Variant report

Variant	nsv482689
Chromosome Location	chr15:77576396-77731559
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1749)
CpG islands
(count:1528)
Chromatin interactive
region (count:113)
LncRNA
region (count:23)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1749 , 50 per page) page: 1 2 3 4 5 6 7 ... 35

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr15:77695057-77695374	K562	blood:	n/a	n/a
2	ARID3A	chr15:77707158-77707446	K562	blood:	n/a	n/a
3	ARID3A	chr15:77712764-77713860	K562	blood:	n/a	n/a
4	ARID3A	chr15:77619354-77619361	K562	blood:	n/a	n/a
5	ARID3A	chr15:77585572-77585679	K562	blood:	n/a	n/a
6	ARID3A	chr15:77711846-77712005	HepG2	liver:	n/a	n/a
7	ARID3A	chr15:77710819-77710914	HepG2	liver:	n/a	n/a
8	ARID3A	chr15:77598099-77599185	K562	blood:	n/a	n/a
9	ARID3A	chr15:77712242-77713741	HepG2	liver:	n/a	n/a
10	ARID3A	chr15:77586248-77586518	HepG2	liver:	n/a	n/a
11	ARID3A	chr15:77717477-77718021	HepG2	liver:	n/a	n/a
12	ATF1	chr15:77707157-77707481	K562	blood:	n/a	n/a
13	ATF1	chr15:77651320-77651499	K562	blood:	n/a	n/a
14	ATF1	chr15:77712829-77713784	K562	blood:	n/a	n/a
15	ATF2	chr15:77702092-77702544	GM12878	blood:	n/a	n/a
16	ATF2	chr15:77712653-77713366	GM12878	blood:	n/a	n/a
17	ATF2	chr15:77712799-77713376	H1-hESC	embryonic stem cell:	n/a	n/a
18	ATF2	chr15:77712787-77713306	GM12878	blood:	n/a	n/a
19	ATF2	chr15:77712879-77713568	H1-hESC	embryonic stem cell:	n/a	n/a
20	ATF2	chr15:77664077-77664623	GM12878	blood:	n/a	n/a
21	ATF2	chr15:77664133-77664622	GM12878	blood:	n/a	n/a
22	ATF3	chr15:77712778-77713338	A549	lung:	n/a	n/a
23	ATF3	chr15:77712848-77713275	K562	blood:	n/a	n/a
24	ATF3	chr15:77712825-77713826	A549	lung:	n/a	n/a
25	BACH1	chr15:77684077-77684081	H1-hESC	embryonic stem cell:	n/a	n/a
26	BACH1	chr15:77711849-77713447	H1-hESC	embryonic stem cell:	n/a	n/a
27	BACH1	chr15:77711508-77711634	H1-hESC	embryonic stem cell:	n/a	n/a
28	BACH1	chr15:77722561-77722594	K562	blood:	n/a	n/a
29	BACH1	chr15:77598380-77598705	K562	blood:	n/a	n/a
30	BATF	chr15:77695020-77695390	GM12878	blood:	n/a	chr15:77695219-77695230
31	BATF	chr15:77722575-77722844	GM12878	blood:	n/a	n/a
32	BATF	chr15:77664022-77664613	GM12878	blood:	n/a	n/a
33	BATF	chr15:77695093-77695368	GM12878	blood:	n/a	chr15:77695219-77695230
34	BATF	chr15:77664176-77664628	GM12878	blood:	n/a	n/a
35	BCL11A	chr15:77698463-77698838	GM12878	blood:	n/a	n/a
36	BCL11A	chr15:77695084-77695404	GM12878	blood:	n/a	chr15:77695223-77695232
37	BCL11A	chr15:77703558-77703969	GM12878	blood:	n/a	n/a
38	BCL11A	chr15:77702180-77702403	GM12878	blood:	n/a	n/a
39	BCL11A	chr15:77664186-77664576	GM12878	blood:	n/a	n/a
40	BCL3	chr15:77712752-77713493	A549	lung:	n/a	chr15:77712932-77712941 chr15:77713476-77713485
41	BCL3	chr15:77712700-77713933	A549	lung:	n/a	chr15:77713529-77713538 chr15:77712932-77712941 chr15:77713476-77713485
42	BCLAF1	chr15:77713358-77713816	GM12878	blood:	n/a	chr15:77713529-77713538 chr15:77713476-77713485
43	BCLAF1	chr15:77719141-77719562	GM12878	blood:	n/a	n/a
44	BCLAF1	chr15:77712133-77712658	GM12878	blood:	n/a	chr15:77712416-77712429 chr15:77712364-77712373 chr15:77712418-77712427 chr15:77712415-77712428 chr15:77712419-77712432
45	BCLAF1	chr15:77712769-77713682	GM12878	blood:	n/a	chr15:77713529-77713538 chr15:77712932-77712941 chr15:77713476-77713485
46	BHLHE40	chr15:77712200-77713581	GM12878	blood:	n/a	chr15:77712415-77712431 chr15:77712356-77712372
47	BHLHE40	chr15:77598630-77598824	K562	blood:	n/a	n/a
48	BHLHE40	chr15:77717442-77717830	HepG2	liver:	n/a	n/a
49	BHLHE40	chr15:77625611-77625697	GM12878	blood:	n/a	n/a
50	BHLHE40	chr15:77711542-77711961	K562	blood:	n/a	n/a

