Variant report

Variant	nsv522465
Chromosome Location	chr5:95347786-95425199
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:883)
CpG islands
(count:305)
Chromatin interactive
region (count:59)
LncRNA
region (count:1)
Mature miRNA
region (count: 1)
miRNA target
sites (count:0)

(count:883 , 50 per page) page: 1 2 3 4 5 6 7 ... 18

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr5:95372942-95373299	HepG2	liver:	n/a	n/a
2	ARID3A	chr5:95359091-95359108	K562	blood:	n/a	n/a
3	ARID3A	chr5:95351898-95352274	HepG2	liver:	n/a	n/a
4	ARID3A	chr5:95352030-95352315	K562	blood:	n/a	n/a
5	ARID3A	chr5:95353956-95354116	HepG2	liver:	n/a	n/a
6	ARID3A	chr5:95384538-95384656	K562	blood:	n/a	n/a
7	ATF1	chr5:95352046-95352289	K562	blood:	n/a	n/a
8	ATF1	chr5:95353678-95353980	K562	blood:	n/a	n/a
9	BACH1	chr5:95419522-95419564	H1-hESC	embryonic stem cell:	n/a	n/a
10	BACH1	chr5:95403155-95403208	K562	blood:	n/a	n/a
11	BACH1	chr5:95403879-95404090	K562	blood:	n/a	chr5:95403900-95403914
12	BCL11A	chr5:95419203-95419420	H1-hESC	embryonic stem cell:	n/a	n/a
13	BCLAF1	chr5:95403803-95404304	K562	blood:	n/a	chr5:95403903-95403912
14	BCLAF1	chr5:95403762-95404353	K562	blood:	n/a	chr5:95403903-95403912
15	BHLHE40	chr5:95416311-95416524	K562	blood:	n/a	n/a
16	BHLHE40	chr5:95351971-95352249	K562	blood:	n/a	n/a
17	BHLHE40	chr5:95403758-95403763	K562	blood:	n/a	n/a
18	BHLHE40	chr5:95414995-95415053	K562	blood:	n/a	n/a
19	BHLHE40	chr5:95384654-95384708	K562	blood:	n/a	n/a
20	BRCA1	chr5:95414824-95415041	Hela-S3	cervix:	n/a	n/a
21	BRCA1	chr5:95403730-95404260	Hela-S3	cervix:	n/a	n/a
22	BRCA1	chr5:95353672-95353988	Hela-S3	cervix:	n/a	n/a
23	CBX3	chr5:95403471-95404286	HCT-116	colon:	n/a	n/a
24	CBX3	chr5:95414735-95415297	HCT-116	colon:	n/a	n/a
25	CBX3	chr5:95373344-95373712	K562	blood:	n/a	n/a
26	CCNT2	chr5:95353748-95353935	K562	blood:	n/a	n/a
27	CCNT2	chr5:95352071-95352262	K562	blood:	n/a	chr5:95352194-95352214
28	CCNT2	chr5:95403725-95404183	K562	blood:	n/a	n/a
29	CEBPB	chr5:95406141-95406784	A549	lung:	n/a	n/a
30	CEBPB	chr5:95414849-95415205	Hela-S3	cervix:	n/a	n/a
31	CEBPB	chr5:95406278-95406724	A549	lung:	n/a	n/a
32	CEBPB	chr5:95406343-95406589	K562	blood:	n/a	n/a
33	CEBPB	chr5:95406283-95406637	HepG2	liver:	n/a	n/a
34	CEBPB	chr5:95383405-95383673	IMR90	lung:	n/a	n/a
35	CEBPB	chr5:95420917-95421217	MCF-7	breast:	n/a	n/a
36	CEBPB	chr5:95372926-95373183	HepG2	liver:	n/a	n/a
37	CEBPB	chr5:95414609-95415107	A549	lung:	n/a	n/a
38	CEBPB	chr5:95353652-95354145	IMR90	lung:	n/a	n/a
39	CEBPB	chr5:95353644-95354045	Hela-S3	cervix:	n/a	n/a
40	CEBPB	chr5:95406304-95406682	MCF-7	breast:	n/a	n/a
41	CEBPB	chr5:95423791-95424028	A549	lung:	n/a	chr5:95423882-95423893 chr5:95423881-95423892 chr5:95423881-95423894
42	CEBPB	chr5:95359352-95359560	IMR90	lung:	n/a	n/a
43	CEBPB	chr5:95414780-95415285	A549	lung:	n/a	n/a
44	CEBPB	chr5:95420890-95421191	A549	lung:	n/a	n/a
45	CEBPB	chr5:95403660-95404199	Hela-S3	cervix:	n/a	n/a
46	CEBPB	chr5:95423714-95424007	HepG2	liver:	n/a	chr5:95423882-95423893 chr5:95423881-95423892 chr5:95423881-95423894
47	CEBPB	chr5:95420762-95421218	Hela-S3	cervix:	n/a	n/a
48	CEBPB	chr5:95372902-95373190	Hela-S3	cervix:	n/a	n/a
49	CEBPB	chr5:95384425-95384748	K562	blood:	n/a	n/a
50	CEBPB	chr5:95414829-95415196	IMR90	lung:	n/a	n/a

