Variant report

Variant nsv467213
Chromosome Location chr10:55662089-55725234
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:55658600-55663000 Weak transcription NHEK skin
2 chr10:55661400-55662200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr10:55662000-55662200 Enhancers Fetal Intestine Small intestine
4 chr10:55662000-55662200 Enhancers Fetal Kidney kidney
5 chr10:55662800-55663200 Enhancers iPS-15b Cell Line embryonic stem cell
6 chr10:55662800-55663200 Enhancers iPS-18 Cell Line embryonic stem cell
7 chr10:55662800-55663200 Enhancers iPS-20b Cell Line embryonic stem cell
8 chr10:55662800-55664000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr10:55662800-55664400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr10:55663000-55665200 Enhancers NHEK skin
11 chr10:55663200-55664400 Enhancers HMEC breast
12 chr10:55664000-55664200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr10:55664000-55665000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr10:55664200-55665400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr10:55664400-55664800 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr10:55664400-55664800 Active TSS HMEC breast
17 chr10:55664400-55665000 Enhancers ES-I3 Cell Line embryonic stem cell
18 chr10:55664800-55665200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr10:55664800-55665400 Enhancers HMEC breast
20 chr10:55665000-55673800 Weak transcription ES-I3 Cell Line embryonic stem cell
21 chr10:55665200-55665600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr10:55677600-55677800 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr10:55677800-55683800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr10:55678400-55679000 Enhancers HUES48 Cell Line embryonic stem cell
25 chr10:55678600-55679000 Enhancers iPS-20b Cell Line embryonic stem cell
26 chr10:55681000-55681400 Enhancers Breast Myoepithelial Primary Cells Breast
27 chr10:55681200-55681400 Enhancers Right Atrium heart
28 chr10:55683400-55683600 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
29 chr10:55683800-55684200 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr10:55683800-55684400 ZNF genes & repeats H1 Cell Line embryonic stem cell
31 chr10:55683800-55684600 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
32 chr10:55683800-55685400 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
33 chr10:55684600-55686200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
34 chr10:55685600-55685800 Weak transcription HUES48 Cell Line embryonic stem cell
35 chr10:55685600-55685800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
36 chr10:55686000-55686200 Enhancers HUES48 Cell Line embryonic stem cell
37 chr10:55689800-55692200 Weak transcription Brain Substantia Nigra brain
38 chr10:55697400-55699600 Enhancers HepG2 liver
39 chr10:55706600-55710400 Weak transcription HepG2 liver
40 chr10:55710400-55712400 Enhancers HepG2 liver
41 chr10:55711400-55711600 Enhancers Brain Substantia Nigra brain
42 chr10:55711400-55712000 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
43 chr10:55711400-55712400 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
44 chr10:55711400-55712400 Weak transcription Gastric stomach
45 chr10:55711600-55711800 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
46 chr10:55711600-55712000 ZNF genes & repeats ES-I3 Cell Line embryonic stem cell
47 chr10:55711600-55712600 ZNF genes & repeats Brain Hippocampus Middle brain
48 chr10:55712000-55712200 Strong transcription ES-I3 Cell Line embryonic stem cell
49 chr10:55712000-55712800 ZNF genes & repeats Brain Substantia Nigra brain
50 chr10:55712200-55714400 Weak transcription ES-I3 Cell Line embryonic stem cell

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