Variant report

Variant	nsv462492
Chromosome Location	chr5:154489393-154523910
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr5:154519210-154519417	HepG2	liver:	n/a	n/a
2	ATF2	chr5:154518953-154519555	H1-hESC	embryonic stem cell:	n/a	n/a
3	ATF2	chr5:154519117-154519541	H1-hESC	embryonic stem cell:	n/a	n/a
4	ATF3	chr5:154519154-154519447	K562	blood:	n/a	n/a
5	BCL3	chr5:154500163-154500515	GM12878	blood:	n/a	n/a
6	BHLHE40	chr5:154519311-154519466	GM12878	blood:	n/a	n/a
7	BHLHE40	chr5:154519254-154519431	K562	blood:	n/a	n/a
8	BRCA1	chr5:154519221-154519496	Hela-S3	cervix:	n/a	n/a
9	BRCA1	chr5:154519220-154519473	H1-hESC	embryonic stem cell:	n/a	n/a
10	CBX3	chr5:154495137-154495421	K562	blood:	n/a	n/a
11	CEBPB	chr5:154523634-154523649	HepG2	liver:	n/a	n/a
12	CEBPB	chr5:154500630-154500828	K562	blood:	n/a	chr5:154500700-154500711
13	CEBPB	chr5:154500571-154500863	HepG2	liver:	n/a	chr5:154500700-154500711
14	CEBPB	chr5:154500599-154500873	IMR90	lung:	n/a	chr5:154500700-154500711
15	CHD2	chr5:154519190-154519359	GM12878	blood:	n/a	n/a
16	CTCF	chr5:154519280-154519430	HPAF	blood vessel:	n/a	chr5:154519351-154519369 chr5:154519353-154519374 chr5:154519354-154519367 chr5:154519352-154519368 chr5:154519354-154519362
17	CTCF	chr5:154519240-154519390	HBMEC	blood vessel:	n/a	chr5:154519351-154519369 chr5:154519353-154519374 chr5:154519354-154519367 chr5:154519352-154519368 chr5:154519354-154519362
18	CTCF	chr5:154519230-154519481	GM10266	blood:	n/a	chr5:154519351-154519369 chr5:154519353-154519374 chr5:154519354-154519367 chr5:154519352-154519368 chr5:154519354-154519362
19	CTCF	chr5:154519260-154519410	GM12864	blood:	n/a	chr5:154519351-154519369 chr5:154519353-154519374 chr5:154519354-154519367 chr5:154519352-154519368 chr5:154519354-154519362
20	CTCF	chr5:154519280-154519430	HMF	breast:	n/a	chr5:154519351-154519369 chr5:154519353-154519374 chr5:154519354-154519367 chr5:154519352-154519368 chr5:154519354-154519362
21	CTCF	chr5:154519157-154519528	K562	blood:	n/a	chr5:154519351-154519369 chr5:154519353-154519374 chr5:154519354-154519367 chr5:154519352-154519368 chr5:154519354-154519362
22	CTCF	chr5:154519260-154519410	HAc	cerebellar:	n/a	chr5:154519351-154519369 chr5:154519353-154519374 chr5:154519354-154519367 chr5:154519352-154519368 chr5:154519354-154519362
23	CTCF	chr5:154518979-154519164	GM12892	blood:	n/a	chr5:154519102-154519110
24	CTCF	chr5:154519034-154519514	HCT-116	colon:	n/a	chr5:154519351-154519369 chr5:154519353-154519374 chr5:154519354-154519367 chr5:154519102-154519110 chr5:154519352-154519368 chr5:154519354-154519362
25	CTCF	chr5:154519245-154519454	GM13976	blood:	n/a	chr5:154519351-154519369 chr5:154519353-154519374 chr5:154519354-154519367 chr5:154519352-154519368 chr5:154519354-154519362
26	CTCF	chr5:154519340-154519490	HFF-Myc	foreskin:	n/a	chr5:154519351-154519369 chr5:154519353-154519374 chr5:154519354-154519367 chr5:154519352-154519368 chr5:154519354-154519362
27	CTCF	chr5:154519260-154519410	HA-sp	spinal cord:	n/a	chr5:154519351-154519369 chr5:154519353-154519374 chr5:154519354-154519367 chr5:154519352-154519368 chr5:154519354-154519362
28	CTCF	chr5:154519080-154519230	SK-N-SH_RA	brain:	n/a	chr5:154519102-154519110
29	CTCF	chr5:154519280-154519430	GM06990	blood:	n/a	chr5:154519351-154519369 chr5:154519353-154519374 chr5:154519354-154519367 chr5:154519352-154519368 chr5:154519354-154519362
