Variant report

Variant	nsv520878
Chromosome Location	chr12:25054891-25056065
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:106)
CpG islands
(count:671)
Chromatin interactive
region (count:0)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:106 , 50 per page) page: 1 2 3

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BACH1	chr12:25054853-25055764	H1-hESC	embryonic stem cell:	n/a	n/a
2	BCLAF1	chr12:25055404-25055735	GM12878	blood:	n/a	n/a
3	CCNT2	chr12:25055572-25056008	K562	blood:	n/a	n/a
4	CHD1	chr12:25054799-25055366	H1-hESC	embryonic stem cell:	n/a	n/a
5	CHD1	chr12:25055747-25056229	H1-hESC	embryonic stem cell:	n/a	chr12:25056219-25056226
6	CHD2	chr12:25055045-25055390	H1-hESC	embryonic stem cell:	n/a	n/a
7	CHD2	chr12:25055626-25055700	GM12878	blood:	n/a	n/a
8	CREB1	chr12:25055602-25056299	H1-hESC	embryonic stem cell:	n/a	n/a
9	CTBP2	chr12:25054870-25056625	H1-hESC	embryonic stem cell:	n/a	n/a
10	CTCF	chr12:25055160-25055310	HCPEpiC	choroid plexus:	n/a	n/a
11	CTCF	chr12:25055262-25055318	H1-hESC	embryonic stem cell:	n/a	n/a
12	CTCF	chr12:25055120-25055270	HAc	cerebellar:	n/a	n/a
13	CTCF	chr12:25055180-25055330	HRPEpiC	eye:	n/a	n/a
14	CTCF	chr12:25055200-25055350	AG04449	skin:	n/a	n/a
15	CTCF	chr12:25055240-25055390	BJ	skin:	n/a	n/a
16	CTCF	chr12:25055220-25055370	BJ	skin:	n/a	n/a
17	CTCF	chr12:25055800-25055950	GM12871	blood:	n/a	n/a
18	CTCF	chr12:25054960-25055110	HUVEC	blood vessel:	n/a	n/a
19	E2F6	chr12:25054878-25056273	H1-hESC	embryonic stem cell:	n/a	chr12:25056219-25056226
20	EBF1	chr12:25055340-25055790	GM12878	blood:	n/a	n/a
21	EBF1	chr12:25055830-25056170	GM12878	blood:	n/a	chr12:25056099-25056108
22	ELF1	chr12:25055399-25056278	GM12878	blood:	n/a	chr12:25056188-25056200
23	FOXM1	chr12:25055561-25056052	GM12878	blood:	n/a	n/a
24	FOXM1	chr12:25055410-25056111	GM12878	blood:	n/a	n/a
25	GTF2F1	chr12:25055815-25056081	H1-hESC	embryonic stem cell:	n/a	n/a
26	GTF2F1	chr12:25055191-25055489	H1-hESC	embryonic stem cell:	n/a	n/a
27	JUND	chr12:25055594-25056350	H1-hESC	embryonic stem cell:	n/a	n/a
28	MAX	chr12:25055464-25056270	H1-hESC	embryonic stem cell:	n/a	n/a
29	MAX	chr12:25054726-25056546	H1-hESC	embryonic stem cell:	n/a	n/a
30	MAX	chr12:25054812-25055422	H1-hESC	embryonic stem cell:	n/a	n/a
31	MAX	chr12:25055078-25055391	H1-hESC	embryonic stem cell:	n/a	n/a
32	MAX	chr12:25055232-25056072	GM12878	blood:	n/a	n/a
33	MAZ	chr12:25054934-25055046	K562	blood:	n/a	n/a
34	MAZ	chr12:25055679-25055788	GM12878	blood:	n/a	n/a
35	MTA3	chr12:25055905-25056910	GM12878	blood:	n/a	n/a
36	MTA3	chr12:25055361-25055843	GM12878	blood:	n/a	n/a
37	MTA3	chr12:25055364-25056737	GM12878	blood:	n/a	n/a
38	MXI1	chr12:25055736-25055912	GM12878	blood:	n/a	n/a
39	MXI1	chr12:25054838-25055393	H1-hESC	embryonic stem cell:	n/a	n/a
40	MYC	chr12:25055012-25055374	H1-hESC	embryonic stem cell:	n/a	n/a
41	MYC	chr12:25055176-25055358	HUVEC	blood vessel:	n/a	n/a
42	MYC	chr12:25055974-25056012	GM12878	blood:	n/a	n/a
43	NFIC	chr12:25055105-25056082	GM12878	blood:	n/a	n/a
44	PAX5	chr12:25055769-25056131	GM12892	blood:	n/a	n/a
45	PAX5	chr12:25055568-25056042	GM12878	blood:	n/a	n/a
46	PBX3	chr12:25055129-25055279	GM12878	blood:	n/a	n/a
47	PML	chr12:25053730-25057048	GM12878	blood:	n/a	chr12:25054062-25054071
48	POLR2A	chr12:25055450-25055547	GM12878	blood:	n/a	n/a
49	POLR2A	chr12:25055117-25056633	GM12878	blood:	n/a	n/a
50	POLR2A	chr12:25053871-25057036	HUVEC	blood vessel:	n/a	n/a