(count:1528 , 50 per page) page: 1 2 3 4 5 6 7 ... 31

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:77713084-77713134	GM12892	blood:	n/a
2	chr15:77643229-77643279	MCF10A-Er-Src	breast:	n/a
3	chr15:77577621-77577671	LNCaP	prostate:	n/a
4	chr15:77713084-77713134	GM12892	blood:	n/a
5	chr15:77643229-77643279	MCF10A-Er-Src	breast:	n/a
6	chr15:77577621-77577671	LNCaP	prostate:	n/a
7	chr15:77711092-77711142	HRCEpiC	kidney:	n/a
8	chr15:77712233-77712283	MCF10A-Er-Src	breast:	n/a
9	chr15:77599761-77599811	GM12878	blood:	n/a
10	chr15:77712738-77712788	GM12891	blood:	n/a
11	chr15:77577655-77577705	SKMC	muscle:	n/a
12	chr15:77577621-77577671	HAEpiC	amniotic membrane:	n/a
13	chr15:77711899-77711949	AoSMC	blood vessel:	n/a
14	chr15:77599761-77599811	T-47D	breast:	n/a
15	chr15:77711686-77711736	Jurkat	blood:	n/a
16	chr15:77645762-77645812	BE2_C	brain:	n/a
17	chr15:77711686-77711736	HRE	kidney:	n/a
18	chr15:77577655-77577705	K562	blood:	n/a
19	chr15:77712428-77712478	HEK293	kidney:	embryo
20	chr15:77711506-77711556	NHBE	bronchial:	n/a
21	chr15:77710372-77710422	Jurkat	blood:	n/a
22	chr15:77713262-77713312	SK-N-MC	brain:	n/a
23	chr15:77695188-77695238	HUVEC	blood vessel:	n/a
24	chr15:77713622-77713672	Hela-S3	cervix:	n/a
25	chr15:77599761-77599811	HEK293	kidney:	embryo
26	chr15:77695188-77695238	SAEC	small airway:	n/a
27	chr15:77710372-77710422	HPAEpiC	pulmonary alveolar:	n/a
28	chr15:77645762-77645812	A549	lung:	n/a
29	chr15:77711506-77711556	GM12892	blood:	n/a
30	chr15:77601643-77601693	H1-hESC	embryonic stem cell:	embryo
31	chr15:77695188-77695238	GM12878	blood:	n/a
32	chr15:77577533-77577583	GM12878	blood:	n/a
33	chr15:77577655-77577705	NH-A	brain:	n/a
34	chr15:77599761-77599811	PANC-1	pancreas:	n/a
35	chr15:77712488-77712538	SAEC	small airway:	n/a
36	chr15:77712233-77712283	K562	blood:	n/a
37	chr15:77627965-77628015	GM12891	blood:	n/a
38	chr15:77712738-77712788	MCF-7	breast:	n/a
39	chr15:77577533-77577583	NH-A	brain:	n/a
40	chr15:77711092-77711142	HRPEpiC	eye:	n/a
41	chr15:77577533-77577583	HL-60	blood:	n/a
42	chr15:77716464-77716514	MCF10A-Er-Src	breast:	n/a
43	chr15:77713622-77713672	NT2-D1	testis:	n/a
44	chr15:77712738-77712788	HPAEpiC	pulmonary alveolar:	n/a
45	chr15:77711686-77711736	BE2_C	brain:	n/a
46	chr15:77713084-77713134	HRE	kidney:	n/a
47	chr15:77577491-77577541	ovcar-3	ovarian:	n/a
48	chr15:77712490-77712540	NHDF-neo	bronchial:	n/a
49	chr15:77577491-77577541	ProgFib	skin:	n/a
50	chr15:77645762-77645812	AoSMC	blood vessel:	n/a

