Variant report

Variant	rs186501239
Chromosome Location	chr8:121762715-121762716
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1016172	chr8:121679590-121929916	Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv891422	chr8:121680857-121819478	Strong transcription Weak transcription Enhancers Genic enhancers ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv518562	chr8:121762686-121763046	Weak transcription Enhancers Flanking Active TSS Genic enhancers	n/a	n/a	inside rSNPs	diseases
4	nsv518569	chr8:121762686-121770556	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:47 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:121745800-121774200	Weak transcription	Fetal Stomach	stomach
2	chr8:121757200-121763800	Enhancers	Primary monocytes fromperipheralblood	blood
3	chr8:121757600-121763000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr8:121757800-121763400	Enhancers	Liver	Liver
5	chr8:121758200-121768600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
6	chr8:121758200-121774400	Weak transcription	Left Ventricle	heart
7	chr8:121758400-121769200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
8	chr8:121758400-121769400	Weak transcription	HSMM	muscle
9	chr8:121758400-121769400	Weak transcription	NHLF	lung
10	chr8:121758400-121770600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr8:121758400-121771800	Weak transcription	Pancreas	Pancrea
12	chr8:121758400-121774400	Weak transcription	Lung	lung
13	chr8:121759400-121763600	Enhancers	Primary B cells from peripheral blood	blood
14	chr8:121759600-121763400	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
15	chr8:121759800-121764400	Enhancers	Skeletal Muscle Female	skeletal muscle
16	chr8:121760200-121764400	Enhancers	HSMMtube	muscle
17	chr8:121760600-121764400	Enhancers	Psoas Muscle	Psoas
18	chr8:121760800-121762800	Flanking Active TSS	Primary T cells from cord blood	blood
19	chr8:121761200-121789400	Weak transcription	Fetal Kidney	kidney
20	chr8:121761600-121764600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
21	chr8:121761800-121764400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
22	chr8:121762000-121774200	Weak transcription	Fetal Muscle Leg	muscle
23	chr8:121762200-121763000	Enhancers	Fetal Thymus	thymus
24	chr8:121762200-121763000	Weak transcription	Skeletal Muscle Male	skeletal muscle
25	chr8:121762200-121763200	Enhancers	Primary T cells fromperipheralblood	blood
26	chr8:121762200-121763200	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
27	chr8:121762200-121763400	Enhancers	Primary hematopoietic stem cells	blood
28	chr8:121762200-121763600	Enhancers	Primary neutrophils fromperipheralblood	blood
29	chr8:121762200-121763600	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
30	chr8:121762200-121764000	Weak transcription	Sigmoid Colon	Sigmoid Colon
31	chr8:121762200-121764400	Enhancers	Primary hematopoietic stem cells short term culture	blood
32	chr8:121762200-121764400	Enhancers	Primary T helper naive cells from peripheral blood	blood
33	chr8:121762200-121764400	Enhancers	Primary T helper cells PMA-I stimulated	--
34	chr8:121762200-121764400	Enhancers	Primary T helper cells fromperipheralblood	blood
35	chr8:121762200-121764400	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
36	chr8:121762200-121766400	Enhancers	Primary T killer memory cells from peripheral blood	blood
37	chr8:121762200-121766600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
38	chr8:121762400-121762800	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
39	chr8:121762400-121763200	Enhancers	Primary T regulatory cells fromperipheralblood	blood
40	chr8:121762400-121763800	Enhancers	Monocytes-CD14+_RO01746	blood
41	chr8:121762400-121764200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
42	chr8:121762400-121764400	Enhancers	Primary B cells from cord blood	blood
43	chr8:121762600-121762800	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
44	chr8:121762600-121762800	Enhancers	Cortex derived primary cultured neurospheres	brain
45	chr8:121762600-121764200	Weak transcription	Small Intestine	intestine
46	chr8:121762600-121764400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
47	chr8:121762600-121764400	Genic enhancers	HepG2	liver

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