Variant report

Variant	nsv522811
Chromosome Location	chr19:40004640-40008220
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:159)
CpG islands
(count:977)
Chromatin interactive
region (count:10)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:159 , 50 per page) page: 1 2 3 4

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF2	chr19:40005751-40006206	H1-hESC	embryonic stem cell:	n/a	n/a
2	ATF2	chr19:40005761-40006172	H1-hESC	embryonic stem cell:	n/a	n/a
3	BACH1	chr19:40006485-40006494	H1-hESC	embryonic stem cell:	n/a	n/a
4	BACH1	chr19:40005623-40006251	H1-hESC	embryonic stem cell:	n/a	n/a
5	BCL3	chr19:40005105-40006369	A549	lung:	n/a	n/a
6	BRCA1	chr19:40006034-40006036	HepG2	liver:	n/a	n/a
7	CHD2	chr19:40005678-40006212	H1-hESC	embryonic stem cell:	n/a	n/a
8	CREB1	chr19:40005353-40006395	H1-hESC	embryonic stem cell:	n/a	n/a
9	CREB1	chr19:40006160-40006783	A549	lung:	n/a	n/a
10	CREB1	chr19:40005477-40006309	H1-hESC	embryonic stem cell:	n/a	n/a
11	CTBP2	chr19:40005508-40006510	H1-hESC	embryonic stem cell:	n/a	n/a
12	CTCF	chr19:40005660-40005810	AG04449	skin:	n/a	n/a
13	CTCF	chr19:40005620-40005770	SK-N-SH_RA	brain:	n/a	n/a
14	CTCF	chr19:40005712-40005769	GM12878	blood:	n/a	n/a
15	CTCF	chr19:40005435-40005565	H1-hESC	embryonic stem cell:	n/a	n/a
16	CTCF	chr19:40005680-40005830	GM12875	blood:	n/a	n/a
17	CTCF	chr19:40005690-40005815	GM19238	blood:	n/a	n/a
18	CTCF	chr19:40005700-40005850	GM06990	blood:	n/a	n/a
19	CTCF	chr19:40005680-40005830	AG09319	gingival:	n/a	n/a
20	CTCF	chr19:40005520-40005901	K562	blood:	n/a	n/a
21	CTCF	chr19:40005700-40005850	HCM	heart:	n/a	n/a
22	CTCF	chr19:40005700-40005850	HepG2	liver:	n/a	n/a
23	CTCF	chr19:40005640-40005790	HMEC	breast:	n/a	n/a
24	CTCF	chr19:40005660-40005810	HEK293	kidney:	n/a	n/a
25	CTCF	chr19:40005420-40005570	GM12864	blood:	n/a	n/a
26	CTCF	chr19:40005682-40005687	GM19238	blood:	n/a	n/a
27	CTCF	chr19:40005480-40005630	GM12866	blood:	n/a	n/a
28	CTCF	chr19:40005620-40005770	HEK293	kidney:	n/a	n/a
29	CTCF	chr19:40005680-40005830	GM12864	blood:	n/a	n/a
30	CTCF	chr19:40005640-40005790	GM12869	blood:	n/a	n/a
31	CTCF	chr19:40005547-40005922	H1-hESC	embryonic stem cell:	n/a	n/a
32	CTCF	chr19:40005625-40005861	K562	blood:	n/a	n/a
33	CTCF	chr19:40005820-40005970	GM12870	blood:	n/a	n/a
34	CTCF	chr19:40005721-40005767	GM12892	blood:	n/a	n/a
35	CTCF	chr19:40005600-40005750	K562	blood:	n/a	n/a
36	CTCF	chr19:40005680-40005830	GM12878	blood:	n/a	n/a
37	CTCF	chr19:40005693-40005796	GM12878	blood:	n/a	n/a
38	CTCF	chr19:40005686-40005819	HepG2	liver:	n/a	n/a
39	CTCF	chr19:40005660-40005810	GM12871	blood:	n/a	n/a
40	CTCF	chr19:40005720-40005870	HA-sp	spinal cord:	n/a	n/a
41	CTCF	chr19:40005620-40005770	BE2_C	brain:	n/a	n/a
42	CTCF	chr19:40005500-40005650	A549	lung:	n/a	n/a
43	CTCF	chr19:40005800-40005950	HUVEC	blood vessel:	n/a	n/a
44	CTCF	chr19:40005680-40005830	HepG2	liver:	n/a	n/a
45	CTCF	chr19:40005540-40005690	HRE	kidney:	n/a	n/a
46	CTCF	chr19:40005708-40005806	K562	blood:	n/a	n/a
47	CTCF	chr19:40005680-40005830	GM12868	blood:	n/a	n/a
48	CTCF	chr19:40005720-40005870	GM12866	blood:	n/a	n/a
49	CTCF	chr19:40005700-40005850	A549	lung:	n/a	n/a
50	CTCF	chr19:40005660-40005810	BJ	skin:	n/a	n/a

