	n/a
27	ATF2	chr15:51914116-51914796	GM12878	blood:	n/a	n/a
28	ATF2	chr15:51917219-51918018	GM12878	blood:	n/a	n/a
29	ATF3	chr15:51895627-51896150	K562	blood:	n/a	n/a
30	ATF3	chr15:51973405-51973799	K562	blood:	n/a	chr15:51973587-51973607 chr15:51973759-51973768
31	ATF3	chr15:51939278-51939725	K562	blood:	n/a	n/a
32	ATF3	chr15:51892411-51892760	K562	blood:	n/a	n/a
33	BACH1	chr15:51939410-51939672	K562	blood:	n/a	n/a
34	BACH1	chr15:51915616-51916109	K562	blood:	n/a	n/a
35	BACH1	chr15:51893743-51893893	K562	blood:	n/a	n/a
36	BACH1	chr15:51907534-51907617	H1-hESC	embryonic stem cell:	n/a	n/a
37	BACH1	chr15:51914113-51914733	H1-hESC	embryonic stem cell:	n/a	n/a
38	BACH1	chr15:51915019-51915548	H1-hESC	embryonic stem cell:	n/a	n/a
39	BACH1	chr15:51973550-51974054	H1-hESC	embryonic stem cell:	n/a	n/a
40	BACH1	chr15:51964468-51964470	H1-hESC	embryonic stem cell:	n/a	n/a
41	BATF	chr15:51892416-51892715	GM12878	blood:	n/a	chr15:51892572-51892583
42	BCL11A	chr15:51914213-51914609	GM12878	blood:	n/a	n/a
43	BCL11A	chr15:51917337-51917861	GM12878	blood:	n/a	n/a
44	BCL11A	chr15:51917428-51917689	GM12878	blood:	n/a	n/a
45	BCL3	chr15:51921286-51921652	GM12878	blood:	n/a	n/a
46	BCL3	chr15:51921286-51921581	GM12878	blood:	n/a	n/a
47	BCL3	chr15:51914303-51914883	GM12878	blood:	n/a	n/a
48	BCL3	chr15:51914363-51915166	A549	lung:	n/a	chr15:51915134-51915147 chr15:51914934-51914947 chr15:51914930-51914943 chr15:51914933-51914942 chr15:51914930-51914939 chr15:51914931-51914944
49	BCLAF1	chr15:51914100-51914752	GM12878	blood:	n/a	n/a
50	BCLAF1	chr15:51917370-51917848	GM12878	blood:	n/a	n/a

(count:1465 , 50 per page) page: 1 2 3 4 5 6 7 ... 30

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:51973534-51973584	HMEC	breast:	n/a
2	chr15:51973534-51973584	HMEC	breast:	n/a
3	chr15:51914168-51914218	GM12891	blood:	n/a
4	chr15:51973920-51973970	SKMC	muscle:	n/a
5	chr15:51973661-51973711	PFSK-1	brain:	n/a
6	chr15:51947756-51947806	NB4	blood:	n/a
7	chr15:51973460-51973510	NHBE	bronchial:	n/a
8	chr15:51973460-51973510	IMR90	lung:	fetal
9	chr15:51915035-51915085	HRCEpiC	kidney:	n/a
10	chr15:51973224-51973274	HAEpiC	amniotic membrane:	n/a
11	chr15:51972699-51972749	NHBE	bronchial:	n/a
12	chr15:51973199-51973249	NH-A	brain:	n/a
13	chr15:51913620-51913670	HCPEpiC	choroid plexus:	n/a
14	chr15:51914952-51915002	AG04450	lung:	fetal
15	chr15:51910925-51910975	HRE	kidney:	n/a
16	chr15:51915395-51915445	HRE	kidney:	n/a
17	chr15:51964706-51964756	CMK	blood:	n/a
18	chr15:51914292-51914342	HCT-116	colon:	n/a
19	chr15:51973764-51973814	HAEpiC	amniotic membrane:	n/a
20	chr15:51973199-51973249	ovcar-3	ovarian:	n/a
21	chr15:51972699-51972749	NHDF-neo	bronchial:	n/a
22	chr15:51913620-51913670	HNPCEpiC	eye:	n/a
23	chr15:51973460-51973510	HL-60	blood:	n/a
24	chr15:51915087-51915137	GM06990	blood:	n/a
25	chr15:51947756-51947806	U87	brain:	n/a
26	chr15:51973591-51973641	BE2_C	brain:	n/a
27	chr15:51973661-51973711	HCPEpiC	choroid plexus:	n/a
28	chr15:51973534-51973584	BE2_C	brain:	n/a
29	chr15:51914952-51915002	GM12892	blood:	n/a
30	chr15:51973224-51973274	HCT-116	colon:	n/a
31	chr15:51914952-51915002	HCM	heart:	n/a
32	chr15:51914292-51914342	SAEC	small airway:	n/a
33	chr15:51915370-51915420	HRCEpiC	kidney:	n/a
34	chr15:51973224-51973274	HL-60	blood:	n/a
35	chr15:51910925-51910975	HUVEC	blood vessel:	n/a
36	chr15:51915087-51915137	HNPCEpiC	eye:	n/a
37	chr15:51973661-51973711	AG04450	lung:	fetal
38	chr15:51973199-51973249	AG09319	gingival:	n/a
39	chr15:51914292-51914342	Caco-2	colon:	n/a
40	chr15:51918170-51918220	GM19239	blood:	n/a
41	chr15:51914292-51914342	HEEpiC	esophagus:	n/a
42	chr15:51914292-51914342	NH-A	brain:	n/a
43	chr15:51970968-51971018	NHBE	bronchial:	n/a
44	chr15:51915413-51915463	AG09309	skin:	n/a
45	chr15:51973534-51973584	NHDF-neo	bronchial:	n/a
46	chr15:51973920-51973970	HCF	heart:	n/a
47	chr15:51913620-51913670	AG10803	skin:	n/a
48	chr15:51915035-51915085	SK-N-SH	brain:	n/a
49	chr15:51913620-51913670	HRCEpiC	kidney:	n/a
50	chr15:51973224-51973274	AG09309	skin:	n/a