(count:305 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr5:95409135-95409185	HRE	kidney:	n/a
2	chr5:95413871-95413921	T-47D	breast:	n/a
3	chr5:95413861-95413911	K562	blood:	n/a
4	chr5:95413861-95413911	GM12891	blood:	n/a
5	chr5:95409135-95409185	AG09319	gingival:	n/a
6	chr5:95361197-95361247	GM12892	blood:	n/a
7	chr5:95413861-95413911	PrEC	prostate:	n/a
8	chr5:95409135-95409185	HUVEC	blood vessel:	n/a
9	chr5:95361197-95361247	AG04449	skin:	fetal
10	chr5:95413871-95413921	GM12892	blood:	n/a
11	chr5:95361197-95361247	H1-hESC	embryonic stem cell:	embryo
12	chr5:95419503-95419553	AoSMC	blood vessel:	n/a
13	chr5:95413871-95413921	HRE	kidney:	n/a
14	chr5:95413861-95413911	HL-60	blood:	n/a
15	chr5:95413861-95413911	AG09319	gingival:	n/a
16	chr5:95409135-95409185	Jurkat	blood:	n/a
17	chr5:95413861-95413911	GM06990	blood:	n/a
18	chr5:95413861-95413911	HEEpiC	esophagus:	n/a
19	chr5:95361197-95361247	NB4	blood:	n/a
20	chr5:95413871-95413921	AG09309	skin:	n/a
21	chr5:95413861-95413911	NB4	blood:	n/a
22	chr5:95413861-95413911	BE2_C	brain:	n/a
23	chr5:95409135-95409185	BE2_C	brain:	n/a
24	chr5:95413861-95413911	NHDF-neo	bronchial:	n/a
25	chr5:95413861-95413911	MCF-7	breast:	n/a
26	chr5:95409135-95409185	T-47D	breast:	n/a
27	chr5:95413871-95413921	HNPCEpiC	eye:	n/a
28	chr5:95361197-95361247	GM06990	blood:	n/a
29	chr5:95413861-95413911	SAEC	small airway:	n/a
30	chr5:95361197-95361247	U87	brain:	n/a
31	chr5:95361197-95361247	HIPEpiC	eye:	n/a
32	chr5:95419503-95419553	CMK	blood:	n/a
33	chr5:95361197-95361247	Hepatocyte	liver:	n/a
34	chr5:95413871-95413921	GM19239	blood:	n/a
35	chr5:95413871-95413921	SK-N-MC	brain:	n/a
36	chr5:95409135-95409185	HCF	heart:	n/a
37	chr5:95413871-95413921	NH-A	brain:	n/a
38	chr5:95413861-95413911	HMEC	breast:	n/a
39	chr5:95419503-95419553	Hepatocyte	liver:	n/a
40	chr5:95413861-95413911	HCPEpiC	choroid plexus:	n/a
41	chr5:95413861-95413911	Hela-S3	cervix:	n/a
42	chr5:95409135-95409185	AG04449	skin:	fetal
43	chr5:95409135-95409185	SKMC	muscle:	n/a
44	chr5:95419503-95419553	HIPEpiC	eye:	n/a
45	chr5:95361197-95361247	HMEC	breast:	n/a
46	chr5:95361197-95361247	A549	lung:	n/a
47	chr5:95409135-95409185	SK-N-SH	brain:	n/a
48	chr5:95419503-95419553	GM12891	blood:	n/a
49	chr5:95361197-95361247	HAEpiC	amniotic membrane:	n/a
50	chr5:95413871-95413921	CMK	blood:	n/a

