Variant report

Variant	nsv523837
Chromosome Location	chr3:119278848-119288848
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:260)
CpG islands
(count:122)
Chromatin interactive
region (count:6)
LncRNA
region (count:4)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:260 , 50 per page) page: 1 2 3 4 5 6

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF2	chr3:119280942-119282102	GM12878	blood:	n/a	n/a
2	ATF2	chr3:119278971-119279515	GM12878	blood:	n/a	n/a
3	ATF2	chr3:119280968-119282032	GM12878	blood:	n/a	n/a
4	BATF	chr3:119281147-119281860	GM12878	blood:	n/a	n/a
5	BCL11A	chr3:119281169-119281949	GM12878	blood:	n/a	chr3:119281541-119281550
6	BCL3	chr3:119281070-119281975	GM12878	blood:	n/a	chr3:119281541-119281550
7	BCLAF1	chr3:119278013-119279568	GM12878	blood:	n/a	n/a
8	BCLAF1	chr3:119281036-119282001	GM12878	blood:	n/a	chr3:119281541-119281550
9	BCLAF1	chr3:119278964-119279757	GM12878	blood:	n/a	n/a
10	BCLAF1	chr3:119281009-119282016	GM12878	blood:	n/a	chr3:119281541-119281550
11	BCLAF1	chr3:119280064-119280558	GM12878	blood:	n/a	n/a
12	BCLAF1	chr3:119277506-119278857	GM12878	blood:	n/a	n/a
13	BHLHE40	chr3:119281175-119281980	GM12878	blood:	n/a	n/a
14	CEBPB	chr3:119277982-119279063	GM12878	blood:	n/a	n/a
15	CEBPB	chr3:119281151-119281373	K562	blood:	n/a	n/a
16	CEBPB	chr3:119281097-119281520	K562	blood:	n/a	n/a
17	CEBPB	chr3:119281124-119281436	IMR90	lung:	n/a	n/a
18	CEBPB	chr3:119281076-119281486	MCF-7	breast:	n/a	n/a
19	CEBPB	chr3:119281113-119281463	A549	lung:	n/a	n/a
20	CEBPB	chr3:119281180-119281384	HepG2	liver:	n/a	n/a
21	CEBPB	chr3:119281111-119281451	H1-hESC	embryonic stem cell:	n/a	n/a
22	CEBPB	chr3:119280982-119282130	GM12878	blood:	n/a	n/a
23	CEBPB	chr3:119281120-119281426	K562	blood:	n/a	n/a
24	CEBPB	chr3:119281174-119281473	A549	lung:	n/a	n/a
25	CEBPB	chr3:119281099-119281479	HepG2	liver:	n/a	n/a
26	CEBPB	chr3:119281128-119281433	Hela-S3	cervix:	n/a	n/a
27	CHD1	chr3:119277633-119279564	GM12878	blood:	n/a	n/a
28	CHD1	chr3:119280169-119280498	GM12878	blood:	n/a	n/a
29	CHD1	chr3:119280842-119281999	GM12878	blood:	n/a	n/a
30	CHD2	chr3:119281191-119281891	GM12878	blood:	n/a	n/a
31	CREB1	chr3:119281102-119281994	GM12878	blood:	n/a	n/a
32	CREB1	chr3:119281026-119282067	GM12878	blood:	n/a	n/a
33	CTCF	chr3:119278860-119279010	GM12875	blood:	n/a	chr3:119278958-119278967
34	CTCF	chr3:119278740-119278890	RPTEC	kidney:	n/a	n/a
35	CTCF	chr3:119279094-119279097	GM19239	blood:	n/a	n/a
36	CTCF	chr3:119279120-119279270	GM12872	blood:	n/a	n/a
37	CTCF	chr3:119278822-119279108	GM12892	blood:	n/a	chr3:119278958-119278967
38	CTCF	chr3:119279300-119279450	GM12872	blood:	n/a	n/a
39	CTCF	chr3:119278889-119279083	GM19239	blood:	n/a	chr3:119278958-119278967
40	CTCF	chr3:119278860-119279010	GM12867	blood:	n/a	chr3:119278958-119278967
41	CTCF	chr3:119278780-119278930	GM12874	blood:	n/a	n/a
42	CTCF	chr3:119278780-119278930	HPF	lung:	n/a	n/a
43	CTCF	chr3:119279000-119279150	A549	lung:	n/a	n/a
44	CTCF	chr3:119278840-119278990	GM12878	blood:	n/a	chr3:119278958-119278967
45	CTCF	chr3:119278011-119279041	GM12878	blood:	n/a	chr3:119278958-119278967 chr3:119278181-119278202 chr3:119278514-119278527 chr3:119278512-119278530 chr3:119278513-119278529
46	CTCF	chr3:119278920-119279070	GM12865	blood:	n/a	chr3:119278958-119278967
47	CTCF	chr3:119278920-119279070	GM12874	blood:	n/a	chr3:119278958-119278967
48	CTCF	chr3:119278700-119278850	HMF	breast:	n/a	n/a
49	CTCF	chr3:119277983-119278971	A549	lung:	n/a	chr3:119278958-119278967 chr3:119278181-119278202 chr3:119278514-119278527 chr3:119278512-119278530 chr3:119278513-119278529
50	CTCF	chr3:119278901-119279006	GM19240	blood:	n/a	chr3:119278958-119278967