(count:181 , 50 per page) page: 1 2 3 4

No.	Distal block	Cell Line	Cell type
1	chr15:51870256..51872104-chr15:51873625..51875575,3	K562	blood:
2	chr15:51960322..51962005-chr15:52066189..52068560,2	MCF-7	breast:
3	chr15:51945649..51948145-chr15:51951610..51953731,2	K562	blood:
4	chr15:51850776..51853114-chr15:51857190..51858738,2	K562	blood:
5	chr15:51867811..51869730-chr15:51913400..51915633,2	MCF-7	breast:
6	chr15:51938680..51944458-chr15:52065543..52071230,9	K562	blood:
7	chr15:51861248..51863140-chr15:51914368..51916557,2	MCF-7	breast:
8	chr15:51828880..51829850-chr15:51865800..51866794,7	MCF-7	breast:
9	chr15:51939565..51943710-chr15:52029015..52031702,3	MCF-7	breast:
10	chr15:51854337..51857092-chr15:51860809..51862898,2	K562	blood:
11	chr15:51901591..51903124-chr15:51906602..51908630,2	MCF-7	breast:
12	chr15:51909586..51911705-chr15:51923357..51924958,2	K562	blood:
13	chr15:51859933..51862256-chr15:51866857..51869173,2	MCF-7	breast:
14	chr15:51934747..51936336-chr15:52066593..52068125,2	MCF-7	breast:
15	chr15:51923873..51926717-chr15:51934100..51936928,2	MCF-7	breast:
16	chr15:51892230..51894821-chr15:51920226..51922010,2	K562	blood:
17	chr15:51880703..51883110-chr15:51892306..51895178,2	MCF-7	breast:
18	chr15:51922833..51924465-chr15:51927296..51928941,2	MCF-7	breast:
19	chr15:51913842..51915651-chr15:52310480..52312908,3	MCF-7	breast:
20	chr15:51893271..51898734-chr15:51911463..51916763,7	K562	blood:
21	chr15:51860984..51863229-chr15:51878270..51880253,2	MCF-7	breast:
22	chr15:51890575..51893742-chr15:52120649..52123561,3	MCF-7	breast:
23	chr15:51859502..51861947-chr15:52073735..52076540,2	MCF-7	breast:
24	chr15:51880604..51882848-chr15:51911429..51913182,2	K562	blood:
25	chr15:51950953..51953753-chr15:52026333..52028408,2	MCF-7	breast:
26	chr15:51974418..51976599-chr15:51979066..51980619,2	K562	blood:
27	chr15:51975005..51977651-chr15:51984880..51987418,3	K562	blood:
28	chr15:51904892..51907829-chr15:51916271..51917973,2	MCF-7	breast:
29	chr15:51893271..51898734-chr15:51911463..51916763,7	K562	blood:
30	chr15:51870572..51873309-chr15:51873394..51875007,2	MCF-7	breast:
31	chr15:51914680..51916767-chr15:51938237..51940151,2	MCF-7	breast:
32	chr15:51891895..51894416-chr15:51910395..51912936,2	MCF-7	breast:
33	chr15:51895386..51897033-chr15:51913625..51916763,3	K562	blood:
34	chr15:51942260..51942806-chr15:52519301..52520236,2	K562	blood:
35	chr15:51976547..51978091-chr15:52028258..52031013,2	MCF-7	breast:
36	chr15:51877838..51880078-chr15:51913640..51915227,2	MCF-7	breast:
37	chr15:51944344..51944987-chr15:52068324..52069242,2	K562	blood:
38	chr15:51898533..51902972-chr15:51911457..51915866,6	MCF-7	breast:
39	chr15:51828885..51829774-chr15:51881790..51882666,5	MCF-7	breast:
40	chr15:51942152..51942788-chr15:52431755..52432640,2	K562	blood:
41	chr15:51898533..51902972-chr15:51911457..51915866,6	MCF-7	breast:
42	chr15:51940521..51942581-chr15:52121824..52123791,2	MCF-7	breast:
43	chr15:51870256..51872104-chr15:51873625..51875575,3	K562	blood:
44	chr15:51938171..51940025-chr15:52042843..52045224,2	K562	blood:
45	chr15:51914529..51916927-chr15:52121179..52124043,2	MCF-7	breast:
46	chr15:51893271..51895082-chr15:51912831..51915334,2	K562	blood:
47	chr15:51972403..51976508-chr15:51976780..51980487,4	K562	blood:
48	chr15:51887772..51889993-chr15:51908818..51910938,2	MCF-7	breast:
49	chr15:51901451..51903803-chr15:51912032..51914694,2	K562	blood:
50	chr15:51915278..51917337-chr15:51922529..51924335,2	K562	blood:

No data

Variant related genes	Relation type
ENSG00000263437	TF binding region
SCG3	TF binding region
DMXL2	TF binding region
ENSG00000263437	CpG island
SCG3	CpG island
DMXL2	CpG island
ENSG00000128872	chromatin interactions
ENSG00000104093	chromatin interactions
ENSG00000267302	chromatin interactions
ENSG00000189050	chromatin interactions
ENSG00000187742	chromatin interactions
ENSG00000140280	chromatin interactions
ENSG00000065621	chromatin interactions
ENSG00000259377	chromatin interactions
ENSG00000166477	chromatin interactions
ENSG00000138594	chromatin interactions
ENSG00000259438	chromatin interactions
ENSG00000069966	chromatin interactions
ENSG00000137842	chromatin interactions
ENSG00000069956	chromatin interactions
ENSG00000104112	chromatin interactions
ENSG00000242110	chromatin interactions
ENSG00000263437	chromatin interactions
ENSG00000198513	chromatin interactions

Extended variants
information (count: 4311 )
Associated
traits (count: 58 )

Variant overlapped rSNPs/rCNVs (count:4311 , 50 per page) page: 1 2 3 4 5 6 7 ... 87

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs8028518	chr15:51854718-51854719	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs369904539	chr15:51854746-51854747	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs79648496	chr15:51854751-51854752	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs577244722	chr15:51854793-51854794	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs541350988	chr15:51854820-51854821	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs559363128	chr15:51854841-51854842	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs186263375	chr15:51854846-51854847	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs541517812	chr15:51854939-51854940	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs61514213	chr15:51855001-51855002	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs531806973	chr15:51855119-51855120	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs377750117	chr15:51855159-51855160	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs73401415	chr15:51855162-51855163	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs113394205	chr15:51855202-51855203	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs190088433	chr15:51855205-51855206	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs373091795	chr15:51855238-51855239	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs537788039	chr15:51855255-51855256	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs565896853	chr15:51855265-51855266	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs536691518	chr15:51855313-51855314	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs548390320	chr15:51855320-51855321	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs375498287	chr15:51855337-51855338	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs182148279	chr15:51855368-51855369	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs558750612	chr15:51855395-51855396	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs558431344	chr15:51855396-51855397	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs570680179	chr15:51855420-51855421	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs372284360	chr15:51855427-51855428	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs534866967	chr15:51855450-51855451	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs187256523	chr15:51855494-51855495	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs368648922	chr15:51855536-51855537	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs200890286	chr15:51855553-51855554	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs190836043	chr15:51855554-51855555	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs369037093	chr15:51855619-51855620	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs552916814	chr15:51855631-51855632	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs376516526	chr15:51855642-51855643	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs369646107	chr15:51855658-51855659	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs113684584	chr15:51855694-51855695	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs115928815	chr15:51855697-51855698	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs575329393	chr15:51855712-51855713	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs545517210	chr15:51855733-51855734	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs369741542	chr15:51855748-51855749	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs532579514	chr15:51855758-51855759	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs541317087	chr15:51855781-51855782	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs140877638	chr15:51855834-51855835	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs535812402	chr15:51855868-51855869	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs116596092	chr15:51855875-51855876	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs548598914	chr15:51855903-51855904	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs11632853	chr15:51855933-51855934	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
47	rs28648597	chr15:51856066-51856067	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
48	rs144840123	chr15:51856084-51856085	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs112904662	chr15:51856091-51856092	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs371571798	chr15:51856100-51856101	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:58)

