Variant report

Variant rs61912177
Chromosome Location chr12:25055321-25055322
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:25031200-25063600 Weak transcription HepG2 liver
2 chr12:25052200-25055600 Weak transcription Ovary ovary
3 chr12:25053200-25057200 Flanking Active TSS HUVEC blood vessel
4 chr12:25053400-25055400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr12:25053600-25055400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
6 chr12:25053600-25057000 Active TSS Brain Anterior Caudate brain
7 chr12:25054000-25056000 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
8 chr12:25054000-25056400 Active TSS Brain Angular Gyrus brain
9 chr12:25054000-25056600 Active TSS Fetal Brain Female brain
10 chr12:25054000-25056800 Bivalent/Poised TSS Fetal Kidney kidney
11 chr12:25054000-25057200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
12 chr12:25054200-25055800 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr12:25054200-25055800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
14 chr12:25054200-25056400 Active TSS Brain Inferior Temporal Lobe brain
15 chr12:25054200-25056600 Active TSS Brain Hippocampus Middle brain
16 chr12:25054200-25057000 Active TSS Brain Substantia Nigra brain
17 chr12:25054400-25055400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr12:25054400-25055400 Enhancers Placenta Amnion Placenta Amnion
19 chr12:25054600-25055600 Active TSS Psoas Muscle Psoas
20 chr12:25054600-25055600 Bivalent/Poised TSS Stomach Smooth Muscle stomach
21 chr12:25054600-25055800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
22 chr12:25054600-25055800 Flanking Active TSS NH-A brain
23 chr12:25054600-25056400 Active TSS Brain Dorsolateral Prefrontal Cortex brain
24 chr12:25054600-25056800 Active TSS H9 Cell Line embryonic stem cell
25 chr12:25054600-25056800 Flanking Active TSS Cortex derived primary cultured neurospheres brain
26 chr12:25054600-25057200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr12:25054800-25055400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr12:25054800-25055400 Bivalent Enhancer Primary T cells fromperipheralblood blood
29 chr12:25054800-25055400 Enhancers Primary T killer memory cells from peripheral blood blood
30 chr12:25054800-25055400 Flanking Bivalent TSS/Enh Fetal Muscle Leg muscle
31 chr12:25054800-25055400 Flanking Active TSS Osteobl bone
32 chr12:25054800-25055600 Bivalent/Poised TSS Left Ventricle heart
33 chr12:25054800-25055600 Enhancers Pancreas Pancrea
34 chr12:25054800-25055600 Weak transcription K562 blood
35 chr12:25054800-25055800 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr12:25054800-25056000 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr12:25054800-25056000 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
38 chr12:25054800-25056000 Bivalent/Poised TSS Primary T regulatory cells fromperipheralblood blood
39 chr12:25054800-25056000 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
40 chr12:25054800-25056200 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr12:25054800-25056200 Active TSS iPS-18 Cell Line embryonic stem cell
42 chr12:25054800-25056200 Active TSS iPS-20b Cell Line embryonic stem cell
43 chr12:25054800-25056200 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin01 Skin
44 chr12:25054800-25056400 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
45 chr12:25054800-25056400 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr12:25054800-25056400 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
47 chr12:25054800-25056400 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
48 chr12:25054800-25056600 Active TSS ES-I3 Cell Line embryonic stem cell
49 chr12:25054800-25056600 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
50 chr12:25054800-25056800 Active TSS ES-WA7 Cell Line embryonic stem cell

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