(count:671 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr12:25054873-25054923	PFSK-1	brain:	n/a
2	chr12:25054873-25054923	CMK	blood:	n/a
3	chr12:25055381-25055431	LNCaP	prostate:	n/a
4	chr12:25055518-25055568	HRE	kidney:	n/a
5	chr12:25055304-25055354	GM19239	blood:	n/a
6	chr12:25055304-25055354	GM06990	blood:	n/a
7	chr12:25055967-25056017	HCM	heart:	n/a
8	chr12:25055421-25055471	Hepatocyte	liver:	n/a
9	chr12:25055214-25055264	AG04450	lung:	fetal
10	chr12:25055967-25056017	ovcar-3	ovarian:	n/a
11	chr12:25055262-25055312	AoSMC	blood vessel:	n/a
12	chr12:25054905-25054955	K562	blood:	n/a
13	chr12:25055967-25056017	AG10803	skin:	n/a
14	chr12:25055967-25056017	K562	blood:	n/a
15	chr12:25054905-25054955	GM06990	blood:	n/a
16	chr12:25055676-25055726	AG04449	skin:	fetal
17	chr12:25055676-25055726	GM12878	blood:	n/a
18	chr12:25055108-25055158	HRCEpiC	kidney:	n/a
19	chr12:25054873-25054923	Jurkat	blood:	n/a
20	chr12:25055676-25055726	HCPEpiC	choroid plexus:	n/a
21	chr12:25055214-25055264	AG10803	skin:	n/a
22	chr12:25054905-25054955	HCM	heart:	n/a
23	chr12:25055108-25055158	HRPEpiC	eye:	n/a
24	chr12:25055967-25056017	HCT-116	colon:	n/a
25	chr12:25054905-25054955	SK-N-SH_RA	brain:	n/a
26	chr12:25055381-25055431	HUVEC	blood vessel:	n/a
27	chr12:25054873-25054923	HPAEpiC	pulmonary alveolar:	n/a
28	chr12:25055381-25055431	AG09309	skin:	n/a
29	chr12:25055518-25055568	PFSK-1	brain:	n/a
30	chr12:25054905-25054955	MCF-7	breast:	n/a
31	chr12:25055518-25055568	GM12891	blood:	n/a
32	chr12:25055304-25055354	PrEC	prostate:	n/a
33	chr12:25055967-25056017	MCF-7	breast:	n/a
34	chr12:25055108-25055158	SK-N-SH	brain:	n/a
35	chr12:25054873-25054923	PANC-1	pancreas:	n/a
36	chr12:25055262-25055312	SKMC	muscle:	n/a
37	chr12:25055214-25055264	AoSMC	blood vessel:	n/a
38	chr12:25055421-25055471	HL-60	blood:	n/a
39	chr12:25055421-25055471	ovcar-3	ovarian:	n/a
40	chr12:25055262-25055312	PANC-1	pancreas:	n/a
41	chr12:25055421-25055471	NH-A	brain:	n/a
42	chr12:25055214-25055264	HRPEpiC	eye:	n/a
43	chr12:25055421-25055471	AG09309	skin:	n/a
44	chr12:25054873-25054923	HL-60	blood:	n/a
45	chr12:25055421-25055471	BE2_C	brain:	n/a
46	chr12:25054905-25054955	HL-60	blood:	n/a
47	chr12:25055421-25055471	PFSK-1	brain:	n/a
48	chr12:25054873-25054923	HCT-116	colon:	n/a
49	chr12:25055676-25055726	HNPCEpiC	eye:	n/a
50	chr12:25054905-25054955	GM12892	blood:	n/a

No data

Variant related genes	Relation type
BCAT1	TF binding region
ENSG00000268865	TF binding region
BCAT1	CpG island
ENSG00000268865	CpG island

Extended variants
information (count: 48 )
Associated
traits (count: 89 )

