Variant report

Variant	nsv518569
Chromosome Location	chr8:121762686-121770556
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF2	chr8:121769602-121769939	GM12878	blood:	n/a	n/a
2	ATF2	chr8:121769503-121769945	GM12878	blood:	n/a	n/a
3	BATF	chr8:121769422-121770001	GM12878	blood:	n/a	n/a
4	BATF	chr8:121769573-121769922	GM12878	blood:	n/a	n/a
5	BCL11A	chr8:121769593-121769981	GM12878	blood:	n/a	n/a
6	BHLHE40	chr8:121769627-121770156	GM12878	blood:	n/a	n/a
7	CEBPB	chr8:121765376-121765749	IMR90	lung:	n/a	chr8:121765553-121765562 chr8:121765553-121765562 chr8:121765551-121765562 chr8:121765553-121765562 chr8:121765551-121765564
8	CEBPB	chr8:121765307-121765833	MCF-7	breast:	n/a	chr8:121765553-121765562 chr8:121765553-121765562 chr8:121765551-121765562 chr8:121765553-121765562 chr8:121765551-121765564
9	CEBPB	chr8:121770285-121770286	A549	lung:	n/a	n/a
10	CEBPB	chr8:121765318-121765836	MCF-7	breast:	n/a	chr8:121765553-121765562 chr8:121765553-121765562 chr8:121765551-121765562 chr8:121765553-121765562 chr8:121765551-121765564
11	CEBPB	chr8:121765437-121765743	H1-hESC	embryonic stem cell:	n/a	chr8:121765553-121765562 chr8:121765553-121765562 chr8:121765551-121765562 chr8:121765553-121765562 chr8:121765551-121765564
12	CEBPB	chr8:121770197-121771016	HepG2	liver:	n/a	chr8:121770837-121770848 chr8:121770835-121770846
13	CEBPB	chr8:121765373-121765740	HepG2	liver:	n/a	chr8:121765553-121765562 chr8:121765553-121765562 chr8:121765551-121765562 chr8:121765553-121765562 chr8:121765551-121765564
14	CEBPB	chr8:121765393-121765647	K562	blood:	n/a	chr8:121765553-121765562 chr8:121765553-121765562 chr8:121765551-121765562 chr8:121765553-121765562 chr8:121765551-121765564
15	CEBPB	chr8:121765371-121765743	A549	lung:	n/a	chr8:121765553-121765562 chr8:121765553-121765562 chr8:121765551-121765562 chr8:121765553-121765562 chr8:121765551-121765564
16	CEBPB	chr8:121765383-121765731	Hela-S3	cervix:	n/a	chr8:121765553-121765562 chr8:121765553-121765562 chr8:121765551-121765562 chr8:121765553-121765562 chr8:121765551-121765564
17	CTCF	chr8:121765407-121765433	Spleen_OC	spleen:	n/a	n/a
18	EP300	chr8:121769648-121769970	GM12878	blood:	n/a	chr8:121769705-121769713
19	EP300	chr8:121769505-121770116	GM12878	blood:	n/a	chr8:121769705-121769713 chr8:121769614-121769628
20	FOS	chr8:121769382-121769515	MCF10A-Er-Src	breast:	n/a	n/a
21	FOXA1	chr8:121769260-121769517	T-47D	breast:	n/a	n/a
22	GATA3	chr8:121769293-121769735	T-47D	breast:	n/a	chr8:121769616-121769626
23	GATA3	chr8:121762558-121762978	MCF-7	breast:	n/a	chr8:121762706-121762715 chr8:121762702-121762718 chr8:121762702-121762718 chr8:121762699-121762720
24	GATA3	chr8:121765707-121766191	MCF-7	breast:	n/a	chr8:121766061-121766068 chr8:121766061-121766068 chr8:121766061-121766068 chr8:121765908-121765916
25	GATA3	chr8:121769276-121769682	T-47D	breast:	n/a	chr8:121769616-121769626
26	IKZF1	chr8:121769480-121770092	GM12878	blood:	n/a	n/a
27	IRF4	chr8:121769565-121769973	GM12878	blood:	n/a	n/a
28	JUND	chr8:121766728-121767010	HepG2	liver:	n/a	n/a
29	MAFF	chr8:121764348-121764553	HepG2	liver:	n/a	n/a
30	MAFK	chr8:121764319-121764602	HepG2	liver:	n/a	chr8:121764473-121764490 chr8:121764471-121764482
31	MAFK	chr8:121769359-121769596	H1-hESC	embryonic stem cell:	n/a	n/a
32	MAFK	chr8:121764425-121764520	IMR90	lung:	n/a	chr8:121764473-121764490 chr8:121764471-121764482
33	MAFK	chr8:121764310-121764619	HepG2	liver:	n/a	chr8:121764473-121764490 chr8:121764471-121764482
34	MAX	chr8:121769393-121769635	H1-hESC	embryonic stem cell:	n/a	n/a
35	MAX	chr8:121765403-121765516	NB4	blood:	n/a	n/a
36	MAX	chr8:121765822-121765841	NB4	blood:	n/a	n/a
37	MAZ	chr8:121769726-121770064	GM12878	blood:	n/a	n/a
38	MYC	chr8:121769490-121769721	H1-hESC	embryonic stem cell:	n/a	n/a
39	MYC	chr8:121765440-121765697	NB4	blood:	n/a	n/a
40	NANOG	chr8:121769401-121769672	H1-hESC	embryonic stem cell:	n/a	n/a
41	NFIC	chr8:121769653-121769994	GM12878	blood:	n/a	n/a
42	POLR2A	chr8:121770165-121770321	MCF10A-Er-Src	breast:	n/a	n/a
43	POLR2A	chr8:121766474-121766636	HepG2	liver:	n/a	n/a
44	POLR2A	chr8:121769346-121769977	HepG2	liver:	n/a	n/a
