Variant report

Variant	nsv520674
Chromosome Location	chr5:112911165-112942820
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:294)
CpG islands
(count:61)
Chromatin interactive
region (count:12)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:3)

(count:294 , 50 per page) page: 1 2 3 4 5 6

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CEBPB	chr5:112937613-112937698	H1-hESC	embryonic stem cell:	n/a	chr5:112937630-112937641
2	CEBPB	chr5:112937565-112937748	A549	lung:	n/a	chr5:112937630-112937641
3	CEBPB	chr5:112916537-112916820	K562	blood:	n/a	n/a
4	CEBPB	chr5:112937530-112937730	HepG2	liver:	n/a	chr5:112937630-112937641
5	CTCF	chr5:112942313-112942491	HepG2	liver:	n/a	n/a
6	CTCF	chr5:112942309-112942510	A549	lung:	n/a	n/a
7	CTCF	chr5:112942264-112942576	MCF-7	breast:	n/a	n/a
8	CTCF	chr5:112942295-112942574	Medullo	brain:	n/a	n/a
9	CTCF	chr5:112942360-112942510	GM12872	blood:	n/a	n/a
10	CTCF	chr5:112942279-112942571	K562	blood:	n/a	n/a
11	CTCF	chr5:112942360-112942510	HRE	kidney:	n/a	n/a
12	CTCF	chr5:112942360-112942510	HVMF	connective:	n/a	n/a
13	CTCF	chr5:112942297-112942551	MCF-7	breast:	n/a	n/a
14	CTCF	chr5:112942360-112942510	NHDF-neo	bronchial:	n/a	n/a
15	CTCF	chr5:112942340-112942490	GM06990	blood:	n/a	n/a
16	CTCF	chr5:112942360-112942510	AG10803	skin:	n/a	n/a
17	CTCF	chr5:112942277-112942548	Fibrobl	skin:	n/a	n/a
18	CTCF	chr5:112924472-112924585	GM13976	blood:	n/a	n/a
19	CTCF	chr5:112942299-112942516	SK-N-SH_RA	brain:	n/a	n/a
20	CTCF	chr5:112942380-112942530	GM12864	blood:	n/a	n/a
21	CTCF	chr5:112942286-112942566	T-47D	breast:	n/a	n/a
22	CTCF	chr5:112942184-112942665	GM12878	blood:	n/a	n/a
23	CTCF	chr5:112942360-112942510	GM12869	blood:	n/a	n/a
24	CTCF	chr5:112942320-112942470	HAc	cerebellar:	n/a	n/a
25	CTCF	chr5:112942206-112942649	A549	lung:	n/a	n/a
26	CTCF	chr5:112942300-112942450	WI-38	lung:	n/a	n/a
27	CTCF	chr5:112942340-112942490	GM12870	blood:	n/a	n/a
28	CTCF	chr5:112941900-112942050	HCPEpiC	choroid plexus:	n/a	n/a
29	CTCF	chr5:112942272-112942567	HUVEC	blood vessel:	n/a	n/a
30	CTCF	chr5:112942420-112942570	K562	blood:	n/a	n/a
31	CTCF	chr5:112942290-112942570	Hela-S3	cervix:	n/a	n/a
32	CTCF	chr5:112942360-112942510	HRPEpiC	eye:	n/a	n/a
33	CTCF	chr5:112942360-112942510	GM12864	blood:	n/a	n/a
34	CTCF	chr5:112942380-112942530	NHEK	skin:	n/a	n/a
35	CTCF	chr5:112929040-112929190	MCF-7	breast:	n/a	n/a
36	CTCF	chr5:112942295-112942560	ProgFib	skin:	n/a	n/a
37	CTCF	chr5:112942340-112942490	GM12872	blood:	n/a	n/a
38	CTCF	chr5:112942340-112942490	HFF-Myc	foreskin:	n/a	n/a
39	CTCF	chr5:112942340-112942490	SK-N-SH_RA	brain:	n/a	n/a
40	CTCF	chr5:112942380-112942530	GM12872	blood:	n/a	n/a
41	CTCF	chr5:112942020-112942170	AG04449	skin:	n/a	n/a
42	CTCF	chr5:112942400-112942550	GM12869	blood:	n/a	n/a
43	CTCF	chr5:112942360-112942510	NHEK	skin:	n/a	n/a
