Variant report

Variant	nsv463907
Chromosome Location	chr6:81047559-81075912
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BACH1	chr6:81047978-81048274	H1-hESC	embryonic stem cell:	n/a	n/a
2	BACH1	chr6:81047866-81047969	K562	blood:	n/a	n/a
3	CEBPB	chr6:81066381-81066581	A549	lung:	n/a	chr6:81066452-81066465 chr6:81066452-81066463 chr6:81066454-81066465
4	CEBPB	chr6:81066313-81066634	IMR90	lung:	n/a	chr6:81066452-81066465 chr6:81066452-81066463 chr6:81066454-81066465
5	CEBPB	chr6:81066292-81066590	K562	blood:	n/a	chr6:81066452-81066465 chr6:81066452-81066463 chr6:81066454-81066465
6	CEBPB	chr6:81066326-81066613	Hela-S3	cervix:	n/a	chr6:81066452-81066465 chr6:81066452-81066463 chr6:81066454-81066465
7	CEBPB	chr6:81051052-81051360	IMR90	lung:	n/a	chr6:81051065-81051076
8	CEBPB	chr6:81066303-81066621	HepG2	liver:	n/a	chr6:81066452-81066465 chr6:81066452-81066463 chr6:81066454-81066465
9	CHD2	chr6:81047983-81048302	H1-hESC	embryonic stem cell:	n/a	n/a
10	CHD2	chr6:81052649-81052770	H1-hESC	embryonic stem cell:	n/a	n/a
11	CTCF	chr6:81048031-81048265	GM10248	blood:	n/a	chr6:81048147-81048165 chr6:81048150-81048163 chr6:81048150-81048159 chr6:81048152-81048162 chr6:81048149-81048170
12	CTCF	chr6:81047863-81048424	SK-N-SH	brain:	n/a	chr6:81048147-81048165 chr6:81048150-81048163 chr6:81048150-81048159 chr6:81048152-81048162 chr6:81048149-81048170
13	CTCF	chr6:81047760-81047910	SAEC	small airway:	n/a	n/a
14	CTCF	chr6:81047980-81048270	NHLF	lung:	n/a	chr6:81048147-81048165 chr6:81048150-81048163 chr6:81048150-81048159 chr6:81048152-81048162 chr6:81048149-81048170
15	CTCF	chr6:81048120-81048270	MCF-7	breast:	n/a	chr6:81048147-81048165 chr6:81048150-81048163 chr6:81048150-81048159 chr6:81048152-81048162 chr6:81048149-81048170
16	CTCF	chr6:81048060-81048210	K562	blood:	n/a	chr6:81048147-81048165 chr6:81048150-81048163 chr6:81048150-81048159 chr6:81048152-81048162 chr6:81048149-81048170
17	CTCF	chr6:81048018-81048275	GM12891	blood:	n/a	chr6:81048147-81048165 chr6:81048150-81048163 chr6:81048150-81048159 chr6:81048152-81048162 chr6:81048149-81048170
18	CTCF	chr6:81048076-81048260	Lung_OC	lung:	n/a	chr6:81048147-81048165 chr6:81048150-81048163 chr6:81048150-81048159 chr6:81048152-81048162 chr6:81048149-81048170
19	CTCF	chr6:81048080-81048230	HMEC	breast:	n/a	chr6:81048147-81048165 chr6:81048150-81048163 chr6:81048150-81048159 chr6:81048152-81048162 chr6:81048149-81048170
20	CTCF	chr6:81048100-81048250	HRE	kidney:	n/a	chr6:81048147-81048165 chr6:81048150-81048163 chr6:81048150-81048159 chr6:81048152-81048162 chr6:81048149-81048170
21	CTCF	chr6:81048040-81048190	HBMEC	blood vessel:	n/a	chr6:81048147-81048165 chr6:81048150-81048163 chr6:81048150-81048159 chr6:81048152-81048162 chr6:81048149-81048170
22	CTCF	chr6:81048080-81048230	GM12872	blood:	n/a	chr6:81048147-81048165 chr6:81048150-81048163 chr6:81048150-81048159 chr6:81048152-81048162 chr6:81048149-81048170
23	CTCF	chr6:81048080-81048230	Caco-2	colon:	n/a	chr6:81048147-81048165 chr6:81048150-81048163 chr6:81048150-81048159 chr6:81048152-81048162 chr6:81048149-81048170
24	CTCF	chr6:81048100-81048250	GM12865	blood:	n/a	chr6:81048147-81048165 chr6:81048150-81048163 chr6:81048150-81048159 chr6:81048152-81048162 chr6:81048149-81048170
25	CTCF	chr6:81048060-81048210	HUVEC	blood vessel:	n/a	chr6:81048147-81048165 chr6:81048150-81048163 chr6:81048150-81048159 chr6:81048152-81048162 chr6:81048149-81048170
26	CTCF	chr6:81048040-81048258	ProgFib	skin:	n/a	chr6:81048147-81048165 chr6:81048150-81048163 chr6:81048150-81048159 chr6:81048152-81048162 chr6:81048149-81048170
27	CTCF	chr6:81048080-81048230	RPTEC	kidney:	n/a	chr6:81048147-81048165 chr6:81048150-81048163 chr6:81048150-81048159 chr6:81048152-81048162 chr6:81048149-81048170