30	CTCF	chr5:154519260-154519410	BE2_C	brain:	n/a	chr5:154519351-154519369 chr5:154519353-154519374 chr5:154519354-154519367 chr5:154519352-154519368 chr5:154519354-154519362
31	CTCF	chr5:154519158-154519508	ProgFib	skin:	n/a	chr5:154519351-154519369 chr5:154519353-154519374 chr5:154519354-154519367 chr5:154519352-154519368 chr5:154519354-154519362
32	CTCF	chr5:154519175-154519519	T-47D	breast:	n/a	chr5:154519351-154519369 chr5:154519353-154519374 chr5:154519354-154519367 chr5:154519352-154519368 chr5:154519354-154519362
33	CTCF	chr5:154519300-154519450	A549	lung:	n/a	chr5:154519351-154519369 chr5:154519353-154519374 chr5:154519354-154519367 chr5:154519352-154519368 chr5:154519354-154519362
34	CTCF	chr5:154519280-154519430	RPTEC	kidney:	n/a	chr5:154519351-154519369 chr5:154519353-154519374 chr5:154519354-154519367 chr5:154519352-154519368 chr5:154519354-154519362
35	CTCF	chr5:154519114-154519540	A549	lung:	n/a	chr5:154519351-154519369 chr5:154519353-154519374 chr5:154519354-154519367 chr5:154519352-154519368 chr5:154519354-154519362
36	CTCF	chr5:154519260-154519410	WI-38	lung:	n/a	chr5:154519351-154519369 chr5:154519353-154519374 chr5:154519354-154519367 chr5:154519352-154519368 chr5:154519354-154519362
37	CTCF	chr5:154519208-154519498	LNCaP	prostate:	n/a	chr5:154519351-154519369 chr5:154519353-154519374 chr5:154519354-154519367 chr5:154519352-154519368 chr5:154519354-154519362
38	CTCF	chr5:154518960-154519110	GM12865	blood:	n/a	chr5:154519102-154519110
39	CTCF	chr5:154519260-154519410	GM12873	blood:	n/a	chr5:154519351-154519369 chr5:154519353-154519374 chr5:154519354-154519367 chr5:154519352-154519368 chr5:154519354-154519362
40	CTCF	chr5:154519320-154519470	HAc	cerebellar:	n/a	chr5:154519351-154519369 chr5:154519353-154519374 chr5:154519354-154519367 chr5:154519352-154519368 chr5:154519354-154519362
41	CTCF	chr5:154519240-154519390	NB4	blood:	n/a	chr5:154519351-154519369 chr5:154519353-154519374 chr5:154519354-154519367 chr5:154519352-154519368 chr5:154519354-154519362
42	CTCF	chr5:154519300-154519450	HepG2	liver:	n/a	chr5:154519351-154519369 chr5:154519353-154519374 chr5:154519354-154519367 chr5:154519352-154519368 chr5:154519354-154519362
43	CTCF	chr5:154519300-154519450	SAEC	small airway:	n/a	chr5:154519351-154519369 chr5:154519353-154519374 chr5:154519354-154519367 chr5:154519352-154519368 chr5:154519354-154519362
44	CTCF	chr5:154519240-154519390	NHDF-neo	bronchial:	n/a	chr5:154519351-154519369 chr5:154519353-154519374 chr5:154519354-154519367 chr5:154519352-154519368 chr5:154519354-154519362
45	CTCF	chr5:154519300-154519450	GM06990	blood:	n/a	chr5:154519351-154519369 chr5:154519353-154519374 chr5:154519354-154519367 chr5:154519352-154519368 chr5:154519354-154519362
46	CTCF	chr5:154518920-154519070	AG09309	skin:	n/a	n/a
47	CTCF	chr5:154519320-154519470	GM12864	blood:	n/a	chr5:154519351-154519369 chr5:154519353-154519374 chr5:154519354-154519367 chr5:154519352-154519368 chr5:154519354-154519362
48	CTCF	chr5:154519260-154519410	HCM	heart:	n/a	chr5:154519351-154519369 chr5:154519353-154519374 chr5:154519354-154519367 chr5:154519352-154519368 chr5:154519354-154519362
49	CTCF	chr5:154518860-154519010	WI-38	lung:	n/a	n/a
50	CTCF	chr5:154519240-154519390	GM12866	blood:	n/a	chr5:154519351-154519369 chr5:154519353-154519374 chr5:154519354-154519367 chr5:154519352-154519368 chr5:154519354-154519362