(count:977 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:40005758-40005808	PFSK-1	brain:	n/a
2	chr19:40005758-40005808	PFSK-1	brain:	n/a
3	chr19:40007922-40007972	HRE	kidney:	n/a
4	chr19:40004995-40005045	Hepatocyte	liver:	n/a
5	chr19:40005727-40005777	HAEpiC	amniotic membrane:	n/a
6	chr19:40007922-40007972	PANC-1	pancreas:	n/a
7	chr19:40006451-40006501	Hepatocyte	liver:	n/a
8	chr19:40005611-40005661	NT2-D1	testis:	n/a
9	chr19:40005602-40005652	K562	blood:	n/a
10	chr19:40005652-40005702	T-47D	breast:	n/a
11	chr19:40006451-40006501	ECC-1	luminal epithelium:	n/a
12	chr19:40005812-40005862	PANC-1	pancreas:	n/a
13	chr19:40006625-40006675	AG09309	skin:	n/a
14	chr19:40007922-40007972	ovcar-3	ovarian:	n/a
15	chr19:40005758-40005808	HCPEpiC	choroid plexus:	n/a
16	chr19:40005667-40005717	HNPCEpiC	eye:	n/a
17	chr19:40005649-40005699	BJ	skin:	n/a
18	chr19:40005557-40005607	BE2_C	brain:	n/a
19	chr19:40005836-40005886	HMEC	breast:	n/a
20	chr19:40005557-40005607	SK-N-SH_RA	brain:	n/a
21	chr19:40006625-40006675	GM12892	blood:	n/a
22	chr19:40006192-40006242	GM12891	blood:	n/a
23	chr19:40005602-40005652	HIPEpiC	eye:	n/a
24	chr19:40005727-40005777	HCF	heart:	n/a
25	chr19:40005758-40005808	NH-A	brain:	n/a
26	chr19:40005557-40005607	HCT-116	colon:	n/a
27	chr19:40005667-40005717	SAEC	small airway:	n/a
28	chr19:40005667-40005717	HMEC	breast:	n/a
29	chr19:40004995-40005045	HCM	heart:	n/a
30	chr19:40006625-40006675	AG04450	lung:	fetal
31	chr19:40005649-40005699	GM19239	blood:	n/a
32	chr19:40005652-40005702	HRE	kidney:	n/a
33	chr19:40005649-40005699	HCT-116	colon:	n/a
34	chr19:40006292-40006342	HNPCEpiC	eye:	n/a
35	chr19:40005836-40005886	AG10803	skin:	n/a
36	chr19:40005727-40005777	HRPEpiC	eye:	n/a
37	chr19:40006192-40006242	NHDF-neo	bronchial:	n/a
38	chr19:40005649-40005699	HRPEpiC	eye:	n/a
39	chr19:40005727-40005777	AG04450	lung:	fetal
40	chr19:40005727-40005777	H1-hESC	embryonic stem cell:	embryo
41	chr19:40006451-40006501	IMR90	lung:	fetal
42	chr19:40006451-40006501	SK-N-MC	brain:	n/a
43	chr19:40005758-40005808	K562	blood:	n/a
44	chr19:40006192-40006242	NB4	blood:	n/a
45	chr19:40005667-40005717	Jurkat	blood:	n/a
46	chr19:40005812-40005862	AoSMC	blood vessel:	n/a
47	chr19:40006292-40006342	ECC-1	luminal epithelium:	n/a
48	chr19:40005758-40005808	HRE	kidney:	n/a
49	chr19:40005758-40005808	SK-N-SH	brain:	n/a
50	chr19:40004995-40005045	K562	blood:	n/a