44	CTCF	chr5:112942360-112942510	HCT-116	colon:	n/a	n/a
45	CTCF	chr5:112942350-112942532	GM20000	blood:	n/a	n/a
46	CTCF	chr5:112942296-112942509	MCF-7	breast:	n/a	n/a
47	CTCF	chr5:112942320-112942538	GM13976	blood:	n/a	n/a
48	CTCF	chr5:112942360-112942510	HPAF	blood vessel:	n/a	n/a
49	CTCF	chr5:112942176-112942627	H1-hESC	embryonic stem cell:	n/a	n/a
50	CTCF	chr5:112942380-112942530	AG04450	lung:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr5:112930120-112930170	GM12891	blood:	n/a
2	chr5:112930120-112930170	Hepatocyte	liver:	n/a
3	chr5:112930120-112930170	HCF	heart:	n/a
4	chr5:112930120-112930170	HRPEpiC	eye:	n/a
5	chr5:112930120-112930170	SAEC	small airway:	n/a
6	chr5:112930120-112930170	T-47D	breast:	n/a
7	chr5:112930120-112930170	BE2_C	brain:	n/a
8	chr5:112930120-112930170	AG04450	lung:	fetal
9	chr5:112930120-112930170	U87	brain:	n/a
10	chr5:112930120-112930170	PrEC	prostate:	n/a
11	chr5:112930120-112930170	GM06990	blood:	n/a
12	chr5:112930120-112930170	NHDF-neo	bronchial:	n/a
13	chr5:112930120-112930170	HCT-116	colon:	n/a
14	chr5:112930120-112930170	MCF-7	breast:	n/a
15	chr5:112930120-112930170	AG09309	skin:	n/a
16	chr5:112930120-112930170	ProgFib	skin:	n/a
17	chr5:112930120-112930170	NT2-D1	testis:	n/a
18	chr5:112930120-112930170	HCPEpiC	choroid plexus:	n/a
19	chr5:112930120-112930170	SK-N-MC	brain:	n/a
20	chr5:112930120-112930170	HAEpiC	amniotic membrane:	n/a
21	chr5:112930120-112930170	HPAEpiC	pulmonary alveolar:	n/a
22	chr5:112930120-112930170	H1-hESC	embryonic stem cell:	embryo
23	chr5:112930120-112930170	HRE	kidney:	n/a
24	chr5:112930120-112930170	AG04449	skin:	fetal
25	chr5:112930120-112930170	SKMC	muscle:	n/a
26	chr5:112930120-112930170	GM12892	blood:	n/a
27	chr5:112930120-112930170	NH-A	brain:	n/a
28	chr5:112930120-112930170	CMK	blood:	n/a
29	chr5:112930120-112930170	AG10803	skin:	n/a
30	chr5:112930120-112930170	K562	blood:	n/a
31	chr5:112930120-112930170	BJ	skin:	n/a
32	chr5:112930120-112930170	PANC-1	pancreas:	n/a
33	chr5:112930120-112930170	HIPEpiC	eye:	n/a
34	chr5:112930120-112930170	HepG2	liver:	n/a
35	chr5:112930120-112930170	HNPCEpiC	eye:	n/a
36	chr5:112930120-112930170	HRCEpiC	kidney:	n/a
37	chr5:112930120-112930170	NB4	blood:	n/a
38	chr5:112930120-112930170	SK-N-SH	brain:	n/a
39	chr5:112930120-112930170	HEEpiC	esophagus:	n/a
40	chr5:112930120-112930170	ECC-1	luminal epithelium:	n/a
41	chr5:112930120-112930170	GM12878	blood:	n/a
42	chr5:112930120-112930170	RPTEC	kidney:	n/a
43	chr5:112930120-112930170	MCF10A-Er-Src	breast:	n/a
44	chr5:112930120-112930170	IMR90	lung:	fetal
45	chr5:112930120-112930170	PFSK-1	brain:	n/a
46	chr5:112930120-112930170	AoSMC	blood vessel:	n/a
47	chr5:112930120-112930170	Hela-S3	cervix:	n/a
48	chr5:112930120-112930170	NHBE	bronchial:	n/a
49	chr5:112930120-112930170	HMEC	breast:	n/a
50	chr5:112930120-112930170	SK-N-SH_RA	brain:	n/a