(count:59 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr5:95296290..95298423-chr5:95423602..95425943,2	MCF-7	breast:
2	chr5:95363683..95365395-chr5:95366901..95369484,2	K562	blood:
3	chr5:95401885..95403759-chr5:95409386..95411340,2	K562	blood:
4	chr5:95296910..95298799-chr5:95356285..95359042,2	K562	blood:
5	chr5:95394397..95397979-chr5:95402204..95405493,4	K562	blood:
6	chr5:95399534..95401780-chr5:95407826..95410205,2	K562	blood:
7	chr5:95259027..95261912-chr5:95403568..95405178,2	K562	blood:
8	chr11:64013141..64015957-chr5:95386899..95388399,2	MCF-7	breast:
9	chr5:95360554..95363561-chr5:95366063..95368612,3	K562	blood:
10	chr5:95360554..95363561-chr5:95366063..95368612,3	K562	blood:
11	chr5:95406044..95407989-chr5:95410489..95412810,2	K562	blood:
12	chr5:95385578..95388383-chr5:95402339..95405273,2	K562	blood:
13	chr5:95296442..95299221-chr5:95402366..95405358,3	K562	blood:
14	chr5:95295655..95298675-chr5:95421963..95424725,3	MCF-7	breast:
15	chr5:95416575..95419199-chr5:95425271..95427989,2	K562	blood:
16	chr5:95398261..95399913-chr5:95401508..95403607,2	K562	blood:
17	chr5:95359766..95362858-chr5:95371780..95373834,3	MCF-7	breast:
18	chr5:95385578..95387448-chr5:95403301..95405273,2	K562	blood:
19	chr5:95372818..95374675-chr5:95378795..95380652,2	MCF-7	breast:
20	chr5:95401831..95405579-chr5:95411274..95417557,7	K562	blood:
21	chr5:95417552..95419052-chr5:95421414..95423793,2	MCF-7	breast:
22	chr5:95395858..95398808-chr5:95403139..95405435,2	K562	blood:
23	chr5:95362269..95364371-chr5:95402115..95403817,2	K562	blood:
24	chr5:95403553..95405838-chr5:95406923..95410499,3	K562	blood:
25	chr5:95363657..95366374-chr5:95368522..95371027,2	MCF-7	breast:
26	chr5:95384196..95387378-chr5:95390090..95391967,3	K562	blood:
27	chr5:95403553..95405838-chr5:95406923..95410499,3	K562	blood:
28	chr5:95296314..95298555-chr5:95397660..95400268,2	K562	blood:
29	chr5:95194068..95196070-chr5:95401310..95403656,2	K562	blood:
30	chr5:95334613..95336349-chr5:95402257..95404926,2	K562	blood:
31	chr5:95359766..95362858-chr5:95371780..95373834,3	MCF-7	breast:
32	chr5:95411135..95413386-chr5:95414339..95416415,2	K562	blood:
33	chr5:95294090..95296695-chr5:95356956..95358736,2	K562	blood:
34	chr5:95351011..95353911-chr5:95402617..95404215,2	K562	blood:
35	chr5:95384364..95386228-chr5:95387078..95389044,2	K562	blood:
36	chr5:95390171..95391884-chr5:95392902..95395243,2	K562	blood:
37	chr5:95406044..95407989-chr5:95410489..95412810,2	K562	blood:
38	chr5:95399534..95401780-chr5:95407826..95410205,2	K562	blood:
39	chr5:95408446..95411161-chr5:95411273..95412980,2	K562	blood:
40	chr5:95402259..95403987-chr5:95413723..95416198,2	K562	blood:
41	chr5:95372818..95374675-chr5:95378795..95380652,2	MCF-7	breast:
42	chr5:95262626..95265334-chr5:95402014..95404790,2	K562	blood:
43	chr5:95296726..95298627-chr5:95417154..95418671,2	MCF-7	breast:
44	chr5:95363657..95366374-chr5:95368522..95371027,2	MCF-7	breast:
45	chr5:95192803..95195845-chr5:95402156..95405628,4	K562	blood:
46	chr5:95401885..95403759-chr5:95409386..95411340,2	K562	blood:
47	chr5:95296782..95299195-chr5:95402497..95405358,3	K562	blood:
48	chr5:95398261..95399913-chr5:95401508..95403607,2	K562	blood:
49	chr5:95296231..95298202-chr5:95371056..95372848,2	MCF-7	breast:
50	chr5:95363683..95365395-chr5:95366901..95369484,2	K562	blood:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-C5orf27-3	chr5:95385819-95385905	ENSG00000250551

miRNA name	Chromosome Location	mirBase accession
hsa-miR-583	chr5:95414857-95414877	MIMAT0003248