(count:113 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr14:76618214..76618918-chr15:77712733..77713513,2	Hela-S3	cervix:
2	chr15:77696839..77699512-chr15:77702779..77704486,2	K562	blood:
3	chr15:77576555..77578246-chr15:77578519..77580387,2	K562	blood:
4	chr15:77712169..77712890-chr9:130213150..130214053,2	Hela-S3	cervix:
5	chr15:77546340..77548071-chr15:77585201..77587700,2	K562	blood:
6	chr15:77706317..77707830-chr15:77713195..77715239,2	MCF-7	breast:
7	chr15:77700944..77703270-chr15:77704095..77705695,2	K562	blood:
8	chr15:77585431..77587225-chr15:77589534..77592219,2	K562	blood:
9	chr15:77712321..77714990-chr15:77817270..77818791,2	MCF-7	breast:
10	chr15:77724579..77726765-chr15:77728742..77730317,2	K562	blood:
11	chr15:77702853..77706237-chr15:77706527..77708848,4	K562	blood:
12	chr15:77712487..77714237-chr15:77724982..77727349,2	K562	blood:
13	chr15:77729375..77731568-chr15:77731785..77734606,3	K562	blood:
14	chr15:77711837..77714801-chr15:77720000..77724224,8	K562	blood:
15	chr15:77585431..77587225-chr15:77589534..77592219,2	K562	blood:
16	chr15:77665097..77667571-chr15:77669076..77671789,2	MCF-7	breast:
17	chr15:77642108..77645078-chr15:77646061..77648111,2	K562	blood:
18	chr15:77686365..77688021-chr15:77708534..77710284,2	K562	blood:
19	chr15:77694098..77696472-chr15:77713805..77715718,2	K562	blood:
20	chr15:77573695..77576435-chr15:77580239..77581887,3	K562	blood:
21	chr15:77694198..77696717-chr15:77702430..77705235,2	K562	blood:
22	chr15:77543946..77545839-chr15:77577547..77579797,2	MCF-7	breast:
23	chr15:77715788..77717648-chr15:77719796..77722237,2	K562	blood:
24	chr15:77665097..77667571-chr15:77669076..77671789,2	MCF-7	breast:
25	chr15:77597221..77600603-chr15:77601241..77604606,4	K562	blood:
26	chr15:77642843..77646097-chr15:77710944..77713266,3	MCF-7	breast:
27	chr15:77724573..77726906-chr15:77727651..77730310,3	MCF-7	breast:
28	chr15:77673612..77675900-chr15:77720669..77722192,2	K562	blood:
29	chr15:77720681..77722687-chr15:77725659..77728094,2	K562	blood:
30	chr15:77712194..77712871-chr16:2826650..2827468,2	Hela-S3	cervix:
31	chr15:77631784..77633576-chr15:77635603..77638413,2	MCF-7	breast:
32	chr15:77709022..77711510-chr15:77717279..77719349,2	K562	blood:
33	chr15:77631784..77633576-chr15:77635603..77638413,2	MCF-7	breast:
34	chr15:77722169..77724727-chr15:77729292..77731965,2	MCF-7	breast:
35	chr15:77583990..77586060-chr15:77594625..77596162,2	K562	blood:
36	chr15:77573695..77576435-chr15:77580239..77581887,3	K562	blood:
37	chr15:77673612..77675900-chr15:77720669..77722192,2	K562	blood:
38	chr15:77726192..77730190-chr15:77730606..77733927,4	MCF-7	breast:
39	chr15:77688577..77690434-chr15:77709040..77711857,2	K562	blood:
40	chr15:77567760..77570371-chr15:77619185..77622166,2	MCF-7	breast:
41	chr15:77587941..77589755-chr15:77592690..77595045,2	K562	blood:
42	chr15:77712363..77714508-chr15:77726546..77728161,2	MCF-7	breast:
43	chr15:77722169..77724727-chr15:77729292..77731965,2	MCF-7	breast:
44	chr15:77580009..77582319-chr15:77583158..77585492,2	K562	blood:
45	chr15:77662346..77663859-chr15:77693628..77695822,2	K562	blood:
46	chr15:77645675..77647722-chr15:77709885..77712663,2	MCF-7	breast:
47	chr15:77712812..77714533-chr15:77728134..77729751,2	K562	blood:
48	chr15:77639539..77641421-chr15:77670535..77672553,2	MCF-7	breast:
49	chr15:77664650..77667027-chr15:77668705..77670946,2	K562	blood:
50	chr15:77710797..77713299-chr15:77731423..77733931,3	MCF-7	breast:

(count:23 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-PEAK1.1-1	chr15:77577300-77577420	NONHSAT047427
2	lnc-PEAK1.1-1	chr15:77577300-77577420	NONHSAT047430
3	lnc-PEAK1.1-1	chr15:77577300-77577442	NONHSAT047435
4	lnc-PEAK1.1-1	chr15:77712348-77712436	NONHSAT047432
5	lnc-PEAK1.1-2	chr15:77713044-77713209	ENSG00000244881
6	lnc-PEAK1.1-1	chr15:77657505-77657567	NONHSAT047432
7	lnc-PEAK1.1-1	chr15:77577300-77577397	NONHSAT047431
8	lnc-PEAK1.1-1	chr15:77712348-77712518	XLOC_011535
9	lnc-PEAK1.1-1	chr15:77578765-77578846	NONHSAT047427
10	lnc-PEAK1.1-1	chr15:77578765-77578846	NONHSAT047432
11	lnc-PEAK1.1-1	chr15:77712348-77712446	NONHSAT047430
12	lnc-PEAK1.1-1	chr15:77712348-77712530	XLOC_011535
13	lnc-PEAK1.1-1	chr15:77712348-77712556	XLOC_011535
14	lnc-PEAK1.1-1	chr15:77638884-77638973	NONHSAT047431
15	lnc-PEAK1.1-1	chr15:77712348-77712442	NONHSAT047427
16	lnc-PEAK1.1-1	chr15:77578760-77578846	XLOC_011535
17	lnc-PEAK1.1-1	chr15:77649433-77649441	XLOC_011535
18	lnc-PEAK1.1-1	chr15:77657505-77657567	XLOC_011535
19	lnc-PEAK1.1-1	chr15:77578764-77578846	XLOC_011535
20	lnc-PEAK1.1-1	chr15:77657505-77657567	XLOC_011535
21	lnc-PEAK1.1-1	chr15:77577300-77577420	NONHSAT047432
22	lnc-PEAK1.1-1	chr15:77578765-77578846	NONHSAT047431
23	lnc-PEAK1.1-1	chr15:77578765-77578846	NONHSAT047430

No data

Variant related genes	Relation type
HMG20A	TF binding region
PEAK1	TF binding region
HMG20A	CpG island
PEAK1	CpG island
ENSG00000140386	chromatin interactions
ENSG00000173517	chromatin interactions
ENSG00000259362	chromatin interactions
ENSG00000197958	chromatin interactions
ENSG00000182197	chromatin interactions
ENSG00000148356	chromatin interactions
ENSG00000103363	chromatin interactions
ENSG00000140382	chromatin interactions
ENSG00000140391	chromatin interactions
ENSG00000089916	chromatin interactions
B4GALT1	miRNA target sites
NCOA3	miRNA target sites