(count:10 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr19:40003141..40005134-chr19:40005498..40007914,2	K562	blood:
2	chr19:39970685..39973008-chr19:40008116..40011031,2	MCF-7	breast:
3	chr19:40008044..40009620-chr19:40022732..40025269,2	MCF-7	breast:
4	chr19:39987217..39989716-chr19:40005337..40006880,2	MCF-7	breast:
5	chr19:39996434..39999971-chr19:40007133..40012367,8	K562	blood:
6	chr19:40007684..40010217-chr19:40028799..40031419,2	K562	blood:
7	chr19:39935872..39937858-chr19:40003816..40005942,2	MCF-7	breast:
8	chr19:39898397..39900372-chr19:40006194..40008008,2	K562	blood:
9	chr19:39926370..39927938-chr19:40004340..40006529,2	K562	blood:
10	chr19:39995671..39997734-chr19:40002270..40005022,2	K562	blood:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-DLL3-1	chr19:40006086-40006661	NONHSAT066307

No data

Variant related genes	Relation type
ENSG00000186838	TF binding region
ENSG00000186838	CpG island
ENSG00000105197	chromatin interactions
ENSG00000266559	chromatin interactions
ENSG00000196235	chromatin interactions
ENSG00000090932	chromatin interactions
ENSG00000186838	chromatin interactions
ENSG00000269792	chromatin interactions
ENSG00000176401	chromatin interactions
ENSG00000176396	chromatin interactions
ENSG00000105193	chromatin interactions
ENSG00000269584	chromatin interactions

Extended variants
information (count: 145 )
Associated
traits (count: 64 )

Variant overlapped rSNPs/rCNVs (count:145 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs4803254	chr19:40004640-40004641	Weak transcription Bivalent Enhancer Bivalent/Poised TSS	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs536614351	chr19:40004683-40004684	Weak transcription Bivalent Enhancer Bivalent/Poised TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
3	rs564252584	chr19:40004688-40004689	Weak transcription Bivalent Enhancer Bivalent/Poised TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
4	rs536541321	chr19:40004714-40004715	Weak transcription Bivalent Enhancer Bivalent/Poised TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
5	rs377715543	chr19:40004720-40004721	Weak transcription Bivalent Enhancer Bivalent/Poised TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
6	rs76544036	chr19:40004909-40004910	Weak transcription Bivalent Enhancer Bivalent/Poised TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
7	rs78659295	chr19:40004918-40004919	Weak transcription Bivalent Enhancer Bivalent/Poised TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
8	rs556300916	chr19:40004939-40004940	Weak transcription Bivalent Enhancer Bivalent/Poised TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
9	rs578026402	chr19:40005029-40005030	Weak transcription Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
10	rs112129597	chr19:40005058-40005059	Weak transcription Bivalent Enhancer Bivalent/Poised TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
11	rs149885350	chr19:40005078-40005079	Weak transcription Bivalent Enhancer Bivalent/Poised TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
12	rs572349140	chr19:40005174-40005175	Weak transcription Bivalent Enhancer Bivalent/Poised TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
13	rs11667024	chr19:40005228-40005229	Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Enhancers Bivalent Enhancer Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
14	rs542889072	chr19:40005292-40005293	Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Enhancers Bivalent Enhancer Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
15	rs375527988	chr19:40005303-40005304	Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Enhancers Bivalent Enhancer Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
16	rs534794766	chr19:40005325-40005326	Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Enhancers Bivalent Enhancer Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
17	rs554402387	chr19:40005352-40005353	Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Enhancers Bivalent Enhancer Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
18	rs576677905	chr19:40005394-40005395	Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Enhancers Bivalent Enhancer Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
19	rs543377893	chr19:40005406-40005407	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Bivalent Enhancer Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
20	rs564728705	chr19:40005442-40005443	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Bivalent Enhancer Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
21	rs532193453	chr19:40005465-40005466	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Bivalent Enhancer Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
22	rs10410648	chr19:40005516-40005517	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Bivalent Enhancer Enhancers	TF binding region Chromatin interactive region	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
23	rs559585403	chr19:40005517-40005518	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Bivalent Enhancer Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
24	rs529943876	chr19:40005532-40005533	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Bivalent Enhancer Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
25	rs77098486	chr19:40005539-40005540	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Bivalent Enhancer Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
26	rs569900683	chr19:40005603-40005604	Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
27	rs140724420	chr19:40005611-40005612	Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
28	rs115973004	chr19:40005615-40005616	Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
29	rs35235108	chr19:40005630-40005631	Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
30	rs77393823	chr19:40005635-40005636	Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
31	rs571589792	chr19:40005659-40005660	Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
32	rs538741844	chr19:40005679-40005680	Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
33	rs553874104	chr19:40005695-40005696	Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
34	rs548145137	chr19:40005709-40005710	Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
35	rs372238324	chr19:40005712-40005713	Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
36	rs565919445	chr19:40005736-40005737	Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
37	rs536413308	chr19:40005837-40005838	Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
38	rs554886244	chr19:40005855-40005856	Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
39	rs576629288	chr19:40005856-40005857	Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
40	rs543769850	chr19:40005866-40005867	Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
41	rs76140888	chr19:40005903-40005904	Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
42	rs376284154	chr19:40005935-40005936	Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
43	rs187415319	chr19:40005936-40005937	Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
44	rs541106632	chr19:40005942-40005943	Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
45	rs375911338	chr19:40005960-40005961	Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
46	rs372527012	chr19:40005981-40005982	Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
47	rs566071020	chr19:40006064-40006065	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
48	rs375570045	chr19:40006084-40006085	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
49	rs77624079	chr19:40006090-40006091	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS Enhancers	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
50	rs191574540	chr19:40006156-40006157	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS Enhancers	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:64)