No data

Variant related genes	Relation type
MIR583	TF binding region
ENSG00000250551	TF binding region
MIR583	CpG island
ENSG00000250551	CpG island
ENSG00000207578	chromatin interactions
ENSG00000250551	chromatin interactions
ENSG00000118985	chromatin interactions
ENSG00000256940	chromatin interactions
ENSG00000251314	chromatin interactions
ENSG00000173457	chromatin interactions

Extended variants
information (count: 2443 )
Associated
traits (count: 81 )

Variant overlapped rSNPs/rCNVs (count:2443 , 50 per page) page: 1 2 3 4 5 6 7 ... 49

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs6556898	chr5:95347786-95347787	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs529692137	chr5:95347801-95347802	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs534190998	chr5:95347848-95347849	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs553953403	chr5:95347872-95347873	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs78289334	chr5:95347875-95347876	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs137919926	chr5:95347921-95347922	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs185725667	chr5:95347964-95347965	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs576417984	chr5:95348040-95348041	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs545051634	chr5:95348060-95348061	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs565250254	chr5:95348089-95348090	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs73771840	chr5:95348201-95348202	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs188873798	chr5:95348530-95348531	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs114636736	chr5:95348535-95348536	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs76795401	chr5:95348539-95348540	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs75563060	chr5:95348540-95348541	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs77488844	chr5:95348541-95348542	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs529840139	chr5:95348558-95348559	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs141695733	chr5:95348581-95348582	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs181629569	chr5:95348656-95348657	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs75201955	chr5:95348781-95348782	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs558482433	chr5:95348846-95348847	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs565294610	chr5:95348870-95348871	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs537175253	chr5:95348899-95348900	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs575253823	chr5:95348999-95349000	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs370104884	chr5:95349035-95349036	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs534222872	chr5:95349041-95349042	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs547678859	chr5:95349063-95349064	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs538497210	chr5:95349155-95349156	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs567887362	chr5:95349203-95349204	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs187170088	chr5:95349218-95349219	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs556646034	chr5:95349225-95349226	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs372439413	chr5:95349237-95349238	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs576480511	chr5:95349265-95349266	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs539099435	chr5:95349513-95349514	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs551896242	chr5:95349545-95349546	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs572470048	chr5:95349581-95349582	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs115993658	chr5:95349604-95349605	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs372415591	chr5:95349625-95349626	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs138410287	chr5:95349644-95349645	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs574606167	chr5:95349650-95349651	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs543278070	chr5:95349673-95349674	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs563465723	chr5:95349708-95349709	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs192457569	chr5:95349774-95349775	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs548975153	chr5:95349784-95349785	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs149247079	chr5:95349790-95349791	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs200415041	chr5:95349849-95349850	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs182373274	chr5:95349881-95349882	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs116018547	chr5:95349917-95349918	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs116366378	chr5:95349925-95349926	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs186089531	chr5:95349928-95349929	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:81)

