Variant report

Variant	nsv527724
Chromosome Location	chr3:119353844-119361415
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr3:119357780-119358258	K562	blood:	n/a	n/a
2	ATF1	chr3:119357683-119358146	K562	blood:	n/a	n/a
3	ATF1	chr3:119356802-119357163	K562	blood:	n/a	n/a
4	ATF2	chr3:119357395-119358814	GM12878	blood:	n/a	n/a
5	ATF2	chr3:119356719-119358867	GM12878	blood:	n/a	n/a
6	ATF2	chr3:119356350-119357387	GM12878	blood:	n/a	n/a
7	ATF3	chr3:119357763-119357998	K562	blood:	n/a	chr3:119357913-119357926 chr3:119357864-119357873
8	ATF3	chr3:119357661-119358083	K562	blood:	n/a	chr3:119357913-119357926 chr3:119357864-119357873
9	ATF3	chr3:119357698-119358131	GM12878	blood:	n/a	chr3:119357913-119357926 chr3:119357864-119357873
10	BATF	chr3:119358245-119358943	GM12878	blood:	n/a	chr3:119358624-119358635 chr3:119358546-119358557
11	BATF	chr3:119357579-119358133	GM12878	blood:	n/a	n/a
12	BATF	chr3:119356745-119357371	GM12878	blood:	n/a	n/a
13	BATF	chr3:119358351-119358792	GM12878	blood:	n/a	chr3:119358624-119358635 chr3:119358546-119358557
14	BATF	chr3:119357762-119358135	GM12878	blood:	n/a	n/a
15	BATF	chr3:119356671-119357365	GM12878	blood:	n/a	n/a
16	BCL11A	chr3:119357433-119358201	GM12878	blood:	n/a	chr3:119358021-119358030
17	BCL11A	chr3:119357774-119358146	GM12878	blood:	n/a	chr3:119358021-119358030
18	BCL11A	chr3:119358338-119358816	GM12878	blood:	n/a	chr3:119358550-119358559 chr3:119358549-119358558
19	BCL11A	chr3:119356697-119357350	GM12878	blood:	n/a	n/a
20	BCL3	chr3:119357423-119358829	GM12878	blood:	n/a	chr3:119358550-119358559 chr3:119358021-119358030 chr3:119358549-119358558
21	BCLAF1	chr3:119356747-119358229	GM12878	blood:	n/a	chr3:119358021-119358030
22	BCLAF1	chr3:119356768-119358811	GM12878	blood:	n/a	chr3:119358550-119358559 chr3:119358021-119358030 chr3:119358549-119358558
23	BHLHE40	chr3:119357749-119357994	HepG2	liver:	n/a	n/a
24	BHLHE40	chr3:119356827-119358449	GM12878	blood:	n/a	n/a
25	BHLHE40	chr3:119356755-119357186	K562	blood:	n/a	n/a
26	BHLHE40	chr3:119357579-119358149	K562	blood:	n/a	n/a
27	CCNT2	chr3:119356881-119358023	K562	blood:	n/a	chr3:119357579-119357588
28	CEBPB	chr3:119357679-119358041	HepG2	liver:	n/a	chr3:119357855-119357866 chr3:119357854-119357867
29	CEBPB	chr3:119357666-119358052	IMR90	lung:	n/a	chr3:119357855-119357866 chr3:119357854-119357867
30	CEBPB	chr3:119357655-119358121	K562	blood:	n/a	chr3:119357855-119357866 chr3:119357854-119357867
31	CEBPB	chr3:119357722-119358122	GM12878	blood:	n/a	chr3:119357855-119357866 chr3:119357854-119357867
32	CEBPB	chr3:119357706-119358031	A549	lung:	n/a	chr3:119357855-119357866 chr3:119357854-119357867
33	CEBPB	chr3:119357695-119358036	Hela-S3	cervix:	n/a	chr3:119357855-119357866 chr3:119357854-119357867
34	CEBPB	chr3:119357593-119358064	K562	blood:	n/a	chr3:119357855-119357866 chr3:119357854-119357867
35	CEBPB	chr3:119357666-119358046	K562	blood:	n/a	chr3:119357855-119357866 chr3:119357854-119357867
36	CEBPB	chr3:119357658-119358139	HCT-116	colon:	n/a	chr3:119357855-119357866 chr3:119357854-119357867
37	CEBPB	chr3:119357826-119357967	H1-hESC	embryonic stem cell:	n/a	chr3:119357855-119357866 chr3:119357854-119357867