(count:12 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr5:112712448..112713203-chr5:112941932..112942910,3	K562	blood:
2	chr5:112919623..112922323-chr5:112924895..112926616,2	MCF-7	breast:
3	chr5:112672794..112674511-chr5:112933592..112935108,2	MCF-7	breast:
4	chr5:112910971..112913788-chr5:112914677..112918901,4	K562	blood:
5	chr5:112926184..112928429-chr5:112930573..112932971,3	K562	blood:
6	chr5:112911409..112913819-chr5:112914953..112918122,3	K562	blood:
7	chr5:112917130..112919077-chr5:112922484..112924889,2	K562	blood:
8	chr5:112672541..112673176-chr5:112942036..112942852,2	K562	blood:
9	chr5:112923262..112928429-chr5:112929075..112932971,5	K562	blood:
10	chr5:112919623..112922323-chr5:112924895..112926616,2	MCF-7	breast:
11	chr5:112850115..112851621-chr5:112917619..112919519,2	K562	blood:
12	chr5:112917130..112919077-chr5:112922484..112924889,2	K562	blood:

No data

(count:3 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location
1	YTHDC2	hsa-miR-30c-5p	chr5:112930813-112930835
2	YTHDC2	hsa-miR-30c-5p	chr5:112929242-112929264
3	YTHDC2	hsa-miR-96-5p	chr5:112930241-112930263

Variant related genes	Relation type
YTHDC2	TF binding region
YTHDC2	CpG island
ENSG00000047188	chromatin interactions

Extended variants
information (count: 1347 )
Associated
traits (count: 84 )

Variant overlapped rSNPs/rCNVs (count:1347 , 50 per page) page: 1 2 3 4 5 6 7 ... 27

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs10065790	chr5:112911165-112911166	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs564144933	chr5:112911166-112911167	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs112509838	chr5:112911201-112911202	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs547941658	chr5:112911210-112911211	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs185145526	chr5:112911219-112911220	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs530155437	chr5:112911226-112911227	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs548284963	chr5:112911237-112911238	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs569983833	chr5:112911265-112911266	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs78795129	chr5:112911266-112911267	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs374372156	chr5:112911283-112911284	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs559170187	chr5:112911322-112911323	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs570976744	chr5:112911323-112911324	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs139604169	chr5:112911382-112911383	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs6594736	chr5:112911439-112911440	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs574192774	chr5:112911508-112911509	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs541477928	chr5:112911514-112911515	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs556692149	chr5:112911516-112911517	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs372128349	chr5:112911556-112911557	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs375117915	chr5:112911576-112911577	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs145107177	chr5:112911580-112911581	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs545804512	chr5:112911583-112911584	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs147201103	chr5:112911633-112911634	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs189951975	chr5:112911636-112911637	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs540416930	chr5:112911641-112911642	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs149024124	chr5:112911645-112911646	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs372001538	chr5:112911647-112911648	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs559932185	chr5:112911665-112911666	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs80083604	chr5:112911667-112911668	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs548621153	chr5:112911674-112911675	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs538789311	chr5:112911676-112911677	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs569965727	chr5:112911682-112911683	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs386691268	chr5:112911701-112911702	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs6865809	chr5:112911703-112911704	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
34	rs570793183	chr5:112911719-112911720	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs11948284	chr5:112911721-112911722	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs534935481	chr5:112911731-112911732	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs111778031	chr5:112911738-112911739	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs182538128	chr5:112911772-112911773	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs6884704	chr5:112911800-112911801	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
40	rs567881305	chr5:112911811-112911812	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs556993802	chr5:112911900-112911901	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs575160761	chr5:112911901-112911902	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs187185346	chr5:112911911-112911912	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs191516311	chr5:112911931-112911932	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs573169386	chr5:112911950-112911951	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs540482702	chr5:112911979-112911980	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs556860468	chr5:112912019-112912020	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs571858769	chr5:112912065-112912066	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs561871496	chr5:112912070-112912071	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs538902467	chr5:112912082-112912083	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:84)

Disease	PMID	Source
Metanephric adenoma	20802469	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Medulloblastoma	21979893	CNVD
Phyllodes tumor	17334353	CNVD
Malaria	21533027	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	20164919	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Cancer	16751803	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	17603634	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Melanoma	18172304	CNVD
Glioma	20126413	CNVD
Breast cancer	17393978	CNVD
Cancer	21359685	CNVD
Non-small cell lung cancer	21829676	CNVD
adenomatous polyposis	22470819	CNVD
Cancer	22429812	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Liposarcoma	21253554	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Breast cancer	21858162	CNVD
Leukemia	17361228	CNVD
Myelodysplastic syndrome	18508791	CNVD
5q-syndrome	17576883	CNVD
Gastric cancer	17908304	CNVD
Lung cancer	16740712	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Urothelial carcinoma	21177765	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Barrett''s syndrome	19417022	CNVD
Lung cancer	18438408	CNVD
Retinoblastoma	22278416	CNVD
Bipolar disorder	18458673	CNVD
Thyroid cancer	19087340	CNVD
Breast cancer	21785460	CNVD
Squamous cell cancer	20885788	CNVD
Hepatocellular carcinoma	16750200	CNVD
Neurodevelopmental disorder	22521361	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	17133270	CNVD
Acute myeloid leukemia	20729466	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Acute myeloid leukemia	21251322	CNVD
lymphocytic leukemia	21291569	CNVD
Cancer	20164920	CNVD
Myelodysplastic syndrome	21251322	CNVD
abnormal development	18461090	CNVD
Colorectal cancer	16774939	CNVD
Colorectal cancer	16272173	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Multiple myeloma	17550852	CNVD
Ovarian cancer	21720365	CNVD
Neurocytoma	17123091	CNVD
Salivary gland tumor	18059337	CNVD
Myelofibrosis	22110671	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Renal cell carcinoma	19377443	CNVD
Colorectal cancer	21297112	CNVD
Glioblastoma multiforme	22286061	CNVD
Prostate cancer	16461572	CNVD
Sezary syndrome	18413736	CNVD
Prostate cancer	22341455	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Autism	22495309	CNVD

