No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs2241416 |
chr16:77227180-77227181 |
Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
2 |
rs533777476 |
chr16:77227205-77227206 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs371785584 |
chr16:77227227-77227228 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs184634351 |
chr16:77227236-77227237 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs545762004 |
chr16:77227237-77227238 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs575188052 |
chr16:77227238-77227239 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs190216554 |
chr16:77227255-77227256 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs575728512 |
chr16:77227272-77227273 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs2232501 |
chr16:77227285-77227286 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs372964160 |
chr16:77227319-77227320 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs377031249 |
chr16:77227324-77227325 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs369737968 |
chr16:77227336-77227337 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs149878306 |
chr16:77227367-77227368 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs147314303 |
chr16:77227377-77227378 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs530205892 |
chr16:77227383-77227384 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs141036426 |
chr16:77227386-77227387 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs374424902 |
chr16:77227387-77227388 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs201491452 |
chr16:77227388-77227389 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs560508471 |
chr16:77227390-77227391 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs372990815 |
chr16:77227403-77227404 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs376216086 |
chr16:77227441-77227442 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs144793245 |
chr16:77227450-77227451 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs370682949 |
chr16:77227490-77227491 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs147924001 |
chr16:77227491-77227492 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs374071418 |
chr16:77227516-77227517 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs370504352 |
chr16:77227520-77227521 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs368320717 |
chr16:77227522-77227523 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs148989729 |
chr16:77227524-77227525 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs142865965 |
chr16:77227526-77227527 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs201179032 |
chr16:77227532-77227533 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs367902675 |
chr16:77227556-77227557 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs151075634 |
chr16:77227571-77227572 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs372101794 |
chr16:77227578-77227579 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs140910966 |
chr16:77227591-77227592 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs182287858 |
chr16:77227597-77227598 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs552618780 |
chr16:77227598-77227599 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs144997913 |
chr16:77227599-77227600 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs369675630 |
chr16:77227620-77227621 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs200826983 |
chr16:77227645-77227646 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs138097149 |
chr16:77227646-77227647 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs569161651 |
chr16:77227659-77227660 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs112037840 |
chr16:77227676-77227677 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs138584446 |
chr16:77227738-77227739 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs149390113 |
chr16:77227742-77227743 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs144709133 |
chr16:77227818-77227819 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs533629506 |
chr16:77227826-77227827 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs138226682 |
chr16:77227827-77227828 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs3743760 |
chr16:77227831-77227832 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
49 |
rs539590226 |
chr16:77227840-77227841 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs556186536 |
chr16:77227859-77227860 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|