45	POLR2A	chr8:121769426-121769570	HepG2	liver:	n/a	n/a
46	POLR2A	chr8:121763243-121764423	HepG2	liver:	n/a	n/a
47	POLR2A	chr8:121769233-121769726	HepG2	liver:	n/a	n/a
48	POLR2A	chr8:121769242-121769621	HepG2	liver:	n/a	n/a
49	POLR2A	chr8:121764899-121766363	HepG2	liver:	n/a	n/a
50	POLR2A	chr8:121765453-121765935	HepG2	liver:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr8:121768955-121769005	SK-N-MC	brain:	n/a
2	chr8:121768955-121769005	SKMC	muscle:	n/a
3	chr8:121768955-121769005	HCPEpiC	choroid plexus:	n/a
4	chr8:121768955-121769005	GM12878	blood:	n/a
5	chr8:121768955-121769005	HL-60	blood:	n/a
6	chr8:121768955-121769005	Hela-S3	cervix:	n/a
7	chr8:121768955-121769005	K562	blood:	n/a
8	chr8:121768955-121769005	Hepatocyte	liver:	n/a
9	chr8:121768955-121769005	HCT-116	colon:	n/a
10	chr8:121768955-121769005	ProgFib	skin:	n/a
11	chr8:121768955-121769005	GM06990	blood:	n/a
12	chr8:121768955-121769005	U87	brain:	n/a
13	chr8:121768955-121769005	NHBE	bronchial:	n/a
14	chr8:121768955-121769005	PrEC	prostate:	n/a
15	chr8:121768955-121769005	HRE	kidney:	n/a
16	chr8:121768955-121769005	NHDF-neo	bronchial:	n/a
17	chr8:121768955-121769005	MCF10A-Er-Src	breast:	n/a
18	chr8:121768955-121769005	AG10803	skin:	n/a
19	chr8:121768955-121769005	HIPEpiC	eye:	n/a
20	chr8:121768955-121769005	A549	lung:	n/a
21	chr8:121768955-121769005	AoSMC	blood vessel:	n/a
22	chr8:121768955-121769005	MCF-7	breast:	n/a
23	chr8:121768955-121769005	GM12891	blood:	n/a
24	chr8:121768955-121769005	Caco-2	colon:	n/a
25	chr8:121768955-121769005	SK-N-SH	brain:	n/a
26	chr8:121768955-121769005	HMEC	breast:	n/a
27	chr8:121768955-121769005	SK-N-SH_RA	brain:	n/a
28	chr8:121768955-121769005	H1-hESC	embryonic stem cell:	embryo
29	chr8:121768955-121769005	AG09309	skin:	n/a
30	chr8:121768955-121769005	BE2_C	brain:	n/a
31	chr8:121768955-121769005	HAEpiC	amniotic membrane:	n/a
32	chr8:121768955-121769005	HNPCEpiC	eye:	n/a
33	chr8:121768955-121769005	PFSK-1	brain:	n/a
34	chr8:121768955-121769005	AG09319	gingival:	n/a
35	chr8:121768955-121769005	HUVEC	blood vessel:	n/a
36	chr8:121768955-121769005	Jurkat	blood:	n/a
37	chr8:121768955-121769005	NT2-D1	testis:	n/a
38	chr8:121768955-121769005	LNCaP	prostate:	n/a
39	chr8:121768955-121769005	ovcar-3	ovarian:	n/a
40	chr8:121768955-121769005	BJ	skin:	n/a
41	chr8:121768955-121769005	IMR90	lung:	fetal
42	chr8:121768955-121769005	AG04449	skin:	fetal
43	chr8:121768955-121769005	NH-A	brain:	n/a
44	chr8:121768955-121769005	HRCEpiC	kidney:	n/a
45	chr8:121768955-121769005	AG04450	lung:	fetal
46	chr8:121768955-121769005	HRPEpiC	eye:	n/a
47	chr8:121768955-121769005	HPAEpiC	pulmonary alveolar:	n/a
48	chr8:121768955-121769005	T-47D	breast:	n/a
49	chr8:121768955-121769005	PANC-1	pancreas:	n/a
50	chr8:121768955-121769005	GM12892	blood:	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:101317910..101318802-chr8:121766187..121766798,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000248318	TF binding region
ENSG00000248318	CpG island
ENSG00000243396	chromatin interactions

Extended variants
information (count: 307 )
Associated
traits (count: 141 )

Variant overlapped rSNPs/rCNVs (count:307 , 50 per page) page: 1 2 3 4 5 6 7

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs11985259	chr8:121762686-121762687	Weak transcription Enhancers Flanking Active TSS Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs569412916	chr8:121762689-121762690	Weak transcription Enhancers Flanking Active TSS Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs186501239	chr8:121762715-121762716	Weak transcription Enhancers Flanking Active TSS Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs140449426	chr8:121762735-121762736	Weak transcription Enhancers Flanking Active TSS Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs571814076	chr8:121762751-121762752	Weak transcription Enhancers Flanking Active TSS Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs539234191	chr8:121762772-121762773	Weak transcription Enhancers Flanking Active TSS Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs554029558	chr8:121762807-121762808	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs370265966	