No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs7899538 |
chr10:6059898-6059899 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
2 |
rs571942858 |
chr10:6059943-6059944 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
3 |
rs112185090 |
chr10:6059944-6059945 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
4 |
rs554056243 |
chr10:6059946-6059947 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
5 |
rs572628967 |
chr10:6059965-6059966 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
6 |
rs12722699 |
chr10:6060015-6060016 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
7 |
rs536344946 |
chr10:6060022-6060023 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
8 |
rs140088691 |
chr10:6060023-6060024 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
9 |
rs554680869 |
chr10:6060033-6060034 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
10 |
rs143550766 |
chr10:6060053-6060054 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
11 |
rs113428577 |
chr10:6060054-6060055 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
12 |
rs12722698 |
chr10:6060057-6060058 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
13 |
rs74162100 |
chr10:6060081-6060082 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
14 |
rs74162099 |
chr10:6060085-6060086 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
15 |
rs201955877 |
chr10:6060090-6060091 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
16 |
rs373749136 |
chr10:6060118-6060119 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
17 |
rs3215754 |
chr10:6060172-6060173 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
18 |
rs397840138 |
chr10:6060175-6060176 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
19 |
rs570156062 |
chr10:6060197-6060198 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
20 |
rs111378667 |
chr10:6060199-6060200 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
21 |
rs74162098 |
chr10:6060211-6060212 |
Enhancers Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
22 |
rs56032961 |
chr10:6060234-6060235 |
Enhancers Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
23 |
rs577846037 |
chr10:6060245-6060246 |
Enhancers Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
24 |
rs79040149 |
chr10:6060265-6060266 |
Enhancers Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
25 |
rs12722697 |
chr10:6060290-6060291 |
Enhancers Weak transcription Strong transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
26 |
rs527525530 |
chr10:6060315-6060316 |
Enhancers Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
27 |
rs202060940 |
chr10:6060372-6060373 |
Enhancers Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
28 |
rs369470976 |
chr10:6060373-6060374 |
Enhancers Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
29 |
rs373369015 |
chr10:6060394-6060395 |
Enhancers Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
30 |
rs12722589 |
chr10:6060423-6060424 |
Enhancers Strong transcription ZNF genes & repeats Weak transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
31 |
rs12722588 |
chr10:6060433-6060434 |
Enhancers Strong transcription ZNF genes & repeats Weak transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
32 |
rs528048640 |
chr10:6060462-6060463 |
Enhancers Strong transcription ZNF genes & repeats Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
33 |
rs538940911 |
chr10:6060624-6060625 |
Enhancers Bivalent Enhancer Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
34 |
rs12722587 |
chr10:6060630-6060631 |
Enhancers Bivalent Enhancer Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
35 |
rs11256352 |
chr10:6060631-6060632 |
Enhancers Bivalent Enhancer Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
36 |
rs76140590 |
chr10:6060639-6060640 |
Enhancers Bivalent Enhancer Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
37 |
rs372484011 |
chr10:6060717-6060718 |
Enhancers Bivalent Enhancer Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs375003561 |
chr10:6060835-6060836 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs576098233 |
chr10:6060846-6060847 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs184913967 |
chr10:6060890-6060891 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs558509477 |
chr10:6060957-6060958 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs72776071 |
chr10:6060966-6060967 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers
|
TF binding region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
43 |
rs199965784 |
chr10:6060977-6060978 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs117053021 |
chr10:6060980-6060981 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs111672227 |
chr10:6061010-6061011 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs111164953 |
chr10:6061062-6061063 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs542816766 |
chr10:6061086-6061087 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs200515389 |
chr10:6061089-6061090 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs561082644 |
chr10:6061095-6061096 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs372824153 |
chr10:6061096-6061097 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|