Extended variants
information (count: 5146 )
Associated
traits (count: 55 )

Variant overlapped rSNPs/rCNVs (count:5146 , 50 per page) page: 1 2 3 4 5 6 7 ... 103

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs540099816	chr15:77576413-77576414	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
2	rs561952265	chr15:77576420-77576421	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
3	rs574016310	chr15:77576482-77576483	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
4	rs544202806	chr15:77576487-77576488	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
5	rs142084823	chr15:77576504-77576505	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
6	rs532856243	chr15:77576544-77576545	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
7	rs181495619	chr15:77576564-77576565	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
8	rs4886857	chr15:77576567-77576568	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
9	rs12910466	chr15:77576602-77576603	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs186226925	chr15:77576623-77576624	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs150712579	chr15:77576639-77576640	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs532699754	chr15:77576669-77576670	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs550526441	chr15:77576694-77576695	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs139110451	chr15:77576697-77576698	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs532545681	chr15:77576715-77576716	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs552555082	chr15:77576720-77576721	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs539501051	chr15:77576727-77576728	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs144022673	chr15:77576764-77576765	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs191076382	chr15:77576774-77576775	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs533970170	chr15:77576788-77576789	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs146491723	chr15:77576912-77576913	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs139893561	chr15:77576942-77576943	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs371369545	chr15:77576993-77576994	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs17383900	chr15:77576994-77576995	Weak transcription Strong transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
25	rs16968744	chr15:77577034-77577035	Weak transcription Strong transcription Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
26	rs75417329	chr15:77577042-77577043	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs560184439	chr15:77577167-77577168	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs527428853	chr15:77577180-77577181	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs148902269	chr15:77577215-77577216	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs561960097	chr15:77577230-77577231	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs534351001	chr15:77577234-77577235	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs555558357	chr15:77577240-77577241	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs574612320	chr15:77577250-77577251	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs575358781	chr15:77577269-77577270	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs549289902	chr15:77577271-77577272	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs36079941	chr15:77577275-77577276	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs529503326	chr15:77577295-77577296	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs550863708	chr15:77577343-77577344	Weak transcription Strong transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
39	rs569496473	chr15:77577381-77577382	Weak transcription Strong transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
40	rs143252848	chr15:77577386-77577387	Weak transcription Strong transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
41	rs551517112	chr15:77577399-77577400	Weak transcription Strong transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
42	rs541686060	chr15:77577403-77577404	Weak transcription Strong transcription Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
43	rs566932845	chr15:77577404-77577405	Weak transcription Strong transcription Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
44	rs370362152	chr15:77577423-77577424	Weak transcription Strong transcription Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
45	rs61149018	chr15:77577424-77577425	Weak transcription Strong transcription Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
46	rs398028030	chr15:77577439-77577440	Weak transcription Strong transcription Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
47	rs534306892	chr15:77577513-77577514	Weak transcription Strong transcription Genic enhancers	CpG island	1 gene(s)	Overlapped CNVs	n/a
48	rs555569353	chr15:77577565-77577566	Weak transcription Strong transcription Genic enhancers	CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
49	rs555825016	chr15:77577585-77577586	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs568138114	chr15:77577656-77577657	Weak transcription Strong transcription Enhancers	CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:55)

Disease	PMID	Source
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Wilms tumour	21544195	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Melanoma	18172304	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
Intellectual disability	22102821	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Prostate cancer	18632612	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Cancer	16751803	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Breast cancer	17133270	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	17322880	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Lung cancer	18438408	CNVD
Myelofibrosis	22110671	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Papillary thyroid carcinoma	22161024	CNVD
Autism	21480499	CNVD
Breast cancer	17603634	CNVD
Acute myeloid leukemia	16864856	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
small cell lung cancer	20016488	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Glioma	20126413	CNVD