28	CTCF	chr6:81048068-81048257	LNCaP	prostate:	n/a	chr6:81048147-81048165 chr6:81048150-81048163 chr6:81048150-81048159 chr6:81048152-81048162 chr6:81048149-81048170
29	CTCF	chr6:81048008-81048294	MCF-7	breast:	n/a	chr6:81048147-81048165 chr6:81048150-81048163 chr6:81048150-81048159 chr6:81048152-81048162 chr6:81048149-81048170
30	CTCF	chr6:81047916-81048312	A549	lung:	n/a	chr6:81048147-81048165 chr6:81048150-81048163 chr6:81048150-81048159 chr6:81048152-81048162 chr6:81048149-81048170
31	CTCF	chr6:81048000-81048150	HFF-Myc	foreskin:	n/a	n/a
32	CTCF	chr6:81048060-81048210	GM12865	blood:	n/a	chr6:81048147-81048165 chr6:81048150-81048163 chr6:81048150-81048159 chr6:81048152-81048162 chr6:81048149-81048170
33	CTCF	chr6:81047796-81047899	GM10248	blood:	n/a	n/a
34	CTCF	chr6:81048100-81048250	GM06990	blood:	n/a	chr6:81048147-81048165 chr6:81048150-81048163 chr6:81048150-81048159 chr6:81048152-81048162 chr6:81048149-81048170
35	CTCF	chr6:81047940-81048090	A549	lung:	n/a	n/a
36	CTCF	chr6:81048051-81048263	GM20000	blood:	n/a	chr6:81048147-81048165 chr6:81048150-81048163 chr6:81048150-81048159 chr6:81048152-81048162 chr6:81048149-81048170
37	CTCF	chr6:81048060-81048210	HRPEpiC	eye:	n/a	chr6:81048147-81048165 chr6:81048150-81048163 chr6:81048150-81048159 chr6:81048152-81048162 chr6:81048149-81048170
38	CTCF	chr6:81048108-81048283	A549	lung:	n/a	chr6:81048147-81048165 chr6:81048150-81048163 chr6:81048150-81048159 chr6:81048152-81048162 chr6:81048149-81048170
39	CTCF	chr6:81048080-81048230	AG10803	skin:	n/a	chr6:81048147-81048165 chr6:81048150-81048163 chr6:81048150-81048159 chr6:81048152-81048162 chr6:81048149-81048170
40	CTCF	chr6:81048048-81048268	LNCaP	prostate:	n/a	chr6:81048147-81048165 chr6:81048150-81048163 chr6:81048150-81048159 chr6:81048152-81048162 chr6:81048149-81048170
41	CTCF	chr6:81069297-81069331	GM20000	blood:	n/a	n/a
42	CTCF	chr6:81047750-81048354	GM12878	blood:	n/a	chr6:81048147-81048165 chr6:81048150-81048163 chr6:81048150-81048159 chr6:81048152-81048162 chr6:81048149-81048170
43	CTCF	chr6:81048080-81048230	MCF-7	breast:	n/a	chr6:81048147-81048165 chr6:81048150-81048163 chr6:81048150-81048159 chr6:81048152-81048162 chr6:81048149-81048170
44	CTCF	chr6:81048043-81048260	HepG2	liver:	n/a	chr6:81048147-81048165 chr6:81048150-81048163 chr6:81048150-81048159 chr6:81048152-81048162 chr6:81048149-81048170
45	CTCF	chr6:81047981-81048254	T-47D	breast:	n/a	chr6:81048147-81048165 chr6:81048150-81048163 chr6:81048150-81048159 chr6:81048152-81048162 chr6:81048149-81048170
46	CTCF	chr6:81048060-81048210	A549	lung:	n/a	chr6:81048147-81048165 chr6:81048150-81048163 chr6:81048150-81048159 chr6:81048152-81048162 chr6:81048149-81048170
47	CTCF	chr6:81048080-81048230	HCPEpiC	choroid plexus:	n/a	chr6:81048147-81048165 chr6:81048150-81048163 chr6:81048150-81048159 chr6:81048152-81048162 chr6:81048149-81048170
48	CTCF	chr6:81048049-81048283	HepG2	liver:	n/a	chr6:81048147-81048165 chr6:81048150-81048163 chr6:81048150-81048159 chr6:81048152-81048162 chr6:81048149-81048170
49	CTCF	chr6:81047949-81048375	IMR90	lung:	n/a	chr6:81048147-81048165 chr6:81048150-81048163 chr6:81048150-81048159 chr6:81048152-81048162 chr6:81048149-81048170
50	CTCF	chr6:81047812-81047847	Medullo	brain:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr6:81073810..81075490-chr6:81078179..81079720,2	K562	blood:
2	chr6:80842428..80843336-chr6:81048460..81049369,2	MCF-7	breast:
3	chr6:81048632..81050136-chr6:81059450..81061569,2	K562	blood:
4	chr6:81047806..81048624-chr6:81314824..81315362,2	MCF-7	breast:
5	chr6:81047988..81048553-chr6:81186140..81186935,2	MCF-7	breast:
6	chr6:81047941..81048548-chr6:82463318..82463845,3	K562	blood:
7	chr6:81047724..81048347-chr6:82463313..82464141,2	MCF-7	breast:
8	chr6:81069036..81071236-chr6:81098177..81100852,2	K562	blood:
9	chr6:81032325..81034991-chr6:81050067..81051684,2	K562	blood:
10	chr6:81047651..81048631-chr6:81237581..81238534,2	MCF-7	breast:
11	chr6:81048632..81050136-chr6:81059450..81061569,2	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-BCKDHB-3	chr6:81065141-81066576	ENSG00000272129.1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	BCKDHB	hsa-miR-1	chr6:81054571-81054592
2	BCKDHB	hsa-miR-1	chr6:81055812-81055831

Variant related genes	Relation type
ENSG00000272129	TF binding region
BCKDHB	TF binding region

Extended variants
information (count: 1191 )
Associated
traits (count: 105 )

Variant overlapped rSNPs/rCNVs (count:1191 , 50 per page) page: 1 2 3 4 5 6 7 ... 24

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs61093983	chr6:81047559-81047560	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs376703183	chr6:81047643-81047644	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs191839137	chr6:81047650-81047651	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs554083769	chr6:81047746-81047747	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs577505720	chr6:81047763-81047764	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs544848223	chr6:81047764-81047765	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs577105012	chr6:81047785-81047786	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs184453764	chr6:81047786-81047787	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs546014829	chr6:81047816-81047817	Enhancers Weak transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
10	rs556284651	chr6:81047823-81047824	Enhancers Weak transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
11	rs150342812	chr6:81047847-81047848	Enhancers Weak transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
12	rs576523458	chr6:81047862-81047863	Enhancers Weak transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
13	rs189177853	chr6:81047894-81047895	Enhancers Weak transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
14	rs542316401	chr6:81047947-81047948	Enhancers Weak transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
15	rs193212552	chr6:81047988-81047989	Enhancers Weak transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
16	rs557378248	chr6:81047999-81048000	Enhancers Weak transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
17	rs527729300	chr6:81048009-81048010	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
18	rs541424162	chr6:81048021-81048022	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
19	rs542356320	chr6:81048044-81048045	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
20	rs560473155	chr6:81048062-81048063	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
21	rs2179841	chr6:81048078-81048079	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
22	rs552465739	chr6:81048107-81048108	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
23	rs2179840	chr6:81048110-81048111	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
24	rs2179839	chr6:81048113-81048114	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
25	rs548314691	chr6:81048114-81048115	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
26	rs568054795	chr6:81048125-81048126	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
27	rs2322756	chr6:81048136-81048137	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
28	rs546964319	chr6:81048159-81048160	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
29	rs570083788	chr6:81048214-81048215	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs531512210	chr6:81048215-81048216	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs2223874	chr6:81048244-81048245	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
32	rs556539146	chr6:81048246-81048247	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs138142443	chr6:81048250-81048251	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs3805862	chr6:81048251-81048252	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
