Variant report

Variant	nsv520495
Chromosome Location	chr8:20942928-20944251
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:20940533..20944455-chr8:21040696..21044387,3	K562	blood:

Extended variants
information (count: 44 )
Associated
traits (count: 116 )

Variant overlapped rSNPs/rCNVs (count:44 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs150460867	chr8:20943202-20943203	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs573564142	chr8:20943206-20943207	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs190833566	chr8:20943257-20943258	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs540952668	chr8:20943306-20943307	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs552871636	chr8:20943388-20943389	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs111256742	chr8:20943392-20943393	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs180982864	chr8:20943398-20943399	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs185970871	chr8:20943406-20943407	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs138501733	chr8:20943441-20943442	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs570565088	chr8:20943508-20943509	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs191240816	chr8:20943511-20943512	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs528473031	chr8:20943513-20943514	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs114096867	chr8:20943557-20943558	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs566908580	chr8:20943581-20943582	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs571987983	chr8:20943585-20943586	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs111384626	chr8:20943594-20943595	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs374943941	chr8:20943658-20943659	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs558517581	chr8:20943668-20943669	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs569422628	chr8:20943669-20943670	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs536778018	chr8:20943726-20943727	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs377349278	chr8:20943746-20943747	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs555416150	chr8:20943758-20943759	Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs370696571	chr8:20943759-20943760	Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs73668149	chr8:20943837-20943838	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
25	rs373851563	chr8:20943861-20943862	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs552511317	chr8:20943905-20943906	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs577517537	chr8:20943913-20943914	Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs34882429	chr8:20943916-20943917	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs556918866	chr8:20943966-20943967	Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs372003553	chr8:20943983-20943984	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs575381380	chr8:20943992-20943993	Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs138017203	chr8:20943999-20944000	Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs376971177	chr8:20944000-20944001	Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs140125208	chr8:20944009-20944010	Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs34104131	chr8:20944016-20944017	Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs71222179	chr8:20944017-20944018	Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs114737038	chr8:20944065-20944066	Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs183101356	chr8:20944072-20944073	Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs537582082	chr8:20944126-20944127	Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs528565394	chr8:20944129-20944130	Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs35190001	chr8:20944164-20944165	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
42	rs565233547	chr8:20944185-20944186	Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs140668778	chr8:20944249-20944250	Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs6985275	chr8:20944251-20944252	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance

Variant related diseases (count:116)

Disease	PMID	Source
Multiple myeloma	16616336	CNVD
Hepatocellular carcinoma	22174799	CNVD
Heart disease	21282601	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Prostate cancer	16573809	CNVD
T-cell lymphomas	19863542	CNVD
Ovarian cancer	22174824	CNVD
Colorectal cancer	21297112	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Salivary gland tumor	18059337	CNVD
Breast cancer	17133270	CNVD
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Breast cancer	17393978	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Breast cancer	20837533	CNVD
Squamous cell cancer	21044232	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	22429812	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Colorectal cancer	20709793	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Basal cell lymphoma	21115979	CNVD
Breast cancer	21264507	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Oral cancer	21386901	CNVD
Prostate cancer	21088497	CNVD
Prostate cancer	21965145	CNVD
Breast cancer	20940404	CNVD
Colorectal cancer	19359472	CNVD
Embryonal rhabdomyosarcoma	16790082	CNVD
Gastric cancer	17167181	CNVD
Prostate cancer	16705090	CNVD
8p-syndrome	17576883	CNVD
Colorectal cancer	16272173	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
Lung adenocarcinoma	19525976	CNVD
Lung cancer	19525976	CNVD
Prostate cancer	17245344	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Cancer	16751803	CNVD
Wilms tumour	21544195	CNVD
Gastric cancer	17908304	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Breast cancer	21785460	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Acute myeloid leukemia	20729466	CNVD
Breast cancer	21509527	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Acute myeloid leukemia	21251322	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
lymphocytic leukemia	21291569	CNVD
Liver carcinoma	19366792	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	16608533	CNVD
Seminomas	18059402	CNVD
Lung cancer	18438408	CNVD
Medulloblastoma	16783165	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Myxofibrosarcoma	16751306	CNVD
Immune disease	21572526	CNVD
Non-small cell lung cancer	21829676	CNVD
Ovarian neoplasms	16753589	CNVD
Kallmann Syndrome 2	22470819	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Epilepsy	22083797	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Myelofibrosis	22110671	CNVD
Prostate cancer	16461572	CNVD
Breast cancer	17603634	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Bladder cancer	21909424	CNVD
Multiple myeloma	17550852	CNVD
Pancreatic cancer	21811587	CNVD
Multiple myeloma	16461302	CNVD
Developmental delay	21373258	CNVD
Thyroid cancer	19087340	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Breast cancer	21364760	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Cancer	18840272	CNVD
Breast cancer	19602461	CNVD
Osteosarcoma	19286668	CNVD
Prostate cancer	19242612	CNVD
Prostate cancer	19258508	CNVD
small cell lung cancer	20016488	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Gastric adenocarcinoma	19115996	CNVD
Colorectal cancer	19455253	CNVD
Melanoma	20688739	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:20943200-20943800	Enhancers	Skeletal Muscle Male	skeletal muscle
2	chr8:20943400-20943800	Enhancers	Skeletal Muscle Female	skeletal muscle
3	chr8:20943400-20945000	Enhancers	Psoas Muscle	Psoas
4	chr8:20943600-20944000	Enhancers	Pancreas	Pancrea

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