Disease	PMID	Source
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Autism	22495311	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Ductal carcinoma	22052326	CNVD
Pleomorphic liposarcoma	18784837	CNVD
Congenital nephrotic syndrome	18421352	CNVD
Astrocytoma	17934521	CNVD
Leukemia	17361228	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Breast cancer	21858162	CNVD
Breast cancer	17603634	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Oligodendroglial tumors	17285580	CNVD
renal disease	20603712	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Disorders of sex development	21048976	CNVD
Ovarian cancer	22174824	CNVD
Breast cancer	16608533	CNVD
Neuroblastoma	18923191	CNVD
Breast cancer	21364760	CNVD
Invasive pancreatic ductal carcinoma	18765526	CNVD
Rhabdomyosarcoma	16790082	CNVD
Chordoma	18071362	CNVD
Urothelial carcinoma	21177765	CNVD
small cell lung cancer	20016488	CNVD
Wilms tumour	21544195	CNVD
Mental retardation	19951919	CNVD
19q13.11 deletion syndrome	22378287	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	21045282	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Ovarian neoplasms	16753589	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Metanephric adenoma	20802469	CNVD
Acute myeloid leukemia	16864856	CNVD
Lung cancer	21569311	CNVD
Bladder cancer	21909424	CNVD
Medulloblastoma	16783165	CNVD
Gastric cancer	18160780	CNVD
Hepatocellular carcinoma	16750200	CNVD
Basal cell lymphoma	19029149	CNVD
Breast cancer	20409316	CNVD
Diffuse large b-cell lymphoma	19029149	CNVD
Multiple myeloma	16616336	CNVD
Renal cell carcinoma	18765545	CNVD
Acute myeloid leukemia	20729466	CNVD
Lung cancer	18438408	CNVD