No.	Distal block	Cell Line	Cell type
1	chr5:154506367..154508431-chr5:154515848..154518550,2	MCF-7	breast:
2	chr5:154485065..154487069-chr5:154488163..154490065,2	K562	blood:
3	chr5:154475458..154478110-chr5:154501032..154502578,2	MCF-7	breast:
4	chr5:154506367..154508431-chr5:154515848..154518550,2	MCF-7	breast:
5	chr2:155228044..155228643-chr5:154493315..154494007,2	MCF-7	breast:
6	chr5:154446911..154448825-chr5:154517075..154518990,2	MCF-7	breast:
7	chr5:154479393..154481556-chr5:154490178..154491823,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-KIF4B-1	chr5:154496110-154496238	NONHSAT104728
2	lnc-KIF4B-1	chr5:154498161-154498261	FPKM1_group_26577_transcript_2
3	lnc-KIF4B-1	chr5:154498995-154499314	NONHSAT104729
4	lnc-KIF4B-1	chr5:154498162-154498242	NONHSAT104729
5	lnc-KIF4B-1	chr5:154496110-154496238	FPKM1_group_26577_transcript_2
6	lnc-KIF4B-1	chr5:154498161-154499170	NONHSAT104728
7	lnc-KIF4B-1	chr5:154496130-154496238	NONHSAT104729

Variant related genes	Relation type
ENSG00000253646	TF binding region

Extended variants
information (count: 1216 )
Associated
traits (count: 88 )

Variant overlapped rSNPs/rCNVs (count:1216 , 50 per page) page: 1 2 3 4 5 6 7 ... 25

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs1549647	chr5:154489393-154489394	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs188512015	chr5:154489401-154489402	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs1008795	chr5:154489437-154489438	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs112958802	chr5:154489450-154489451	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs182721240	chr5:154489522-154489523	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs530086098	chr5:154489540-154489541	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs1549648	chr5:154489546-154489547	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
8	rs566948941	chr5:154489578-154489579	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs532804661	chr5:154489580-154489581	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs552809704	chr5:154489632-154489633	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs1985783	chr5:154489646-154489647	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs12188764	chr5:154489652-154489653	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs13172264	chr5:154489683-154489684	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
14	rs555743529	chr5:154489684-154489685	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs574179769	chr5:154489685-154489686	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs12187203	chr5:154489718-154489719	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
17	rs148671808	chr5:154489719-154489720	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs552649298	chr5:154489722-154489723	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs139875493	chr5:154489765-154489766	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs373447592	chr5:154489768-154489769	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs553472618	chr5:154489770-154489771	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs558414085	chr5:154489794-154489795	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs12187210	chr5:154489797-154489798	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
24	rs577348637	chr5:154489820-154489821	Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs12188773	chr5:154489839-154489840	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
26	rs561150196	chr5:154489846-154489847	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs530096082	chr5:154489896-154489897	Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs540720973	chr5:154489920-154489921	Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs113457067	chr5:154489921-154489922	Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs532537751	chr5:154489944-154489945	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs78082915	chr5:154490006-154490007	Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs569544962	chr5:154490113-154490114	Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs532061344	chr5:154490126-154490127	Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs576661614	chr5:154490155-154490156	Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs75642114	chr5:154490156-154490157	Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs75048508	chr5:154490173-154490174	Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs78855017	chr5:154490239-154490240	Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs561076975	chr5:154490241-154490242	Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs191748276	chr5:154490256-154490257	Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs142159485	chr5:154490269-154490270	Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs76464548	chr5:154490350-154490351	Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs370814953	chr5:154490357-154490358	Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs575159713	chr5:154490385-154490386	Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs151187290	chr5:154490411-154490412	Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs554418672	chr5:154490423-154490424	Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs574569439	chr5:154490424-154490425	Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs540091702	chr5:154490491-154490492	Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs528415285	chr5:154490511-154490512	Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs577438684	chr5:154490517-154490518	Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs544946354	chr5:154490538-154490539	Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:88)

