Variant report

Variant	nsv526342
Chromosome Location	chr15:57565859-57597280
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:421)
CpG islands
(count:488)
Chromatin interactive
region (count:21)
LncRNA
region (count:33)
Mature miRNA
region (count: 0)
miRNA target
sites (count:19)

(count:421 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF2	chr15:57591803-57592469	GM12878	blood:	n/a	n/a
2	ATF2	chr15:57592033-57592479	GM12878	blood:	n/a	n/a
3	BCL11A	chr15:57591889-57592454	GM12878	blood:	n/a	chr15:57592091-57592104 chr15:57592122-57592131
4	BCL11A	chr15:57591941-57592256	GM12878	blood:	n/a	chr15:57592091-57592104 chr15:57592122-57592131
5	BCLAF1	chr15:57591895-57592484	GM12878	blood:	n/a	chr15:57592091-57592104 chr15:57592122-57592131
6	BCLAF1	chr15:57591812-57592569	GM12878	blood:	n/a	chr15:57592091-57592104 chr15:57592122-57592131
7	BHLHE40	chr15:57592779-57592966	K562	blood:	n/a	n/a
8	BHLHE40	chr15:57591928-57593506	GM12878	blood:	n/a	n/a
9	CEBPB	chr15:57588783-57588785	HepG2	liver:	n/a	n/a
10	CEBPB	chr15:57591708-57592025	H1-hESC	embryonic stem cell:	n/a	chr15:57591855-57591864 chr15:57591853-57591866 chr15:57591853-57591864
11	CEBPB	chr15:57595119-57595370	HepG2	liver:	n/a	chr15:57595264-57595273 chr15:57595262-57595275 chr15:57595262-57595273
12	CEBPB	chr15:57590495-57590827	IMR90	lung:	n/a	n/a
13	CEBPB	chr15:57591670-57592038	A549	lung:	n/a	chr15:57591855-57591864 chr15:57591853-57591866 chr15:57591853-57591864
14	CEBPB	chr15:57595113-57595424	K562	blood:	n/a	chr15:57595264-57595273 chr15:57595262-57595275 chr15:57595262-57595273
15	CEBPB	chr15:57591676-57592033	HepG2	liver:	n/a	chr15:57591855-57591864 chr15:57591853-57591866 chr15:57591853-57591864
16	CEBPB	chr15:57568074-57568099	HepG2	liver:	n/a	n/a
17	CEBPB	chr15:57595099-57595455	HepG2	liver:	n/a	chr15:57595264-57595273 chr15:57595262-57595275 chr15:57595262-57595273
18	CEBPB	chr15:57593441-57593637	K562	blood:	n/a	chr15:57593556-57593567
19	CEBPB	chr15:57595167-57595353	HepG2	liver:	n/a	chr15:57595264-57595273 chr15:57595262-57595275 chr15:57595262-57595273
20	CEBPB	chr15:57593445-57593656	HepG2	liver:	n/a	chr15:57593556-57593567
21	CEBPB	chr15:57593937-57593997	HepG2	liver:	n/a	chr15:57593943-57593956 chr15:57593944-57593955 chr15:57593943-57593954
22	CEBPB	chr15:57591676-57591988	A549	lung:	n/a	chr15:57591855-57591864 chr15:57591853-57591866 chr15:57591853-57591864
23	CEBPB	chr15:57576041-57576252	K562	blood:	n/a	n/a
24	CEBPB	chr15:57593435-57593658	IMR90	lung:	n/a	chr15:57593556-57593567
25	CEBPB	chr15:57591716-57591988	Hela-S3	cervix:	n/a	chr15:57591855-57591864 chr15:57591853-57591866 chr15:57591853-57591864
26	CEBPB	chr15:57591671-57592095	K562	blood:	n/a	chr15:57591855-57591864 chr15:57591853-57591866 chr15:57591853-57591864
27	CEBPB	chr15:57591674-57592050	IMR90	lung:	n/a	chr15:57591855-57591864 chr15:57591853-57591866 chr15:57591853-57591864
28	CEBPB	chr15:57591694-57591988	K562	blood:	n/a	chr15:57591855-57591864 chr15:57591853-57591866 chr15:57591853-57591864
29	CEBPB	chr15:57588631-57588941	H1-hESC	embryonic stem cell:	n/a	n/a
30	CEBPB	chr15:57591725-57591939	MCF-7	breast:	n/a	chr15:57591855-57591864 chr15:57591853-57591866 chr15:57591853-57591864
31	CEBPB	chr15:57595049-57595549	HepG2	liver:	n/a	chr15:57595264-57595273 chr15:57595262-57595275 chr15:57595262-57595273
32	CHD1	chr15:57592975-57593345	GM12878	blood:	n/a	n/a
33	CHD2	chr15:57593231-57593237	GM12878	blood:	n/a	n/a
34	CHD2	chr15:57591932-57592490	GM12878	blood:	n/a	n/a
35	CTCF	chr15:57595191-57595265	K562	blood:	n/a	n/a
36	CTCF	chr15:57589320-57589470	GM12873	blood:	n/a	chr15:57589415-57589424
37	CTCF	chr15:57588360-57588510	Caco-2	colon:	n/a	n/a
38	CTCF	chr15:57567780-57567930	BJ	skin:	n/a	n/a
39	CTCF	chr15:57567680-57567830	A549	lung:	n/a	n/a
40	CTCF	chr15:57592820-57592970	GM06990	blood:	n/a	n/a
41	CTCF	chr15:57595120-57595270	GM12864	blood:	n/a	n/a
42	CTCF	chr15:57592838-57592921	GM19239	blood:	n/a	n/a
43	CTCF	chr15:57589580-57589730	BJ	skin:	n/a	n/a
44	CTCF	chr15:57573554-57573754	GM12878	blood:	n/a	n/a
45	CTCF	chr15:57566240-57566390	HBMEC	blood vessel:	n/a	n/a
46	CTCF	chr15:57595160-57595310	GM12874	blood:	n/a	n/a
47	CTCF	chr15:57593666-57593772	Spleen_OC	spleen:	n/a	n/a
48	CTCF	chr15:57592820-57592970	GM12864	blood:	n/a	n/a
49	CTCF	chr15:57595170-57595272	K562	blood:	n/a	n/a
50	CTCF	chr15:57597000-57597150	WERI-Rb-1	eye:	n/a	n/a