Disease	PMID	Source
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Testicular germ cell tumor	18059402	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Melanoma	18172304	CNVD
Colorectal cancer	16774939	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
Intellectual disability	22102821	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Prostate cancer	16573809	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	21785460	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Prostate cancer	18632612	CNVD
small cell lung cancer	20016488	CNVD
Basal cell lymphoma	17053054	CNVD
Breast cancer	22032731	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Hirschsprung''s Disease	21712996	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Cancer	21129771	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Abnormal phenotypes	18644119	CNVD
Cancer	16751803	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Breast cancer	21364760	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Myelofibrosis	22110671	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD

Chromatin state (count:1377 , 50 per page) page: 1 2 3 4 5 6 7 ... 28

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:51776800-51855200	Weak transcription	Thymus	Thymus
2	chr15:51780400-51855800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
3	chr15:51781400-51863000	Weak transcription	HSMM	muscle
4	chr15:51787400-51855400	Weak transcription	Osteobl	bone
5	chr15:51794600-51861000	Weak transcription	Gastric	stomach
6	chr15:51809000-51854800	Weak transcription	Brain Hippocampus Middle	brain
7	chr15:51816000-51861000	Weak transcription	Pancreas	Pancrea
8	chr15:51817800-51862200	Weak transcription	Fetal Brain Male	brain
9	chr15:51818200-51855400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
10	chr15:51818200-51861600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
11	chr15:51818400-51861200	Weak transcription	Fetal Stomach	stomach
12	chr15:51819600-51861400	Weak transcription	Fetal Muscle Trunk	muscle
13	chr15:51819800-51863000	Weak transcription	Right Ventricle	heart
14	chr15:51824600-51855000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
15	chr15:51824600-51860600	Weak transcription	Brain Anterior Caudate	brain
16	chr15:51824600-51861000	Weak transcription	Left Ventricle	heart
17	chr15:51824800-51863200	Weak transcription	Primary hematopoietic stem cells	blood
18	chr15:51827000-51861600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
19	chr15:51827400-51859800	Weak transcription	Fetal Intestine Small	intestine
20	chr15:51828600-51861200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
21	chr15:51828800-51868000	Weak transcription	Adipose Nuclei	Adipose
22	chr15:51828800-51868200	Weak transcription	Fetal Intestine Large	intestine
23	chr15:51829000-51855200	Weak transcription	Stomach Smooth Muscle	stomach
24	chr15:51829000-51856000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
25	chr15:51829000-51857000	Weak transcription	NHDF-Ad	bronchial
26	chr15:51829000-51859800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
27	chr15:51829000-51861000	Weak transcription	Fetal Lung	lung
28	chr15:51829000-51868800	Weak transcription	A549	lung
29	chr15:51829200-51861000	Weak transcription	Placenta	Placenta
30	chr15:51829400-51860600	Weak transcription	Fetal Brain Female	brain
31	chr15:51829400-51863200	Weak transcription	Dnd41	blood
32	chr15:51830000-51861000	Weak transcription	K562	blood
33	chr15:51831400-51868800	Weak transcription	Rectal Mucosa Donor 31	rectum
34	chr15:51836400-51861400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
35	chr15:51836800-51858000	Weak transcription	Liver	Liver
36	chr15:51836800-51869000	Weak transcription	Rectal Mucosa Donor 29	rectum
37	chr15:51839400-51868600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
38	chr15:51846600-51861000	Weak transcription	HepG2	liver
39	chr15:51849600-51861000	Weak transcription	Spleen	Spleen
40	chr15:51850600-51861000	Weak transcription	Duodenum Mucosa	Duodenum
41	chr15:51850800-51867400	Weak transcription	Cortex derived primary cultured neurospheres	brain
42	chr15:51851400-51868200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
43	chr15:51851800-51865600	Weak transcription	Primary neutrophils fromperipheralblood	blood
44	chr15:51852000-51856200	Strong transcription	Primary monocytes fromperipheralblood	blood
45	chr15:51852200-51854800	Weak transcription	Primary T cells from cord blood	blood
46	chr15:51852600-51861000	Strong transcription	Monocytes-CD14+_RO01746	blood
47	chr15:51853400-51855400	Strong transcription	Duodenum Smooth Muscle	Duodenum
48	chr15:51853800-51861000	Weak transcription	Lung	lung
49	chr15:51853800-51861200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
50	chr15:51853800-51861600	Weak transcription	Sigmoid Colon	Sigmoid Colon

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links