Variant overlapped rSNPs/rCNVs (count:48 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2291894	chr12:25054891-25054892	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs377307213	chr12:25054906-25054907	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
3	rs561585434	chr12:25054924-25054925	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
4	rs187827404	chr12:25054943-25054944	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
5	rs550307893	chr12:25054986-25054987	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region	1 gene(s)	Overlapped CNVs	n/a
6	rs2291895	chr12:25055006-25055007	Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
7	rs2291896	chr12:25055020-25055021	Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
8	rs143537395	chr12:25055038-25055039	Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region	1 gene(s)	Overlapped CNVs	n/a
9	rs192509652	chr12:25055062-25055063	Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region	1 gene(s)	Overlapped CNVs	n/a
10	rs35566363	chr12:25055063-25055064	Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region	1 gene(s)	Overlapped CNVs	n/a
11	rs566208310	chr12:25055067-25055068	Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region	1 gene(s)	Overlapped CNVs	n/a
12	rs533759356	chr12:25055160-25055161	Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region	1 gene(s)	Overlapped CNVs	n/a
13	rs116371093	chr12:25055177-25055178	Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region	1 gene(s)	Overlapped CNVs	n/a
14	rs567456405	chr12:25055308-25055309	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
15	rs61912177	chr12:25055321-25055322	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs556176395	chr12:25055351-25055352	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
17	rs80119911	chr12:25055366-25055367	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
18	rs34677835	chr12:25055374-25055375	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
19	rs114026793	chr12:25055404-25055405	Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Weak transcription	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
20	rs553292325	chr12:25055420-25055421	Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Weak transcription	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
21	rs554332259	chr12:25055448-25055449	Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Weak transcription	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
22	rs117368398	chr12:25055493-25055494	Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
23	rs3759085	chr12:25055512-25055513	Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Weak transcription	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs147147948	chr12:25055531-25055532	Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Weak transcription	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
25	rs545766623	chr12:25055579-25055580	Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
26	rs559192341	chr12:25055581-25055582	Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
27	rs576556055	chr12:25055590-25055591	Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
28	rs184488682	chr12:25055623-25055624	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Weak transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
29	rs565420986	chr12:25055640-25055641	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Weak transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
30	rs532971842	chr12:25055649-25055650	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Weak transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
31	rs188519206	chr12:25055652-25055653	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Weak transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
32	rs559830934	chr12:25055691-25055692	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Weak transcription ZNF genes & repeats	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
33	rs527343407	chr12:25055708-25055709	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Weak transcription ZNF genes & repeats	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
34	rs548667080	chr12:25055726-25055727	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Weak transcription ZNF genes & repeats	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
35	rs146177344	chr12:25055735-25055736	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Weak transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
36	rs563951814	chr12:25055741-25055742	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Weak transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
37	rs550076792	chr12:25055787-25055788	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Weak transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
38	rs571425782	chr12:25055796-25055797	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Weak transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
39	rs539053675	chr12:25055819-25055820	Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Enhancers Weak transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
40	rs554170690	chr12:25055827-25055828	Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Enhancers Weak transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
41	rs569306107	chr12:25055906-25055907	Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Enhancers Weak transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
42	rs566183356	chr12:25055931-25055932	Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Enhancers Weak transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
43	rs74528004	chr12:25055943-25055944	Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Enhancers Weak transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
44	rs554755175	chr12:25055949-25055950	Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Enhancers Weak transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
45	rs528595785	chr12:25055957-25055958	Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Enhancers Weak transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
46	rs576607882	chr12:25055962-25055963	Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Enhancers Weak transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
47	rs543629085	chr12:25056000-25056001	Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Enhancers Weak transcription ZNF genes & repeats	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
48	rs11047699	chr12:25056065-25056066	Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Enhancers Weak transcription ZNF genes & repeats	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a

Variant related diseases (count:89)

Disease	PMID	Source
Malignant germ cell tumour	17285132	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Melanoma	18172304	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Myxofibrosarcoma	16751306	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Wilms tumour	21544195	CNVD
Squamous cell cancer	21044232	CNVD
Acute myeloid leukemia	16864856	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Colorectal cancer	20709793	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Testicular cancer	18059402	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Seminomas	18059402	CNVD
Esophageal cancer	21851588	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Testicular germ cell tumor	18059402	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Basal cell lymphoma	17053054	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Ewing''s sarcoma	17952124	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Breast cancer	21858162	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Myelodysplastic syndrome	21251322	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Cancer	20164919	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	17133270	CNVD
Ependymoma	18628472	CNVD
Leukemia	18628472	CNVD
Acute myeloid leukemia	20729466	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	16397240	CNVD
Neurodevelopmental disorder	22521361	CNVD
Intracranial aneurysm	16715129	CNVD
Breast cancer	21509527	CNVD
Autism	22102821	CNVD
Follicular lymphoma	18703704	CNVD
Lung cancer	18438408	CNVD
Lung cancer	21911935	CNVD
Breast cancer	22048815	CNVD
Malignant peripheral nerve sheath tumor	19844265	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	16272173	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Heart disease	21282601	CNVD
Ovarian cancer	20844748	CNVD
Lung cancer	17925434	CNVD
Non-small cell lung cancer	21829676	CNVD
Ovarian neoplasms	16753589	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Gastric cancer	24379144	CNVD
Gastric cancer	19545448	CNVD
Lung cancer	20031968	CNVD
Lung adenocarcinoma	19525976	CNVD
Lung adenocarcinoma	19826477	CNVD
Lung cancer	19525976	CNVD
Lung cancer	19826477	CNVD
Non-small cell lung cancer	19451690	CNVD
Non-small cell lung cancer	17504988	CNVD
Bipolar disorder	19114987	CNVD
Lung cancer	19671679	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Breast cancer	21364760	CNVD
Lung cancer	21569311	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Lung adenocarcinoma	17982442	CNVD
Gastrointestinal stromal cancer	20877625	CNVD

