Variant report

Variant	rs73668149
Chromosome Location	chr8:20943837-20943838
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs11985568	1.00[AFR][1000 genomes]
rs11991054	1.00[AFR][1000 genomes]
rs57327081	1.00[AFR][1000 genomes]
rs58738915	1.00[AFR][1000 genomes]
rs58992878	1.00[AFR][1000 genomes]
rs73668145	1.00[AFR][1000 genomes]
rs73668147	1.00[AFR][1000 genomes]
rs73668151	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:12 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1032450	chr8:20514995-21033577	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
2	nsv539524	chr8:20514995-21033577	Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
3	nsv1034265	chr8:20742935-21152545	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
4	nsv539528	chr8:20742935-21152545	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
5	nsv831260	chr8:20907266-21097125	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
6	nsv520495	chr8:20942928-20944251	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
7	esv3478989	chr8:20943266-20943912	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
8	esv3363889	chr8:20943299-20943897	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
9	esv3515242	chr8:20943306-20943858	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
10	esv3478988	chr8:20943322-20943877	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
11	esv3478990	chr8:20943331-20943878	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
12	esv3515243	chr8:20943349-20943863	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:20943400-20945000	Enhancers	Psoas Muscle	Psoas
2	chr8:20943600-20944000	Enhancers	Pancreas	Pancrea

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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