(count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:119278956-119279006	ProgFib	skin:	n/a
2	chr3:119279147-119279197	HEK293	kidney:	embryo
3	chr3:119278956-119279006	HCM	heart:	n/a
4	chr3:119279147-119279197	SAEC	small airway:	n/a
5	chr3:119278956-119279006	GM19239	blood:	n/a
6	chr3:119278956-119279006	HL-60	blood:	n/a
7	chr3:119278956-119279006	K562	blood:	n/a
8	chr3:119279147-119279197	NH-A	brain:	n/a
9	chr3:119278956-119279006	GM12878	blood:	n/a
10	chr3:119278956-119279006	NH-A	brain:	n/a
11	chr3:119279147-119279197	BJ	skin:	n/a
12	chr3:119278956-119279006	HPAEpiC	pulmonary alveolar:	n/a
13	chr3:119278956-119279006	HRE	kidney:	n/a
14	chr3:119278956-119279006	HNPCEpiC	eye:	n/a
15	chr3:119279147-119279197	NT2-D1	testis:	n/a
16	chr3:119279147-119279197	SK-N-SH	brain:	n/a
17	chr3:119279147-119279197	PrEC	prostate:	n/a
18	chr3:119278956-119279006	AG10803	skin:	n/a
19	chr3:119278956-119279006	AG09309	skin:	n/a
20	chr3:119278956-119279006	HEEpiC	esophagus:	n/a
21	chr3:119279147-119279197	ProgFib	skin:	n/a
22	chr3:119278956-119279006	HCF	heart:	n/a
23	chr3:119278956-119279006	SK-N-MC	brain:	n/a
24	chr3:119279147-119279197	GM12878	blood:	n/a
25	chr3:119279147-119279197	AG09309	skin:	n/a
26	chr3:119278956-119279006	GM06990	blood:	n/a
27	chr3:119278956-119279006	HCPEpiC	choroid plexus:	n/a
28	chr3:119278956-119279006	SK-N-SH_RA	brain:	n/a
29	chr3:119278956-119279006	A549	lung:	n/a
30	chr3:119278956-119279006	HepG2	liver:	n/a
31	chr3:119279147-119279197	Caco-2	colon:	n/a
32	chr3:119279147-119279197	SK-N-MC	brain:	n/a
33	chr3:119279147-119279197	BE2_C	brain:	n/a
34	chr3:119278956-119279006	GM12891	blood:	n/a
35	chr3:119279147-119279197	AG09319	gingival:	n/a
36	chr3:119278956-119279006	AG04449	skin:	fetal
37	chr3:119279147-119279197	GM06990	blood:	n/a
38	chr3:119279147-119279197	HCPEpiC	choroid plexus:	n/a
39	chr3:119279147-119279197	K562	blood:	n/a
40	chr3:119278956-119279006	T-47D	breast:	n/a
41	chr3:119278956-119279006	U87	brain:	n/a
42	chr3:119278956-119279006	HIPEpiC	eye:	n/a
43	chr3:119278956-119279006	AoSMC	blood vessel:	n/a
44	chr3:119278956-119279006	H1-hESC	embryonic stem cell:	embryo
45	chr3:119278956-119279006	GM12892	blood:	n/a
46	chr3:119278956-119279006	HRCEpiC	kidney:	n/a
47	chr3:119279147-119279197	HRCEpiC	kidney:	n/a
48	chr3:119279147-119279197	PANC-1	pancreas:	n/a
49	chr3:119279147-119279197	HepG2	liver:	n/a
50	chr3:119278956-119279006	RPTEC	kidney:	n/a

(count:6 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr3:119276600..119278656-chr3:119281431..119284119,2	K562	blood:
2	chr3:119218133..119220642-chr3:119277892..119280066,2	K562	blood:
3	chr3:119273694..119275953-chr3:119287786..119289362,2	K562	blood:
4	chr3:119181171..119183307-chr3:119278520..119281290,2	MCF-7	breast:
5	chr3:119276600..119278562-chr3:119281431..119283336,2	K562	blood:
6	chr3:119287118..119288876-chr3:119295967..119300042,3	MCF-7	breast:

(count:4 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ADPRH-1	chr3:119279388-119279592	NONHSAT091393
2	lnc-ADPRH-1	chr3:119280374-119280416	NONHSAT091393
3	lnc-ADPRH-1	chr3:119279389-119279592	XLOC_002777
4	lnc-ADPRH-1	chr3:119280375-119280416	XLOC_002777

No data

Variant related genes	Relation type
CD80	TF binding region
CD80	CpG island
ENSG00000113845	chromatin interactions
ENSG00000144843	chromatin interactions
ENSG00000176142	chromatin interactions
ENSG00000272967	chromatin interactions
ENSG00000121594	chromatin interactions

Extended variants
information (count: 443 )
Associated
traits (count: 58 )

Variant overlapped rSNPs/rCNVs (count:443 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs1880661	chr3:119278848-119278849	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs142836367	chr3:119278860-119278861	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
3	rs369616613	chr3:119278876-119278877	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
4	rs68180496	chr3:119278915-119278916	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
5	rs563338806	chr3:119278956-119278957	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
6	rs530693373	chr3:119278964-119278965	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
7	rs548898150	chr3:119278968-119278969	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
8	rs75323719	chr3:119279000-119279001	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
9	rs367802277	chr3:119279014-119279015	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
10	rs370274015	chr3:119279015-119279016	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
11	rs373186528	chr3:119279016-119279017	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
12	rs139023057	chr3:119279017-119279018	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
13	rs200763538	chr3:119279018-119279019	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
14	rs34055301	chr3:119279024-119279025	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
15	rs528174907	chr3:119279076-119279077	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
16	rs546652553	chr3:119279094-119279095	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
17	rs571229539	chr3:119279109-119279110	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
18	rs539766933	chr3:119279134-119279135	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
19	rs34394661	chr3:119279148-119279149	Weak transcription Enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
20	rs570242842	chr3:119279157-119279158	Weak transcription Enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
21	rs537696536	chr3:119279187-119279188	Weak transcription Enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
22	rs376136941	chr3:119279199-119279200	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
23	rs151035811	chr3:119279220-119279221	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
24	rs573828313	chr3:119279221-119279222	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
25	rs147000986	chr3:119279225-119279226	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
26	rs1852212	chr3:119279235-119279236	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
27	rs189540355	chr3:119279240-119279241	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
28	rs181999771	chr3:119279265-119279266	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
29	rs563643165	chr3:119279275-119279276	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
30	rs3915166	chr3:119279281-119279282	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
31	rs542874199	chr3:119279314-119279315	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
32	rs186388916	chr3:119279324-119279325	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
33	rs147620593	chr3:119279330-119279331	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
34	rs3915165	chr3:119279351-119279352	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
35	rs564879063	chr3:119279438-119279439	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
36	rs142119185	chr3:119279495-119279496	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
37	rs66797637	chr3:119279658-119279659	Weak transcription Enhancers Active TSS	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
38	rs570354755	chr3:119279664-119279665	Weak transcription Enhancers Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
39	rs565916400	chr3:119279700-119279701	Weak transcription Enhancers Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
40	rs537329086	chr3:119279713-119279714	Weak transcription Enhancers Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
41	rs145879339	chr3:119279770-119279771	Weak transcription Enhancers Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
42	rs200486436	chr3:119279789-119279790	Weak transcription Enhancers Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
43	rs34601387	chr3:119279801-119279802	Weak transcription Enhancers Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
44	rs72953001	chr3:119279809-119279810	Weak transcription Enhancers Active TSS	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
45	rs112746804	chr3:119279821-119279822	Weak transcription Enhancers Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	mRNA abundance
46	rs553006924	chr3:119279822-119279823	Weak transcription Enhancers Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
47	rs578029048	chr3:119279868-119279869	Weak transcription Enhancers Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
48	rs149269929	chr3:119279927-119279928	Weak transcription Enhancers Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
49	rs112384456	chr3:119279928-119279929	Weak transcription Enhancers Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	mRNA abundance
50	rs111793222	chr3:119279939-119279940	Weak transcription Enhancers Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	mRNA abundance

Variant related diseases (count:58)