(count:488 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:57592438-57592488	AG10803	skin:	n/a
2	chr15:57592438-57592488	RPTEC	kidney:	n/a
3	chr15:57592083-57592133	HMEC	breast:	n/a
4	chr15:57592438-57592488	CMK	blood:	n/a
5	chr15:57592083-57592133	HRCEpiC	kidney:	n/a
6	chr15:57592438-57592488	HRCEpiC	kidney:	n/a
7	chr15:57592222-57592272	SKMC	muscle:	n/a
8	chr15:57592083-57592133	NHBE	bronchial:	n/a
9	chr15:57579076-57579126	NH-A	brain:	n/a
10	chr15:57592040-57592090	GM12892	blood:	n/a
11	chr15:57589160-57589210	HAEpiC	amniotic membrane:	n/a
12	chr15:57590030-57590080	CMK	blood:	n/a
13	chr15:57592083-57592133	AG10803	skin:	n/a
14	chr15:57592438-57592488	HCF	heart:	n/a
15	chr15:57579076-57579126	PrEC	prostate:	n/a
16	chr15:57579076-57579126	AG09309	skin:	n/a
17	chr15:57595298-57595348	AoSMC	blood vessel:	n/a
18	chr15:57592083-57592133	SK-N-SH_RA	brain:	n/a
19	chr15:57595298-57595348	HNPCEpiC	eye:	n/a
20	chr15:57595298-57595348	K562	blood:	n/a
21	chr15:57579076-57579126	ProgFib	skin:	n/a
22	chr15:57592040-57592090	HRCEpiC	kidney:	n/a
23	chr15:57592222-57592272	HPAEpiC	pulmonary alveolar:	n/a
24	chr15:57579076-57579126	NT2-D1	testis:	n/a
25	chr15:57595298-57595348	H1-hESC	embryonic stem cell:	embryo
26	chr15:57589160-57589210	PANC-1	pancreas:	n/a
27	chr15:57579076-57579126	Caco-2	colon:	n/a
28	chr15:57592083-57592133	NB4	blood:	n/a
29	chr15:57592083-57592133	NHDF-neo	bronchial:	n/a
30	chr15:57592040-57592090	HMEC	breast:	n/a
31	chr15:57592040-57592090	HEK293	kidney:	embryo
32	chr15:57590030-57590080	HNPCEpiC	eye:	n/a
33	chr15:57590030-57590080	HCF	heart:	n/a
34	chr15:57592040-57592090	AG04450	lung:	fetal
35	chr15:57579076-57579126	HCM	heart:	n/a
36	chr15:57592040-57592090	HRE	kidney:	n/a
37	chr15:57590030-57590080	ovcar-3	ovarian:	n/a
38	chr15:57579076-57579126	PANC-1	pancreas:	n/a
39	chr15:57590030-57590080	GM06990	blood:	n/a
40	chr15:57589160-57589210	HEEpiC	esophagus:	n/a
41	chr15:57592438-57592488	PrEC	prostate:	n/a
42	chr15:57592438-57592488	ECC-1	luminal epithelium:	n/a
43	chr15:57589160-57589210	HIPEpiC	eye:	n/a
44	chr15:57592083-57592133	SK-N-SH	brain:	n/a
45	chr15:57592438-57592488	MCF-7	breast:	n/a
46	chr15:57579076-57579126	Jurkat	blood:	n/a
47	chr15:57589160-57589210	RPTEC	kidney:	n/a
48	chr15:57592438-57592488	Caco-2	colon:	n/a
49	chr15:57592438-57592488	NT2-D1	testis:	n/a
50	chr15:57592040-57592090	AG04449	skin:	fetal