Disease	PMID	Source
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Metanephric adenoma	20802469	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Medulloblastoma	21979893	CNVD
Phyllodes tumor	17334353	CNVD
Malaria	21533027	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	20164919	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Cancer	16751803	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	17603634	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Melanoma	18172304	CNVD
Glioma	20126413	CNVD
Breast cancer	17393978	CNVD
Cancer	21359685	CNVD
Non-small cell lung cancer	21829676	CNVD
adenomatous polyposis	22470819	CNVD
Cancer	22429812	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Liposarcoma	21253554	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Breast cancer	21858162	CNVD
Leukemia	17361228	CNVD
Myelodysplastic syndrome	18508791	CNVD
5q-syndrome	17576883	CNVD
Gastric cancer	17908304	CNVD
Lung cancer	16740712	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Urothelial carcinoma	21177765	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Barrett''s syndrome	19417022	CNVD
Lung cancer	18438408	CNVD
Retinoblastoma	22278416	CNVD
Bipolar disorder	18458673	CNVD
Thyroid cancer	19087340	CNVD
Breast cancer	21785460	CNVD
Merkel cell carcinoma	19020549	CNVD
Squamous cell cancer	20885788	CNVD
Hepatocellular carcinoma	16750200	CNVD
Neurodevelopmental disorder	22521361	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	17133270	CNVD
Acute myeloid leukemia	20729466	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Acute myeloid leukemia	21251322	CNVD
lymphocytic leukemia	21291569	CNVD
Testicular cancer	18059402	CNVD
Colorectal cancer	16272173	CNVD
Prostate cancer	16573809	CNVD
Basal cell lymphoma	17053054	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Mental retardation	19471318	CNVD
Renal cell carcinoma	18194544	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Cancer	20164920	CNVD
Myelodysplastic syndrome	21251322	CNVD
abnormal development	18461090	CNVD
Myelofibrosis	22110671	CNVD
Colorectal cancer	16774939	CNVD
Williams Syndrome	20824207	CNVD
small cell lung cancer	20016488	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:1022 , 50 per page) page: 1 2 3 4 5 6 7 ... 21

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:95333400-95351600	Weak transcription	Stomach Mucosa	stomach
2	chr5:95333600-95360800	Weak transcription	Pancreas	Pancrea
3	chr5:95342800-95347800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr5:95343000-95348000	Weak transcription	NHEK	skin
5	chr5:95343000-95348200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr5:95344800-95348400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr5:95347800-95349000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
8	chr5:95348000-95348800	Enhancers	NHEK	skin
9	chr5:95348000-95352400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
10	chr5:95348200-95348800	Enhancers	Breast Myoepithelial Primary Cells	Breast
11	chr5:95348200-95348800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
12	chr5:95348200-95348800	Enhancers	HMEC	breast
13	chr5:95348400-95348800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
14	chr5:95348800-95350400	Weak transcription	HMEC	breast
15	chr5:95348800-95350400	Weak transcription	NHEK	skin
16	chr5:95348800-95353800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
17	chr5:95348800-95358800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
18	chr5:95349000-95350400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
19	chr5:95350000-95350600	Enhancers	A549	lung
20	chr5:95350200-95350600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
21	chr5:95350400-95350800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
22	chr5:95350400-95350800	Enhancers	HMEC	breast
23	chr5:95350400-95350800	Enhancers	NHEK	skin
24	chr5:95350600-95350800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
25	chr5:95350600-95353800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
26	chr5:95350600-95353800	Weak transcription	A549	lung
27	chr5:95350800-95351600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
28	chr5:95351200-95352000	Enhancers	Fetal Intestine Small	intestine
29	chr5:95351200-95352200	Enhancers	Fetal Intestine Large	intestine
30	chr5:95351600-95352200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
31	chr5:95351600-95352200	Enhancers	NHLF	lung
32	chr5:95351600-95352400	Enhancers	Stomach Mucosa	stomach
33	chr5:95351600-95353000	Enhancers	HepG2	liver
34	chr5:95351600-95354600	Enhancers	Hela-S3	cervix
35	chr5:95351800-95352600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
36	chr5:95351800-95354000	Enhancers	K562	blood
37	chr5:95352200-95353200	Weak transcription	NHLF	lung
38	chr5:95352200-95354200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
39	chr5:95352400-95354000	Weak transcription	Stomach Mucosa	stomach
40	chr5:95352600-95353000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
41	chr5:95353000-95353200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
42	chr5:95353000-95353800	Weak transcription	HepG2	liver
43	chr5:95353200-95353400	Enhancers	NHLF	lung
44	chr5:95353200-95357800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
45	chr5:95353400-95353800	Weak transcription	NHLF	lung
46	chr5:95353600-95354200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
47	chr5:95353600-95354200	Enhancers	NH-A	brain
48	chr5:95353600-95354400	Enhancers	Muscle Satellite Cultured Cells	--
49	chr5:95353600-95354800	Enhancers	NHDF-Ad	bronchial
50	chr5:95353600-95355400	Enhancers	Pancreatic Islets	Pancreatic Islet

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links