38	CEBPB	chr3:119356654-119358982	GM12878	blood:	n/a	chr3:119357855-119357866 chr3:119357854-119357867
39	CHD1	chr3:119356809-119358320	GM12878	blood:	n/a	n/a
40	CHD2	chr3:119356906-119358581	GM12878	blood:	n/a	n/a
41	CHD2	chr3:119357826-119357980	Hela-S3	cervix:	n/a	n/a
42	CREB1	chr3:119357424-119358233	GM12878	blood:	n/a	n/a
43	CREB1	chr3:119356463-119358897	GM12878	blood:	n/a	n/a
44	CTCF	chr3:119354640-119354790	RPTEC	kidney:	n/a	n/a
45	CTCF	chr3:119354724-119354978	K562	blood:	n/a	n/a
46	CTCF	chr3:119354780-119354930	WERI-Rb-1	eye:	n/a	n/a
47	CTCF	chr3:119354779-119354911	GM12892	blood:	n/a	n/a
48	CTCF	chr3:119354800-119354950	HPAF	blood vessel:	n/a	n/a
49	CTCF	chr3:119354757-119354914	H1-hESC	embryonic stem cell:	n/a	n/a
50	CTCF	chr3:119354760-119354910	GM12872	blood:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:119361179-119361229	ProgFib	skin:	n/a
2	chr3:119361179-119361229	GM12891	blood:	n/a
3	chr3:119361179-119361229	GM19239	blood:	n/a
4	chr3:119361179-119361229	SK-N-SH	brain:	n/a
5	chr3:119361179-119361229	HEEpiC	esophagus:	n/a
6	chr3:119361179-119361229	AG04449	skin:	fetal
7	chr3:119361179-119361229	NHBE	bronchial:	n/a
8	chr3:119361179-119361229	HEK293	kidney:	embryo
9	chr3:119361179-119361229	A549	lung:	n/a
10	chr3:119361179-119361229	GM12892	blood:	n/a
11	chr3:119361179-119361229	IMR90	lung:	fetal
12	chr3:119361179-119361229	NHDF-neo	bronchial:	n/a
13	chr3:119361179-119361229	H1-hESC	embryonic stem cell:	embryo
14	chr3:119361179-119361229	ovcar-3	ovarian:	n/a
15	chr3:119361179-119361229	GM12878	blood:	n/a
16	chr3:119361179-119361229	HRCEpiC	kidney:	n/a
17	chr3:119361179-119361229	HRE	kidney:	n/a
18	chr3:119361179-119361229	Caco-2	colon:	n/a
19	chr3:119361179-119361229	T-47D	breast:	n/a
20	chr3:119361179-119361229	RPTEC	kidney:	n/a
21	chr3:119361179-119361229	PrEC	prostate:	n/a
22	chr3:119361179-119361229	HAEpiC	amniotic membrane:	n/a
23	chr3:119361179-119361229	HCT-116	colon:	n/a
24	chr3:119361179-119361229	HIPEpiC	eye:	n/a
25	chr3:119361179-119361229	NB4	blood:	n/a
26	chr3:119361179-119361229	NH-A	brain:	n/a
27	chr3:119361179-119361229	HRPEpiC	eye:	n/a
28	chr3:119361179-119361229	SK-N-SH_RA	brain:	n/a
29	chr3:119361179-119361229	MCF10A-Er-Src	breast:	n/a
30	chr3:119361179-119361229	NT2-D1	testis:	n/a
31	chr3:119361179-119361229	MCF-7	breast:	n/a
32	chr3:119361179-119361229	ECC-1	luminal epithelium:	n/a
33	chr3:119361179-119361229	AG09309	skin:	n/a
34	chr3:119361179-119361229	GM06990	blood:	n/a
35	chr3:119361179-119361229	K562	blood:	n/a
36	chr3:119361179-119361229	BJ	skin:	n/a
37	chr3:119361179-119361229	HPAEpiC	pulmonary alveolar:	n/a
38	chr3:119361179-119361229	AG09319	gingival:	n/a
39	chr3:119361179-119361229	Hela-S3	cervix:	n/a
40	chr3:119361179-119361229	BE2_C	brain:	n/a
41	chr3:119361179-119361229	PANC-1	pancreas:	n/a
42	chr3:119361179-119361229	AoSMC	blood vessel:	n/a
43	chr3:119361179-119361229	CMK	blood:	n/a
44	chr3:119361179-119361229	LNCaP	prostate:	n/a
45	chr3:119361179-119361229	SAEC	small airway:	n/a
46	chr3:119361179-119361229	Hepatocyte	liver:	n/a
47	chr3:119361179-119361229	Jurkat	blood:	n/a
48	chr3:119361179-119361229	HCF	heart:	n/a
49	chr3:119361179-119361229	HMEC	breast:	n/a
50	chr3:119361179-119361229	U87	brain:	n/a