(count:21 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr15:57576732..57578817-chr15:57580600..57582934,2	K562	blood:
2	chr15:57576964..57581094-chr15:57584110..57586984,5	K562	blood:
3	chr15:57575333..57577796-chr15:57582092..57585036,2	K562	blood:
4	chr15:57576732..57578817-chr15:57580600..57582934,2	K562	blood:
5	chr15:57523231..57525138-chr15:57581607..57583669,2	K562	blood:
6	chr15:57574753..57576261-chr15:57580804..57583117,2	K562	blood:
7	chr15:57579113..57581094-chr15:57584110..57586984,2	K562	blood:
8	chr15:57582041..57585604-chr15:57586782..57591985,5	K562	blood:
9	chr15:57574753..57576261-chr15:57580804..57583117,2	K562	blood:
10	chr15:57582135..57584182-chr15:57589221..57591985,2	K562	blood:
11	chr15:57582135..57584182-chr15:57589221..57591985,2	K562	blood:
12	chr15:57582041..57585604-chr15:57586782..57591985,5	K562	blood:
13	chr15:57588417..57590307-chr15:57592744..57595404,2	K562	blood:
14	chr15:57564291..57566333-chr15:57603914..57606752,2	K562	blood:
15	chr15:57576964..57581094-chr15:57584110..57586984,5	K562	blood:
16	chr15:57579113..57581094-chr15:57584110..57586984,2	K562	blood:
17	chr15:57572963..57574915-chr15:57577135..57578726,2	K562	blood:
18	chr15:57596677..57601983-chr15:57611239..57618411,9	K562	blood:
19	chr15:57588417..57590307-chr15:57592744..57595404,2	K562	blood:
20	chr10:114709342..114710106-chr15:57591884..57592412,2	NB4	blood:
21	chr15:57575333..57577796-chr15:57582092..57585036,2	K562	blood:

(count:33 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-TCF12-1	chr15:57592039-57593122	XLOC_011264
2	lnc-TCF12-1	chr15:57595100-57599967	XLOC_011264
3	lnc-TCF12-1	chr15:57592286-57593122	XLOC_011264
4	lnc-TCF12-1	chr15:57592705-57593122	XLOC_011264
5	lnc-TCF12-1	chr15:57592563-57593122	XLOC_011264
6	lnc-TCF12-1	chr15:57594547-57595211	XLOC_011264
7	lnc-TCF12-1	chr15:57592039-57593122	XLOC_011264
8	lnc-TCF12-1	chr15:57595100-57595211	XLOC_011264
9	lnc-TCF12-1	chr15:57592198-57595211	XLOC_011264
10	lnc-TCF12-1	chr15:57592563-57593122	NONHSAT044062
11	lnc-TCF12-1	chr15:57595271-57595351	XLOC_011264
12	lnc-TCF12-1	chr15:57592516-57593122	NONHSAT044059
13	lnc-TCF12-1	chr15:57592563-57593122	ENSG00000247982
14	lnc-TCF12-1	chr15:57595100-57599266	XLOC_011264
15	lnc-TCF12-1	chr15:57595298-57595329	XLOC_011264
16	lnc-TCF12-1	chr15:57595298-57595329	XLOC_011264
17	lnc-TCF12-1	chr15:57595781-57596815	ENSG00000247982
18	lnc-TCF12-1	chr15:57592549-57593122	XLOC_011264
19	lnc-TCF12-1	chr15:57592503-57593122	XLOC_011264
20	lnc-TCF12-1	chr15:57592503-57593122	XLOC_011264
21	lnc-TCF12-1	chr15:57592563-57593122	XLOC_011264
22	lnc-TCF12-1	chr15:57595298-57595329	XLOC_011264
23	lnc-TCF12-1	chr15:57595298-57599266	XLOC_011264
24	lnc-TCF12-1	chr15:57593637-57593790	XLOC_011264
25	lnc-TCF12-1	chr15:57596923-57598820	ENSG00000247982
26	lnc-TCF12-1	chr15:57595298-57595329	XLOC_011264
27	lnc-TCF12-1	chr15:57594499-57595211	XLOC_011264
28	lnc-TCF12-1	chr15:57595100-57596248	XLOC_011264
29	lnc-TCF12-1	chr15:57595100-57595211	XLOC_011264
30	lnc-TCF12-1	chr15:57592503-57593122	XLOC_011264
31	lnc-TCF12-1	chr15:57595725-57596125	NONHSAT044059
32	lnc-TCF12-1	chr15:57593541-57595211	NONHSAT044059
33	lnc-TCF12-1	chr15:57592503-57593122	XLOC_011264

No data

(count:19 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location
1	TCF12	hsa-miR-155-5p	chr15:57580419-57580440
2	TCF12	hsa-miR-204-5p	chr15:57579268-57579289
3	TCF12	hsa-miR-26b-5p	chr15:57574909-57574915
4	TCF12	hsa-miR-204-5p	chr15:57578731-57578750
5	TCF12	hsa-miR-211-5p	chr15:57578730-57578750
6	TCF12	hsa-miR-26b-5p	chr15:57580272-57580292
7	TCF12	hsa-miR-26b-5p	chr15:57578947-57578967
8	TCF12	hsa-miR-211-5p	chr15:57579145-57579166
9	TCF12	hsa-miR-211-5p	chr15:57575185-57575192
10	TCF12	hsa-miR-211-5p	chr15:57579268-57579289
11	TCF12	hsa-miR-375	chr15:57576362-57576368
12	TCF12	hsa-miR-204-5p	chr15:57579144-57579165
13	TCF12	hsa-miR-204-5p	chr15:57575185-57575192
14	TCF12	hsa-miR-204-5p	chr15:57578870-57578891
15	TCF12	hsa-miR-155-5p	chr15:57579635-57579657
16	TCF12	hsa-miR-211-5p	chr15:57578870-57578891
17	TCF12	hsa-miR-155-5p	chr15:57579134-57579156
18	TCF12	hsa-miR-155-5p	chr15:57578952-57578977
19	TCF12	hsa-miR-375	chr15:57579905-57579926

