No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs5914778 |
chrX:56758231-56758232 |
Active TSS Weak transcription Strong transcription Enhancers Flanking Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
2 |
rs192897343 |
chrX:56758323-56758324 |
Active TSS Weak transcription Strong transcription Enhancers Flanking Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs182761871 |
chrX:56758346-56758347 |
Active TSS Weak transcription Strong transcription Enhancers Flanking Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs187788120 |
chrX:56758494-56758495 |
Active TSS Weak transcription Strong transcription Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs192647563 |
chrX:56758693-56758694 |
Weak transcription Strong transcription Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs184586149 |
chrX:56758973-56758974 |
Weak transcription Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs189031975 |
chrX:56759096-56759097 |
Weak transcription Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs191878184 |
chrX:56759110-56759111 |
Weak transcription Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs547133313 |
chrX:56759328-56759329 |
Weak transcription Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs377456494 |
chrX:56759365-56759366 |
Weak transcription Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs12690340 |
chrX:56759371-56759372 |
Weak transcription Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
12 |
rs201981508 |
chrX:56759406-56759407 |
Weak transcription Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs66887234 |
chrX:56759407-56759408 |
Weak transcription Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs12839871 |
chrX:56759445-56759446 |
Weak transcription Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs565776270 |
chrX:56759492-56759493 |
Weak transcription Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs184909955 |
chrX:56759526-56759527 |
Weak transcription Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs189747271 |
chrX:56759655-56759656 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
18 |
rs181335954 |
chrX:56759796-56759797 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
19 |
rs199734319 |
chrX:56759833-56759834 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
20 |
rs5913992 |
chrX:56760004-56760005 |
Weak transcription Strong transcription Enhancers Bivalent Enhancer
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
21 |
rs34202128 |
chrX:56760031-56760032 |
Weak transcription Strong transcription Enhancers Bivalent Enhancer
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
22 |
rs72621715 |
chrX:56760126-56760127 |
Weak transcription Strong transcription Enhancers Bivalent Enhancer
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
23 |
rs140986251 |
chrX:56760275-56760276 |
Strong transcription Weak transcription Enhancers Bivalent Enhancer Genic enhancers
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
24 |
rs189393496 |
chrX:56760425-56760426 |
Strong transcription Weak transcription ZNF genes & repeats Enhancers Genic enhancers
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
25 |
rs28706907 |
chrX:56760558-56760559 |
Strong transcription Weak transcription ZNF genes & repeats Enhancers Genic enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
26 |
rs181967804 |
chrX:56760643-56760644 |
Strong transcription Weak transcription ZNF genes & repeats Enhancers
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
27 |
rs138582999 |
chrX:56760817-56760818 |
Strong transcription Weak transcription ZNF genes & repeats Enhancers
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
28 |
rs186292422 |
chrX:56761142-56761143 |
Strong transcription Weak transcription ZNF genes & repeats Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
29 |
rs149260489 |
chrX:56761229-56761230 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
30 |
rs6521511 |
chrX:56761346-56761347 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
31 |
rs190675286 |
chrX:56761383-56761384 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
32 |
rs147973317 |
chrX:56761647-56761648 |
Weak transcription Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
33 |
rs141636305 |
chrX:56761847-56761848 |
Weak transcription Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
34 |
rs376173340 |
chrX:56761899-56761900 |
Weak transcription Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
35 |
rs559809280 |
chrX:56761901-56761902 |
Weak transcription Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
36 |
rs2873172 |
chrX:56761922-56761923 |
Weak transcription Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
37 |
rs141047689 |
chrX:56761968-56761969 |
Weak transcription Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
38 |
rs551754346 |
chrX:56762122-56762123 |
Weak transcription Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
39 |
rs181733252 |
chrX:56762203-56762204 |
Weak transcription Strong transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
40 |
rs186960580 |
chrX:56762240-56762241 |
Weak transcription Strong transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
41 |
rs191305437 |
chrX:56762248-56762249 |
Weak transcription Strong transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
42 |
rs532926762 |
chrX:56762253-56762254 |
Weak transcription Strong transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
43 |
rs59743966 |
chrX:56762395-56762396 |
Weak transcription Strong transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
44 |
rs183220521 |
chrX:56762477-56762478 |
Weak transcription Strong transcription Enhancers
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
45 |
rs187659002 |
chrX:56762518-56762519 |
Weak transcription Strong transcription Enhancers
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
46 |
rs60464842 |
chrX:56762634-56762635 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers Active TSS
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
47 |
rs6612629 |
chrX:56762778-56762779 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers Active TSS
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
48 |
rs189615442 |
chrX:56762786-56762787 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers Active TSS
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
49 |
rs371081074 |
chrX:56762946-56762947 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
50 |
rs183238167 |
chrX:56762962-56762963 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|