chr8:121762814-121762815	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs548825674	chr8:121762822-121762823	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs572600318	chr8:121762897-121762898	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs536390955	chr8:121762898-121762899	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs554619563	chr8:121762900-121762901	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs566920320	chr8:121762920-121762921	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs142122645	chr8:121762924-121762925	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs11997006	chr8:121762943-121762944	Weak transcription Enhancers Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs11993293	chr8:121762956-121762957	Weak transcription Enhancers Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
17	rs571232125	chr8:121762959-121762960	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs565191872	chr8:121762970-121762971	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs4871119	chr8:121763046-121763047	Weak transcription Enhancers Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
20	rs190835233	chr8:121763072-121763073	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs199657754	chr8:121763110-121763111	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs58755659	chr8:121763115-121763116	Weak transcription Enhancers Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
23	rs548334188	chr8:121763119-121763120	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs372458785	chr8:121763150-121763151	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs36050626	chr8:121763155-121763156	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs386729319	chr8:121763167-121763168	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs4871121	chr8:121763169-121763170	Weak transcription Enhancers Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
28	rs551230274	chr8:121763180-121763181	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs551846924	chr8:121763194-121763195	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs182324831	chr8:121763195-121763196	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs186946094	chr8:121763198-121763199	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs192707544	chr8:121763219-121763220	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs4871122	chr8:121763223-121763224	Weak transcription Enhancers Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
34	rs115662152	chr8:121763269-121763270	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs572922692	chr8:121763283-121763284	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs554656435	chr8:121763305-121763306	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs540522524	chr8:121763348-121763349	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs576085423	chr8:121763388-121763389	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs558541612	chr8:121763417-121763418	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs149242377	chr8:121763423-121763424	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs4871123	chr8:121763501-121763502	Weak transcription Enhancers Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
42	rs577158779	chr8:121763508-121763509	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs183111547	chr8:121763536-121763537	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs34901528	chr8:121763542-121763543	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs4870749	chr8:121763576-121763577	Weak transcription Enhancers Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
46	rs188196496	chr8:121763673-121763674	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs542013325	chr8:121763691-121763692	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs150773856	chr8:121763715-121763716	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs563382347	chr8:121763722-121763723	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs368000086	chr8:121763730-121763731	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:141)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Ewing''s sarcoma	21437220	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Gastric cancer	17908304	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Liver carcinoma	19366792	CNVD