Variant related genes	Relation type
ENSG00000239035	TF binding region
LINC00926	TF binding region
TCF12	TF binding region
ENSG00000239035	CpG island
LINC00926	CpG island
TCF12	CpG island
ENSG00000260172	chromatin interactions
ENSG00000148737	chromatin interactions
ENSG00000140262	chromatin interactions
ZNF417	miRNA target sites
PAPD4	miRNA target sites
VEGFA	miRNA target sites
JAK2	miRNA target sites
WIPF1	miRNA target sites
DLC1	miRNA target sites
PLEKHA1	miRNA target sites
GPAM	miRNA target sites
WIPI2	miRNA target sites
JAK1	miRNA target sites
GNPDA2	miRNA target sites
ZNF567	miRNA target sites
TSPAN4	miRNA target sites

Extended variants
information (count: 1296 )
Associated
traits (count: 62 )

Variant overlapped rSNPs/rCNVs (count:1296 , 50 per page) page: 1 2 3 4 5 6 7 ... 26

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2431032	chr15:57565859-57565860	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs554469970	chr15:57565869-57565870	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs147952564	chr15:57565870-57565871	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs553404833	chr15:57565879-57565880	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs374890398	chr15:57565894-57565895	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs573237616	chr15:57565903-57565904	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs541857296	chr15:57565908-57565909	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs192433702	chr15:57565924-57565925	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs182983007	chr15:57565964-57565965	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs575582506	chr15:57566008-57566009	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs188752056	chr15:57566011-57566012	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs564538503	chr15:57566014-57566015	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs145734874	chr15:57566055-57566056	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs540447865	chr15:57566121-57566122	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs560226558	chr15:57566128-57566129	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs575951609	chr15:57566132-57566133	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs549045864	chr15:57566139-57566140	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs192836527	chr15:57566180-57566181	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs540139531	chr15:57566207-57566208	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs568823871	chr15:57566238-57566239	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs540057934	chr15:57566244-57566245	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs531648231	chr15:57566259-57566260	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs113130635	chr15:57566276-57566277	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs16977359	chr15:57566348-57566349	Weak transcription Strong transcription Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
25	rs552780283	chr15:57566352-57566353	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs189390268	chr15:57566378-57566379	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs547260733	chr15:57566416-57566417	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs79445459	chr15:57566427-57566428	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs77431520	chr15:57566495-57566496	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs535553111	chr15:57566550-57566551	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs555348194	chr15:57566554-57566555	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs191615055	chr15:57566571-57566572	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs374644075	chr15:57566601-57566602	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs138737165	chr15:57566609-57566610	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs11857722	chr15:57566632-57566633	Weak transcription Strong transcription Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
36	rs578174464	chr15:57566655-57566656	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs114479442	chr15:57566657-57566658	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs560516830	chr15:57566697-57566698	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs112040756	chr15:57566763-57566764	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs115370883	chr15:57566823-57566824	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs543176969	chr15:57566844-57566845	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs150350271	chr15:57566855-57566856	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs2440973	chr15:57566857-57566858	Weak transcription Strong transcription Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
44	rs117827887	chr15:57566893-57566894	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs527583977	chr15:57566937-57566938	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs547619656	chr15:57566942-57566943	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs567078206	chr15:57566987-57566988	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs28460343	chr15:57567002-57567003	Weak transcription Strong transcription Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
49	rs542609103	chr15:57567057-57567058	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs549036015	chr15:57567091-57567092	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:62)