Disease	PMID	Source
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Medulloblastoma	21979893	CNVD
Phyllodes tumor	17334353	CNVD
Malaria	21533027	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	20164919	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	16751803	CNVD
Intellectual disability	22102821	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Melanoma	18172304	CNVD
Glioma	20126413	CNVD
Cancer	22429812	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Liposarcoma	21253554	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Breast cancer	21858162	CNVD
Leukemia	17361228	CNVD
Myelodysplastic syndrome	18508791	CNVD
5q-syndrome	17576883	CNVD
Gastric cancer	17908304	CNVD
Lung cancer	16740712	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Urothelial carcinoma	21177765	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Barrett''s syndrome	19417022	CNVD
Lung cancer	18438408	CNVD
Thyroid cancer	19087340	CNVD
Breast cancer	21785460	CNVD
Breast cancer	17133270	CNVD
Acute myeloid leukemia	20729466	CNVD
lymphocytic leukemia	21291569	CNVD
Myelodysplastic syndrome	21251322	CNVD
Acute myeloid leukemia	21251322	CNVD
Multiple myeloma	17550852	CNVD
Salivary gland tumor	18059337	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Renal cell carcinoma	19377443	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Renal cell carcinoma	18194544	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Renal cell carcinoma	18592004	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Congenital anomalies of the kidney and urinary tract	18316590	CNVD
Embryonal rhabdomyosarcoma	16790082	CNVD
T-cell lymphomas	19863542	CNVD
Breast cancer	17603634	CNVD
Hepatocellular carcinoma	16750200	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Prostate cancer	18632612	CNVD
Myelofibrosis	22110671	CNVD
Deafness	19353646	CNVD
Developmental delay	19353646	CNVD
dysmorphism	19353646	CNVD
feeding difficulties	19353646	CNVD
strabismus	19353646	CNVD
Gastric adenocarcinoma	19115996	CNVD
Esophageal squamous carcinoma	17470683	CNVD
Epilepsy	20502679	CNVD
Renal cell carcinoma	21215367	CNVD

Chromatin state (count:81 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:154486800-154489800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr5:154489800-154490600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr5:154490600-154494200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr5:154492200-154495800	Weak transcription	Placenta Amnion	Placenta Amnion
5	chr5:154494000-154494800	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr5:154494200-154494800	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr5:154495200-154495600	Bivalent/Poised TSS	A549	lung
8	chr5:154495400-154496800	Enhancers	HepG2	liver
9	chr5:154495800-154496800	Enhancers	Placenta Amnion	Placenta Amnion
10	chr5:154496200-154496400	Enhancers	HSMMtube	muscle
11	chr5:154496400-154496600	Enhancers	Fetal Heart	heart
12	chr5:154496400-154496800	Flanking Active TSS	HSMMtube	muscle
13	chr5:154496600-154498400	Weak transcription	Fetal Heart	heart
14	chr5:154496800-154497000	Active TSS	HSMMtube	muscle
15	chr5:154498400-154498800	Enhancers	Fetal Heart	heart
16	chr5:154504800-154505000	Enhancers	Fetal Muscle Leg	muscle
17	chr5:154504800-154505400	Enhancers	Psoas Muscle	Psoas
18	chr5:154505000-154506800	Enhancers	Fetal Heart	heart
19	chr5:154505200-154506200	Weak transcription	Fetal Muscle Leg	muscle
20	chr5:154505200-154506400	Enhancers	Pancreas	Pancrea
21	chr5:154505600-154506400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
22	chr5:154506200-154506800	Enhancers	Fetal Muscle Leg	muscle
23	chr5:154506400-154508800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
24	chr5:154506800-154515200	Weak transcription	Fetal Heart	heart
25	chr5:154508200-154509800	Enhancers	NHEK	skin
26	chr5:154508400-154508600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
27	chr5:154508400-154509600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
28	chr5:154508400-154509800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
29	chr5:154508600-154509200	Flanking Active TSS	A549	lung
30	chr5:154508600-154512200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
31	chr5:154508800-154509200	Enhancers	HMEC	breast
32	chr5:154509000-154509200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
33	chr5:154509000-154509400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
34	chr5:154509200-154509600	Enhancers	A549	lung
35	chr5:154512000-154514400	Enhancers	Ovary	ovary
36	chr5:154512200-154513400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
37	chr5:154512600-154513000	Enhancers	Pancreatic Islets	Pancreatic Islet
38	chr5:154512800-154513600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
39	chr5:154513400-154517200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
40	chr5:154515200-154517200	Enhancers	Fetal Heart	heart
41	chr5:154515800-154516600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
42	chr5:154516000-154516200	Enhancers	Right Atrium	heart
43	chr5:154516000-154516400	Enhancers	ES-WA7 Cell Line	embryonic stem cell
44	chr5:154516000-154516400	Enhancers	H1 Cell Line	embryonic stem cell
45	chr5:154516000-154516400	Enhancers	H9 Cell Line	embryonic stem cell
46	chr5:154516000-154519000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
47	chr5:154516200-154518800	Weak transcription	Right Atrium	heart
48	chr5:154516600-154517200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
49	chr5:154517200-154517400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
50	chr5:154517200-154517400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links