Chromatin state (count:726 , 50 per page) page: 1 2 3 4 5 6 7 ... 15

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:112867400-112926000	Weak transcription	Small Intestine	intestine
2	chr5:112867400-112933000	Weak transcription	H9 Cell Line	embryonic stem cell
3	chr5:112868600-112911400	Strong transcription	Primary T helper cells fromperipheralblood	blood
4	chr5:112870200-112930800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
5	chr5:112872000-112915000	Weak transcription	Hela-S3	cervix
6	chr5:112876000-112918800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
7	chr5:112886600-112911200	Strong transcription	Primary B cells from peripheral blood	blood
8	chr5:112889400-112930600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
9	chr5:112890600-112915800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
10	chr5:112891600-112912600	Weak transcription	Stomach Mucosa	stomach
11	chr5:112892800-112915000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
12	chr5:112894400-112911800	Strong transcription	Monocytes-CD14+_RO01746	blood
13	chr5:112895000-112911400	Strong transcription	Dnd41	blood
14	chr5:112898200-112921200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
15	chr5:112899400-112929400	Weak transcription	HepG2	liver
16	chr5:112900400-112915800	Weak transcription	HUVEC	blood vessel
17	chr5:112901000-112911800	Strong transcription	Primary T cells fromperipheralblood	blood
18	chr5:112901400-112911600	Strong transcription	Adipose Nuclei	Adipose
19	chr5:112901800-112911400	Strong transcription	Primary hematopoietic stem cells short term culture	blood
20	chr5:112902200-112911600	Strong transcription	Primary B cells from cord blood	blood
21	chr5:112903000-112917000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
22	chr5:112904400-112917200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
23	chr5:112904600-112934800	Weak transcription	Psoas Muscle	Psoas
24	chr5:112904800-112916200	Weak transcription	Fetal Heart	heart
25	chr5:112906400-112911400	Strong transcription	Primary T helper cells PMA-I stimulated	--
26	chr5:112906800-112911400	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
27	chr5:112907200-112915600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
28	chr5:112907400-112915600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
29	chr5:112907400-112932000	Weak transcription	Rectal Smooth Muscle	rectum
30	chr5:112908400-112911400	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
31	chr5:112908600-112911400	Strong transcription	Rectal Mucosa Donor 29	rectum
32	chr5:112908800-112911400	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
33	chr5:112908800-112916000	Weak transcription	Fetal Brain Male	brain
34	chr5:112908800-112935200	Weak transcription	Pancreatic Islets	Pancreatic Islet
35	chr5:112909000-112911800	Strong transcription	Primary T cells from cord blood	blood
36	chr5:112909200-112911200	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
37	chr5:112909200-112911400	Strong transcription	Duodenum Smooth Muscle	Duodenum
38	chr5:112909200-112912000	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
39	chr5:112909400-112911200	Strong transcription	Brain Germinal Matrix	brain
40	chr5:112909400-112911400	Strong transcription	Fetal Muscle Leg	muscle
41	chr5:112909400-112911400	Strong transcription	Fetal Thymus	thymus
42	chr5:112909400-112912200	Strong transcription	Liver	Liver
43	chr5:112909600-112911600	Strong transcription	Primary monocytes fromperipheralblood	blood
44	chr5:112909600-112915600	Weak transcription	Fetal Kidney	kidney
45	chr5:112909800-112911400	Strong transcription	Stomach Smooth Muscle	stomach
46	chr5:112910000-112911200	Strong transcription	Primary hematopoietic stem cells	blood
47	chr5:112910000-112911200	Strong transcription	Skeletal Muscle Male	skeletal muscle
48	chr5:112910000-112911800	Strong transcription	Breast Myoepithelial Primary Cells	Breast
49	chr5:112910200-112915600	Weak transcription	NHLF	lung
50	chr5:112910400-112915600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links