Seminomas	18059402	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Pancreatic cancer	21811587	CNVD
Thyroid cancer	19087340	CNVD
Myelofibrosis	22110671	CNVD
Testicular cancer	18059402	CNVD
Breast cancer	17133270	CNVD
Breast cancer	21509527	CNVD
Acute myeloid leukemia	20729466	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
abnormal development	18461090	CNVD
Oral cancer	21386901	CNVD
Uveal melanoma	21693616	CNVD
Langer-Giedion syndrome	22283845	CNVD
Cancer	21637783	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	20632083	CNVD
Breast cancer	17603634	CNVD
Breast cancer	19602461	CNVD
Cancer	22429812	CNVD
Endometrial cancer	22040021	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	21080181	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oral cancer	19627613	CNVD
Prostate cancer	21088497	CNVD
colon cancer	17210682	CNVD
Breast cancer	21264507	CNVD
Breast cancer	22028636	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	16751803	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Gastric cancer	17167181	CNVD
Colorectal cancer	19359472	CNVD
Breast cancer	16461572	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
head and neck squamous cell carcinoma	18028549	CNVD
Breast cancer	17001317	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Ewing''s sarcoma	17952124	CNVD
Urothelial carcinoma	21177765	CNVD
Lung cancer	18438408	CNVD
Breast cancer	16608533	CNVD
Metanephric adenoma	20802469	CNVD
Hepatocellular carcinoma	18803288	CNVD
Prostate cancer	18632612	CNVD
Ovarian cancer	22174824	CNVD
Prostate cancer	16573809	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Adenocarcinoma	21044232	CNVD
Squamous cell cancer	20885788	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Prostate cancer	16461572	CNVD
Breast cancer	21399628	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Breast cancer	17393978	CNVD
Burkitt''s lymphoma	18698080	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Breast cancer	17899364	CNVD
Acute myeloid leukemia	21251322	CNVD
lymphocytic leukemia	21291569	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Breast cancer	21611746	CNVD
Developmental delay	21147756	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Congenital diaphragmatic hernia	21525063	CNVD
Non-small cell lung cancer	19010865	CNVD
small cell lung cancer	20016488	CNVD
Papillary thyroid cancer	17515504	CNVD
Basal cell lymphoma	17053054	CNVD
Breast cancer	20932292	CNVD
Gastric cancer	22539939	CNVD
Breast cancer	22056952	CNVD
Langer-Giedion syndrome	16773131	CNVD
Lung cancer	16740712	CNVD
Mental retardation	16773131	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Langer-Giedion syndrome	22470819	CNVD
Cornelia de Lange syndrome	24599119	CNVD
Gastric cancer	21528007	CNVD
Breast cancer	22532251	CNVD
Cervical cancer	21062161	CNVD
Cancer	21129771	CNVD
benign familial neonatal convulsions	18472482	CNVD
Breast cancer	16417655	CNVD
Astrocytoma	17387387	CNVD
Cancer	21183584	CNVD
Follicular lymphoma	20505157	CNVD
T-cell lymphomas	19863542	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	20607354	CNVD
Breast cancer	20814816	CNVD
Colorectal cancer	22486879	CNVD
Breast cancer	17908964	CNVD
Colorectal cancer	20031965	CNVD
Hepatocellular carcinoma	16750200	CNVD
Ovarian cancer	17908964	CNVD
Ovarian cancer	20031965	CNVD
Prostate cancer	20031965	CNVD
Non-small cell lung cancer	17643093	CNVD
Prostate cancer	19242612	CNVD
Colorectal cancer	16774939	CNVD
Multiple myeloma	17550852	CNVD
Glioblastoma multiforme	18628472	CNVD
Malignant melanoma	17260012	CNVD
Breast cancer	18698023	CNVD
Multiple myeloma	16461302	CNVD
Uveal melanoma	20484589	CNVD
head and neck squamous cell carcinoma	16740747	CNVD
Breast cancer	19181860	CNVD
Endometrial cancer	23636398	CNVD
Intracranial aneurysm	16715129	CNVD
Breast cancer	16397240	CNVD
Multiple myeloma	16616336	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Breast cancer	21364760	CNVD