35	rs528891965	chr6:81048268-81048269	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs2223873	chr6:81048288-81048289	Weak transcription Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs142625428	chr6:81048316-81048317	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
38	rs145940303	chr6:81048337-81048338	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
39	rs565483880	chr6:81048342-81048343	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
40	rs564488695	chr6:81048348-81048349	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
41	rs376549841	chr6:81048366-81048367	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
42	rs578043464	chr6:81048384-81048385	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
43	rs2207142	chr6:81048417-81048418	Weak transcription Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
44	rs185611074	chr6:81048476-81048477	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
45	rs552504952	chr6:81048486-81048487	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
46	rs531576496	chr6:81048507-81048508	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
47	rs138550788	chr6:81048516-81048517	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
48	rs561846970	chr6:81048530-81048531	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
49	rs188958927	chr6:81048543-81048544	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
50	rs34610880	chr6:81048652-81048653	Weak transcription	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a

Variant related diseases (count:105)

Disease	PMID	Source
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Autism	22495311	CNVD
Gastric cancer	17908304	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	17603634	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Systemic lupus erythematosus	17503323	CNVD
Melanoma	18172304	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Cancer	21637783	CNVD
Colorectal cancer	16272173	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
T-cell lymphomas	19863542	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	19010834	CNVD
Non-small cell lung cancer	21044232	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21385341	CNVD
Prostate cancer	16705090	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Ependymoma	16718352	CNVD
High-proliferative meningiomas	17937814	CNVD
Intracranial tumor	16823260	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Prostate cancer	16573809	CNVD
Breast cancer	16272173	CNVD
small cell lung cancer	20016488	CNVD
Prostate cancer	18632612	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Urothelial carcinoma	18382360	CNVD
Ovarian neoplasms	16753589	CNVD
Hepatocellular carcinoma	16750200	CNVD
Wilms tumour	21544195	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Follicular lymphoma	17699855	CNVD
Breast cancer	17133270	CNVD
Leukemia	18688285	CNVD
Prostate cancer	19242612	CNVD
Developmental delay	21147756	CNVD
Glioma	21046410	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Zellweger syndrome	21572526	CNVD
Follicular lymphoma	20505157	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Malignant melanoma	18718029	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Lung adenocarcinoma	21935476	CNVD
Breast cancer	21364760	CNVD
Myelofibrosis	22110671	CNVD
Salivary gland tumor	18059337	CNVD
Lung cancer	16773561	CNVD
Glioblastoma multiforme	22286061	CNVD
Urothelial cell carcinoma	18451213	CNVD
Prostate cancer	16461572	CNVD
Mental retardation	21045960	CNVD
Obesity	21045960	CNVD
learning difficulties	21045960	CNVD
Prostate cancer	17245344	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Cancer	20164920	CNVD
Burkitt''s lymphoma	20823134	CNVD