Disease	PMID	Source
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Cancer	21183584	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Bipolar disorder	20877625	CNVD
Bipolar disorder	21956041	CNVD
Bipolar disorder	22241247	CNVD
Biliary cancer	18923514	CNVD
Prostate cancer	21965145	CNVD
Cancer	21129771	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Cervical cancer	21062161	CNVD
Squamous cell cancer	20885788	CNVD
Melanoma	18172304	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Bipolar disorder	18458673	CNVD
Breast cancer	22032731	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Breast cancer	16461572	CNVD
Neuroblastoma	17533364	CNVD
microdeletion syndrome	22180640	CNVD
Cervical Cancer	21857958	CNVD
Melanoma	21693616	CNVD
Lung cancer	21426551	CNVD
Cancer	21637783	CNVD
Cervical cancer	21063398	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oral cancer	21386901	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	22065749	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	16608533	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Developmental delay	22180640	CNVD
Multiple myeloma	17550852	CNVD
Basal cell lymphoma	21115979	CNVD
Ovarian cancer	22174824	CNVD
lymphocytic leukemia	21291569	CNVD
small cell lung cancer	20016488	CNVD
Cancer	20164920	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Glioblastoma multiforme	22286061	CNVD
Neurodevelopmental disorder	22521361	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD

Chromatin state (count:83 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:119267600-119298000	Weak transcription	Fetal Lung	lung
2	chr3:119271400-119281400	Weak transcription	Right Ventricle	heart
3	chr3:119275000-119281200	Weak transcription	Right Atrium	heart
4	chr3:119275000-119281200	Weak transcription	Spleen	Spleen
5	chr3:119276600-119279200	Enhancers	Primary monocytes fromperipheralblood	blood
6	chr3:119277000-119281200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
7	chr3:119277800-119279200	Enhancers	Primary hematopoietic stem cells short term culture	blood
8	chr3:119278200-119279000	Enhancers	Primary T helper cells PMA-I stimulated	--
9	chr3:119278200-119279000	Enhancers	Primary T helper cells fromperipheralblood	blood
10	chr3:119278200-119279000	Active TSS	Hela-S3	cervix
11	chr3:119278400-119279000	Enhancers	Primary T cells fromperipheralblood	blood
12	chr3:119278400-119279000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
13	chr3:119278400-119279000	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
14	chr3:119278400-119279000	Enhancers	Monocytes-CD14+_RO01746	blood
15	chr3:119278400-119279400	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
16	chr3:119278400-119282200	Enhancers	Primary B cells from peripheral blood	blood
17	chr3:119278600-119279000	Enhancers	H1 Cell Line	embryonic stem cell
18	chr3:119278600-119279000	Enhancers	Fetal Thymus	thymus
19	chr3:119278600-119279000	Enhancers	Skeletal Muscle Male	skeletal muscle
20	chr3:119278600-119279200	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
21	chr3:119278600-119279600	Flanking Active TSS	GM12878-XiMat	blood
22	chr3:119278800-119279000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
23	chr3:119278800-119279000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
24	chr3:119278800-119279200	Enhancers	Primary T regulatory cells fromperipheralblood	blood
25	chr3:119278800-119281200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
26	chr3:119278800-119281200	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
27	chr3:119278800-119281200	Weak transcription	Pancreas	Pancrea
28	chr3:119278800-119281400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
29	chr3:119279000-119280400	Weak transcription	Monocytes-CD14+_RO01746	blood
30	chr3:119279000-119281200	Weak transcription	Primary T cells fromperipheralblood	blood
31	chr3:119279000-119281200	Weak transcription	Primary T helper cells fromperipheralblood	blood
32	chr3:119279000-119281200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
33	chr3:119279000-119281200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
34	chr3:119279000-119281200	Weak transcription	Rectal Mucosa Donor 31	rectum
35	chr3:119279000-119281200	Weak transcription	Skeletal Muscle Male	skeletal muscle
36	chr3:119279000-119281400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
37	chr3:119279000-119281400	Weak transcription	Fetal Thymus	thymus
38	chr3:119279200-119280400	Weak transcription	Primary monocytes fromperipheralblood	blood
39	chr3:119279200-119281200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
40	chr3:119279200-119281200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
41	chr3:119279200-119287400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
42	chr3:119279400-119280400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
43	chr3:119279600-119281200	Active TSS	GM12878-XiMat	blood
44	chr3:119280400-119281200	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
45	chr3:119280400-119281800	Enhancers	Monocytes-CD14+_RO01746	blood
46	chr3:119280400-119282000	Enhancers	Primary monocytes fromperipheralblood	blood
47	chr3:119281200-119281600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
48	chr3:119281200-119281600	Enhancers	Primary hematopoietic stem cells short term culture	blood
49	chr3:119281200-119281600	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
50	chr3:119281200-119281600	Enhancers	Primary T helper cells fromperipheralblood	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links