Variant report

Variant nsv525033
Chromosome Location chr20:25688001-25730968
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:226 , 50 per page) page: 1 2 3 4 5
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:25677800-25701000 Weak transcription Pancreas Pancrea
2 chr20:25686600-25688800 Enhancers Primary T helper cells fromperipheralblood blood
3 chr20:25686800-25688400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
4 chr20:25687000-25688400 Enhancers Primary T killer naive cells fromperipheralblood blood
5 chr20:25687000-25688600 Enhancers Primary T regulatory cells fromperipheralblood blood
6 chr20:25687000-25688800 Enhancers Primary T killer memory cells from peripheral blood blood
7 chr20:25687000-25689000 Enhancers Primary T helper cells PMA-I stimulated --
8 chr20:25687400-25688200 Enhancers Primary T cells from cord blood blood
9 chr20:25687400-25689000 Enhancers GM12878-XiMat blood
10 chr20:25687600-25688600 Enhancers Primary T helper naive cells fromperipheralblood blood
11 chr20:25687800-25688800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
12 chr20:25687800-25695800 Weak transcription Gastric stomach
13 chr20:25689200-25689400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr20:25690400-25692600 Weak transcription Primary T cells from cord blood blood
15 chr20:25692600-25693000 ZNF genes & repeats Primary T cells from cord blood blood
16 chr20:25693000-25693800 Weak transcription Primary T cells from cord blood blood
17 chr20:25693800-25694000 ZNF genes & repeats Primary T cells from cord blood blood
18 chr20:25693800-25694200 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
19 chr20:25693800-25694400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr20:25694000-25700200 Weak transcription Primary T cells from cord blood blood
21 chr20:25694200-25705400 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr20:25697800-25700000 Weak transcription Gastric stomach
23 chr20:25698600-25700600 Weak transcription Ovary ovary
24 chr20:25699200-25700800 Enhancers Primary T killer memory cells from peripheral blood blood
25 chr20:25699200-25701200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
26 chr20:25699200-25701200 Enhancers Primary T helper naive cells from peripheral blood blood
27 chr20:25699200-25701200 Enhancers Primary T helper cells PMA-I stimulated --
28 chr20:25699200-25701400 Enhancers Primary T cells fromperipheralblood blood
29 chr20:25699200-25701400 Enhancers Primary T helper cells fromperipheralblood blood
30 chr20:25699200-25701400 Weak transcription Brain Hippocampus Middle brain
31 chr20:25699400-25700000 Enhancers Dnd41 blood
32 chr20:25699400-25700800 Enhancers ES-I3 Cell Line embryonic stem cell
33 chr20:25699400-25702600 Weak transcription Brain Cingulate Gyrus brain
34 chr20:25699600-25700000 Active TSS Primary T helper naive cells fromperipheralblood blood
35 chr20:25699600-25700400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr20:25699600-25700400 Enhancers Primary mononuclear cells fromperipheralblood Blood
37 chr20:25699600-25700800 Enhancers Primary Natural Killer cells fromperipheralblood blood
38 chr20:25699600-25701400 Enhancers Fetal Thymus thymus
39 chr20:25699800-25700000 Enhancers Primary T helper 17 cells PMA-I stimulated --
40 chr20:25699800-25707400 Weak transcription Psoas Muscle Psoas
41 chr20:25700000-25700200 Active TSS HUES6 Cell Line embryonic stem cell
42 chr20:25700000-25700200 Active TSS iPS-15b Cell Line embryonic stem cell
43 chr20:25700000-25700200 Active TSS HepG2 liver
44 chr20:25700000-25700400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
45 chr20:25700000-25700400 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
46 chr20:25700000-25700400 Enhancers Rectal Mucosa Donor 29 rectum
47 chr20:25700000-25700600 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
48 chr20:25700000-25700600 Flanking Active TSS Dnd41 blood
49 chr20:25700000-25700600 Enhancers NHEK skin
50 chr20:25700000-25701200 Enhancers Gastric stomach

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