Chromatin state (count:336 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:39998400-40005400	Weak transcription	Right Atrium	heart
2	chr19:39999400-40005200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr19:40004400-40005200	Bivalent Enhancer	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr19:40004600-40005400	Bivalent/Poised TSS	Stomach Smooth Muscle	stomach
5	chr19:40004800-40005400	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin02	Skin
6	chr19:40005200-40005400	Bivalent/Poised TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr19:40005200-40005400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr19:40005200-40005400	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
9	chr19:40005200-40005400	Bivalent Enhancer	Primary T helper naive cells fromperipheralblood	blood
10	chr19:40005200-40005400	Bivalent Enhancer	Cortex derived primary cultured neurospheres	brain
11	chr19:40005200-40005400	Bivalent Enhancer	Ganglion Eminence derived primary cultured neurospheres	brain
12	chr19:40005200-40005400	Bivalent/Poised TSS	Duodenum Mucosa	Duodenum
13	chr19:40005200-40005600	Flanking Bivalent TSS/Enh	H1 Cell Line	embryonic stem cell
14	chr19:40005200-40005600	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
15	chr19:40005200-40005600	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
16	chr19:40005200-40005600	Flanking Bivalent TSS/Enh	iPS DF 19.11 Cell Line	embryonic stem cell
17	chr19:40005200-40005600	Bivalent Enhancer	Primary B cells from peripheral blood	blood
18	chr19:40005200-40005600	Bivalent Enhancer	Primary T killer naive cells fromperipheralblood	blood
19	chr19:40005200-40005600	Bivalent/Poised TSS	Brain Cingulate Gyrus	brain
20	chr19:40005200-40005600	Bivalent Enhancer	Brain Hippocampus Middle	brain
21	chr19:40005200-40005600	Bivalent Enhancer	Fetal Brain Female	brain
22	chr19:40005200-40005600	Bivalent Enhancer	Fetal Stomach	stomach
23	chr19:40005200-40005800	Bivalent Enhancer	Primary T helper 17 cells PMA-I stimulated	--
24	chr19:40005200-40006000	Bivalent Enhancer	Primary T helper naive cells from peripheral blood	blood
25	chr19:40005200-40006600	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
26	chr19:40005200-40007200	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
27	chr19:40005200-40007400	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
28	chr19:40005200-40007800	Active TSS	H9 Cell Line	embryonic stem cell
29	chr19:40005400-40005600	Bivalent/Poised TSS	ES-WA7 Cell Line	embryonic stem cell
30	chr19:40005400-40005600	Flanking Bivalent TSS/Enh	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
31	chr19:40005400-40005600	Flanking Bivalent TSS/Enh	H1 Derived Mesenchymal Stem Cells	ES cell derived
32	chr19:40005400-40005600	Flanking Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
33	chr19:40005400-40005600	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
34	chr19:40005400-40005600	Flanking Bivalent TSS/Enh	iPS DF 6.9 Cell Line	embryonic stem cell
35	chr19:40005400-40005600	Flanking Bivalent TSS/Enh	ES-UCSF4 Cell Line	embryonic stem cell
36	chr19:40005400-40005600	Flanking Bivalent TSS/Enh	Primary T cells from cord blood	blood
37	chr19:40005400-40005600	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
38	chr19:40005400-40005600	Bivalent Enhancer	Primary hematopoietic stem cells	blood
39	chr19:40005400-40005600	Flanking Bivalent TSS/Enh	Primary T helper naive cells fromperipheralblood	blood
40	chr19:40005400-40005600	Bivalent Enhancer	Primary T cells effector/memory enriched fromperipheralblood	blood
41	chr19:40005400-40005600	Bivalent Enhancer	Foreskin Melanocyte Primary Cells skin01	Skin
42	chr19:40005400-40005600	Bivalent Enhancer	Primary mononuclear cells fromperipheralblood	Blood
43	chr19:40005400-40005600	Bivalent Enhancer	Adipose Nuclei	Adipose
44	chr19:40005400-40005600	Flanking Bivalent TSS/Enh	Brain Angular Gyrus	brain
45	chr19:40005400-40005600	Bivalent/Poised TSS	Brain Germinal Matrix	brain
46	chr19:40005400-40005600	Flanking Bivalent TSS/Enh	Brain Substantia Nigra	brain
47	chr19:40005400-40005600	Bivalent Enhancer	Colonic Mucosa	Colon
48	chr19:40005400-40005600	Flanking Bivalent TSS/Enh	Colon Smooth Muscle	Colon
49	chr19:40005400-40005600	Bivalent Enhancer	Duodenum Mucosa	Duodenum
50	chr19:40005400-40005600	Bivalent Enhancer	Fetal Intestine Small	intestine

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