Chromatin state (count:2689 , 50 per page) page: 1 2 3 4 5 6 7 ... 54

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:77520200-77578800	Weak transcription	Small Intestine	intestine
2	chr15:77528800-77577200	Weak transcription	Spleen	Spleen
3	chr15:77528800-77579200	Weak transcription	Brain Angular Gyrus	brain
4	chr15:77541800-77589800	Weak transcription	Fetal Intestine Small	intestine
5	chr15:77542200-77580000	Weak transcription	Sigmoid Colon	Sigmoid Colon
6	chr15:77544400-77581000	Weak transcription	Brain Inferior Temporal Lobe	brain
7	chr15:77544600-77589200	Weak transcription	Skeletal Muscle Female	skeletal muscle
8	chr15:77559400-77578800	Weak transcription	Ovary	ovary
9	chr15:77559600-77578800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
10	chr15:77559800-77579400	Weak transcription	Brain Anterior Caudate	brain
11	chr15:77559800-77585200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
12	chr15:77560000-77576600	Weak transcription	Fetal Muscle Trunk	muscle
13	chr15:77562000-77580200	Weak transcription	Cortex derived primary cultured neurospheres	brain
14	chr15:77562200-77589600	Weak transcription	Primary T cells from cord blood	blood
15	chr15:77563400-77577400	Weak transcription	Fetal Kidney	kidney
16	chr15:77565200-77576400	Weak transcription	Rectal Mucosa Donor 31	rectum
17	chr15:77565400-77578800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
18	chr15:77566000-77576400	Weak transcription	Fetal Intestine Large	intestine
19	chr15:77567600-77580200	Weak transcription	Fetal Lung	lung
20	chr15:77568400-77578600	Weak transcription	Esophagus	oesophagus
21	chr15:77568800-77578000	Weak transcription	Thymus	Thymus
22	chr15:77570000-77579400	Weak transcription	Duodenum Smooth Muscle	Duodenum
23	chr15:77570400-77576400	Weak transcription	Primary hematopoietic stem cells	blood
24	chr15:77571600-77576400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
25	chr15:77571800-77578800	Weak transcription	Duodenum Mucosa	Duodenum
26	chr15:77571800-77579400	Weak transcription	Rectal Mucosa Donor 29	rectum
27	chr15:77571800-77579600	Weak transcription	Stomach Smooth Muscle	stomach
28	chr15:77571800-77585600	Weak transcription	Right Ventricle	heart
29	chr15:77572000-77578600	Weak transcription	Placenta	Placenta
30	chr15:77572000-77582000	Weak transcription	Left Ventricle	heart
31	chr15:77572200-77580000	Weak transcription	HSMMtube	muscle
32	chr15:77572600-77580800	Weak transcription	Fetal Muscle Leg	muscle
33	chr15:77573000-77577800	Weak transcription	K562	blood
34	chr15:77573600-77576400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
35	chr15:77573600-77578600	Weak transcription	Primary B cells from cord blood	blood
36	chr15:77573600-77580600	Weak transcription	Primary B cells from peripheral blood	blood
37	chr15:77573600-77589400	Weak transcription	Fetal Stomach	stomach
38	chr15:77573800-77576400	Weak transcription	Primary neutrophils fromperipheralblood	blood
39	chr15:77574000-77576800	Enhancers	HUES64 Cell Line	embryonic stem cell
40	chr15:77574200-77576400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
41	chr15:77574200-77576400	Enhancers	NHDF-Ad	bronchial
42	chr15:77574200-77577000	Enhancers	iPS-18 Cell Line	embryonic stem cell
43	chr15:77574400-77576600	Enhancers	HUES6 Cell Line	embryonic stem cell
44	chr15:77574400-77577000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
45	chr15:77574600-77580800	Weak transcription	Fetal Brain Male	brain
46	chr15:77574600-77585200	Weak transcription	Psoas Muscle	Psoas
47	chr15:77575000-77585400	Weak transcription	NH-A	brain
48	chr15:77575200-77576800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
49	chr15:77575200-77577200	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
50	chr15:77575200-77577800	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood

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