Disease	PMID	Source
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Testicular germ cell tumor	18059402	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Melanoma	18172304	CNVD
Colorectal cancer	16774939	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
Intellectual disability	22102821	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Prostate cancer	16573809	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Lung cancer	18438408	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Prostate cancer	18632612	CNVD
small cell lung cancer	20016488	CNVD
Basal cell lymphoma	17053054	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Cancer	21129771	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Abnormal phenotypes	18644119	CNVD
Cancer	16751803	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Acute monocytic leukemia	16498392	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Breast cancer	17133270	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Non-syndromic sensorineural hearing loss	18496225	CNVD
Congenital diaphragmatic hernia	21341218	CNVD
Holoprosencephaly	21359414	CNVD
Myelofibrosis	22110671	CNVD
Adenocarcinoma	19607727	CNVD
Squamous cell cancer	19607727	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:1000 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:57520400-57576000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
2	chr15:57522800-57585000	Strong transcription	Fetal Thymus	thymus
3	chr15:57526600-57574200	Weak transcription	Hela-S3	cervix
4	chr15:57533600-57568800	Weak transcription	Pancreatic Islets	Pancreatic Islet
5	chr15:57536800-57574200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
6	chr15:57537800-57598200	Weak transcription	Colonic Mucosa	Colon
7	chr15:57539400-57574800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
8	chr15:57544600-57574800	Weak transcription	Fetal Brain Male	brain
9	chr15:57546000-57580600	Weak transcription	Placenta Amnion	Placenta Amnion
10	chr15:57548200-57578000	Weak transcription	Fetal Heart	heart
11	chr15:57552200-57573200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
12	chr15:57552200-57588600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
13	chr15:57552400-57578600	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr15:57553200-57585000	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
15	chr15:57554200-57568800	Strong transcription	Primary T cells from cord blood	blood
16	chr15:57556200-57580600	Weak transcription	Stomach Mucosa	stomach
17	chr15:57557000-57584600	Weak transcription	Colon Smooth Muscle	Colon
18	chr15:57557600-57578000	Weak transcription	Pancreas	Pancrea
19	chr15:57557600-57588600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
20	chr15:57558200-57573600	Weak transcription	Skeletal Muscle Male	skeletal muscle
21	chr15:57562400-57567800	Strong transcription	Fetal Intestine Large	intestine
22	chr15:57562400-57568600	Strong transcription	Primary hematopoietic stem cells	blood
23	chr15:57562600-57569400	Strong transcription	Monocytes-CD14+_RO01746	blood
24	chr15:57562600-57575600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
25	chr15:57562600-57578000	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
26	chr15:57562600-57584200	Strong transcription	Fetal Muscle Trunk	muscle
27	chr15:57562600-57584600	Strong transcription	Fetal Muscle Leg	muscle
28	chr15:57563200-57572000	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
29	chr15:57563400-57568600	Strong transcription	HUES64 Cell Line	embryonic stem cell
30	chr15:57563400-57569600	Strong transcription	Duodenum Mucosa	Duodenum
31	chr15:57563800-57568600	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
32	chr15:57563800-57568600	Strong transcription	Primary T helper cells fromperipheralblood	blood
33	chr15:57564000-57582400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
34	chr15:57564000-57583600	Strong transcription	Dnd41	blood
35	chr15:57564200-57568400	Strong transcription	Primary B cells from cord blood	blood
36	chr15:57564200-57568800	Strong transcription	K562	blood
37	chr15:57564400-57566400	Strong transcription	GM12878-XiMat	blood
38	chr15:57564400-57568000	Strong transcription	Primary T cells fromperipheralblood	blood
39	chr15:57564400-57568400	Strong transcription	Primary monocytes fromperipheralblood	blood
40	chr15:57564400-57568600	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
41	chr15:57564400-57568600	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
42	chr15:57564400-57568800	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
43	chr15:57564400-57568800	Strong transcription	iPS-20b Cell Line	embryonic stem cell
44	chr15:57564400-57569400	Strong transcription	Primary T helper cells PMA-I stimulated	--
45	chr15:57564600-57568400	Strong transcription	Duodenum Smooth Muscle	Duodenum
46	chr15:57564600-57568600	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
47	chr15:57564600-57568600	Strong transcription	NH-A	brain
48	chr15:57564600-57568800	Strong transcription	Liver	Liver
49	chr15:57564800-57566200	Strong transcription	Primary T helper 17 cells PMA-I stimulated	--
50	chr15:57564800-57567400	Strong transcription	A549	lung

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