Oral squamous cell carcinoma	21853135	CNVD
Prostate cancer	22341455	CNVD
Cancer	20164919	CNVD
Colorectal cancer	21645411	CNVD
Pancreatic cancer	17952125	CNVD
T-cell lymphomas	22341440	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:183 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:121745800-121774200	Weak transcription	Fetal Stomach	stomach
2	chr8:121757200-121763800	Enhancers	Primary monocytes fromperipheralblood	blood
3	chr8:121757600-121763000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr8:121757800-121763400	Enhancers	Liver	Liver
5	chr8:121758200-121768600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
6	chr8:121758200-121774400	Weak transcription	Left Ventricle	heart
7	chr8:121758400-121769200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
8	chr8:121758400-121769400	Weak transcription	HSMM	muscle
9	chr8:121758400-121769400	Weak transcription	NHLF	lung
10	chr8:121758400-121770600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr8:121758400-121771800	Weak transcription	Pancreas	Pancrea
12	chr8:121758400-121774400	Weak transcription	Lung	lung
13	chr8:121759400-121763600	Enhancers	Primary B cells from peripheral blood	blood
14	chr8:121759600-121763400	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
15	chr8:121759800-121764400	Enhancers	Skeletal Muscle Female	skeletal muscle
16	chr8:121760200-121764400	Enhancers	HSMMtube	muscle
17	chr8:121760600-121764400	Enhancers	Psoas Muscle	Psoas
18	chr8:121760800-121762800	Flanking Active TSS	Primary T cells from cord blood	blood
19	chr8:121761200-121789400	Weak transcription	Fetal Kidney	kidney
20	chr8:121761600-121764600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
21	chr8:121761800-121764400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
22	chr8:121762000-121774200	Weak transcription	Fetal Muscle Leg	muscle
23	chr8:121762200-121763000	Enhancers	Fetal Thymus	thymus
24	chr8:121762200-121763000	Weak transcription	Skeletal Muscle Male	skeletal muscle
25	chr8:121762200-121763200	Enhancers	Primary T cells fromperipheralblood	blood
26	chr8:121762200-121763200	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
27	chr8:121762200-121763400	Enhancers	Primary hematopoietic stem cells	blood
28	chr8:121762200-121763600	Enhancers	Primary neutrophils fromperipheralblood	blood
29	chr8:121762200-121763600	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
30	chr8:121762200-121764000	Weak transcription	Sigmoid Colon	Sigmoid Colon
31	chr8:121762200-121764400	Enhancers	Primary hematopoietic stem cells short term culture	blood
32	chr8:121762200-121764400	Enhancers	Primary T helper naive cells from peripheral blood	blood
33	chr8:121762200-121764400	Enhancers	Primary T helper cells PMA-I stimulated	--
34	chr8:121762200-121764400	Enhancers	Primary T helper cells fromperipheralblood	blood
35	chr8:121762200-121764400	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
36	chr8:121762200-121766400	Enhancers	Primary T killer memory cells from peripheral blood	blood
37	chr8:121762200-121766600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
38	chr8:121762400-121762800	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
39	chr8:121762400-121763200	Enhancers	Primary T regulatory cells fromperipheralblood	blood
40	chr8:121762400-121763800	Enhancers	Monocytes-CD14+_RO01746	blood
41	chr8:121762400-121764200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
42	chr8:121762400-121764400	Enhancers	Primary B cells from cord blood	blood
43	chr8:121762600-121762800	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
44	chr8:121762600-121762800	Enhancers	Cortex derived primary cultured neurospheres	brain
45	chr8:121762600-121764200	Weak transcription	Small Intestine	intestine
46	chr8:121762600-121764400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
47	chr8:121762600-121764400	Genic enhancers	HepG2	liver
48	chr8:121762800-121764400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
49	chr8:121762800-121764600	Enhancers	Primary T cells from cord blood	blood
50	chr8:121762800-121766600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links