Ductal carcinoma	22052326	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
Acute lymphoblastic leukemia	17640729	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:170 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:81005200-81056200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr6:81029400-81079600	Weak transcription	HSMM	muscle
3	chr6:81033800-81070200	Weak transcription	Left Ventricle	heart
4	chr6:81042200-81056400	Weak transcription	Fetal Heart	heart
5	chr6:81044400-81048000	Weak transcription	Fetal Brain Female	brain
6	chr6:81044400-81050200	Weak transcription	Fetal Kidney	kidney
7	chr6:81045200-81047800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr6:81045200-81047800	Weak transcription	Primary hematopoietic stem cells	blood
9	chr6:81045200-81047800	Weak transcription	Aorta	Aorta
10	chr6:81045200-81048000	Weak transcription	Fetal Stomach	stomach
11	chr6:81045200-81051000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
12	chr6:81045600-81047800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
13	chr6:81045600-81047800	Weak transcription	HUES6 Cell Line	embryonic stem cell
14	chr6:81045600-81047800	Weak transcription	Liver	Liver
15	chr6:81045600-81051200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
16	chr6:81045800-81052600	Weak transcription	Osteobl	bone
17	chr6:81046600-81047600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
18	chr6:81046600-81047600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
19	chr6:81046600-81050400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
20	chr6:81046800-81047600	Weak transcription	HUES48 Cell Line	embryonic stem cell
21	chr6:81046800-81051400	Weak transcription	Pancreatic Islets	Pancreatic Islet
22	chr6:81047000-81048000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
23	chr6:81047000-81051200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
24	chr6:81047200-81047600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
25	chr6:81047200-81048200	Weak transcription	HUVEC	blood vessel
26	chr6:81047200-81048400	Enhancers	HUES64 Cell Line	embryonic stem cell
27	chr6:81047600-81047800	Enhancers	H1 Cell Line	embryonic stem cell
28	chr6:81047600-81048000	Enhancers	HUES48 Cell Line	embryonic stem cell
29	chr6:81047600-81048000	Weak transcription	Psoas Muscle	Psoas
30	chr6:81047600-81048400	Enhancers	iPS-20b Cell Line	embryonic stem cell
31	chr6:81047600-81048600	Enhancers	iPS-15b Cell Line	embryonic stem cell
32	chr6:81047600-81048600	Enhancers	iPS-18 Cell Line	embryonic stem cell
33	chr6:81047800-81048000	Enhancers	ES-I3 Cell Line	embryonic stem cell
34	chr6:81047800-81048000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
35	chr6:81047800-81048000	Enhancers	Primary hematopoietic stem cells	blood
36	chr6:81047800-81048000	Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
37	chr6:81047800-81048000	Active TSS	Aorta	Aorta
38	chr6:81047800-81048400	Enhancers	Liver	Liver
39	chr6:81047800-81048600	Enhancers	HUES6 Cell Line	embryonic stem cell
40	chr6:81048000-81048200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
41	chr6:81048000-81048200	Flanking Active TSS	Aorta	Aorta
42	chr6:81048000-81048200	Enhancers	Fetal Brain Female	brain
43	chr6:81048000-81048200	Enhancers	Fetal Stomach	stomach
44	chr6:81048000-81048200	Enhancers	Pancreas	Pancrea
45	chr6:81048000-81048200	Enhancers	Psoas Muscle	Psoas
46	chr6:81048000-81048400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
47	chr6:81048200-81048400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
48	chr6:81048200-81048400	Enhancers	HUVEC	blood vessel
49	chr6:81048200-81049200	Weak transcription	Fetal Stomach	stomach
50	chr6:81048200-81058000	Weak transcription	Psoas Muscle	Psoas

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links