Chromatin state (count:261 , 50 per page) page: 1 2 3 4 5 6

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:25015600-25055200	Weak transcription	Aorta	Aorta
2	chr12:25031200-25063600	Weak transcription	HepG2	liver
3	chr12:25048200-25055000	Weak transcription	Esophagus	oesophagus
4	chr12:25052200-25055600	Weak transcription	Ovary	ovary
5	chr12:25053200-25055000	Enhancers	Primary monocytes fromperipheralblood	blood
6	chr12:25053200-25057200	Flanking Active TSS	HUVEC	blood vessel
7	chr12:25053400-25055000	Enhancers	NHEK	skin
8	chr12:25053400-25055400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
9	chr12:25053600-25055200	Enhancers	HMEC	breast
10	chr12:25053600-25055400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
11	chr12:25053600-25057000	Active TSS	Brain Anterior Caudate	brain
12	chr12:25053800-25055200	Enhancers	NHDF-Ad	bronchial
13	chr12:25054000-25055000	Flanking Active TSS	HUES6 Cell Line	embryonic stem cell
14	chr12:25054000-25055000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
15	chr12:25054000-25055000	Enhancers	Fetal Brain Male	brain
16	chr12:25054000-25055000	Enhancers	NHLF	lung
17	chr12:25054000-25055200	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
18	chr12:25054000-25055200	Weak transcription	Placenta	Placenta
19	chr12:25054000-25056000	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
20	chr12:25054000-25056400	Active TSS	Brain Angular Gyrus	brain
21	chr12:25054000-25056600	Active TSS	Fetal Brain Female	brain
22	chr12:25054000-25056800	Bivalent/Poised TSS	Fetal Kidney	kidney
23	chr12:25054000-25057200	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
24	chr12:25054200-25055000	Flanking Active TSS	HUES48 Cell Line	embryonic stem cell
25	chr12:25054200-25055000	Enhancers	Primary hematopoietic stem cells short term culture	blood
26	chr12:25054200-25055200	Enhancers	Dnd41	blood
27	chr12:25054200-25055800	Flanking Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
28	chr12:25054200-25055800	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
29	chr12:25054200-25056400	Active TSS	Brain Inferior Temporal Lobe	brain
30	chr12:25054200-25056600	Active TSS	Brain Hippocampus Middle	brain
31	chr12:25054200-25057000	Active TSS	Brain Substantia Nigra	brain
32	chr12:25054400-25055000	Bivalent Enhancer	Primary T helper cells PMA-I stimulated	--
33	chr12:25054400-25055000	Flanking Active TSS	Brain Cingulate Gyrus	brain
34	chr12:25054400-25055400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
35	chr12:25054400-25055400	Enhancers	Placenta Amnion	Placenta Amnion
36	chr12:25054600-25055000	Flanking Active TSS	H1 Cell Line	embryonic stem cell
37	chr12:25054600-25055000	Flanking Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
38	chr12:25054600-25055000	Bivalent Enhancer	Primary neutrophils fromperipheralblood	blood
39	chr12:25054600-25055000	Enhancers	Primary T cells from cord blood	blood
40	chr12:25054600-25055000	Active TSS	Brain Germinal Matrix	brain
41	chr12:25054600-25055000	Enhancers	Colonic Mucosa	Colon
42	chr12:25054600-25055200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
43	chr12:25054600-25055200	Flanking Active TSS	HSMM	muscle
44	chr12:25054600-25055200	Flanking Active TSS	HSMMtube	muscle
45	chr12:25054600-25055600	Active TSS	Psoas Muscle	Psoas
46	chr12:25054600-25055600	Bivalent/Poised TSS	Stomach Smooth Muscle	stomach
47	chr12:25054600-25055800	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
48	chr12:25054600-25055800	Flanking Active TSS	NH-A	brain
49	chr12:25054600-25056400	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
50	chr12:25054600-25056800	Active TSS	H9 Cell Line	embryonic stem cell

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