No.	Distal block	Cell Line	Cell type
1	chr3:119297207..119300144-chr3:119352679..119354693,2	MCF-7	breast:
2	chr3:119180931..119183365-chr3:119356123..119357901,2	MCF-7	breast:
3	chr3:119355104..119356665-chr3:119359282..119361780,2	K562	blood:
4	chr3:119348305..119350713-chr3:119351647..119354186,2	MCF-7	breast:
5	chr3:119326194..119327898-chr3:119353631..119355784,2	K562	blood:
6	chr3:119344313..119346275-chr3:119356031..119358042,2	K562	blood:
7	chr3:119356916..119358623-chr3:119366628..119369264,2	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-POPDC2-2	chr3:119354373-119354997	NONHSAT091397

Variant related genes	Relation type
POPDC2	TF binding region
ENSG00000242052	TF binding region
POPDC2	CpG island
ENSG00000242052	CpG island
ENSG00000272967	chromatin interactions
ENSG00000176142	chromatin interactions
ENSG00000144843	chromatin interactions
ENSG00000121577	chromatin interactions
ENSG00000144837	chromatin interactions

Extended variants
information (count: 323 )
Associated
traits (count: 58 )

Variant overlapped rSNPs/rCNVs (count:323 , 50 per page) page: 1 2 3 4 5 6 7

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2692618	chr3:119353844-119353845	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs16830097	chr3:119353893-119353894	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
3	rs180697728	chr3:119353894-119353895	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
4	rs146225433	chr3:119353904-119353905	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
5	rs185754831	chr3:119353932-119353933	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
6	rs6797667	chr3:119353938-119353939	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
7	rs547725869	chr3:119353977-119353978	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
8	rs35043554	chr3:119353995-119353996	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
9	rs572091235	chr3:119353999-119354000	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
10	rs545835021	chr3:119354032-119354033	Weak transcription Enhancers Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
11	rs557348689	chr3:119354033-119354034	Weak transcription Enhancers Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
12	rs575605268	chr3:119354041-119354042	Weak transcription Enhancers Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
13	rs542993267	chr3:119354084-119354085	Weak transcription Enhancers Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
14	rs548879838	chr3:119354088-119354089	Weak transcription Enhancers Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
15	rs368486231	chr3:119354095-119354096	Weak transcription Enhancers Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
16	rs562708749	chr3:119354133-119354134	Weak transcription Enhancers Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
17	rs530322072	chr3:119354135-119354136	Weak transcription Enhancers Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
18	rs542107996	chr3:119354175-119354176	Weak transcription Enhancers Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
19	rs116352082	chr3:119354203-119354204	Weak transcription Enhancers Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
20	rs71325388	chr3:119354257-119354258	Weak transcription Enhancers Strong transcription	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
21	rs537716142	chr3:119354300-119354301	Weak transcription Enhancers Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
22	rs35651446	chr3:119354301-119354302	Weak transcription Enhancers Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
23	rs397803498	chr3:119354311-119354312	Weak transcription Enhancers Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
24	rs552604331	chr3:119354348-119354349	Weak transcription Enhancers Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
25	rs190124241	chr3:119354376-119354377	Weak transcription Enhancers Strong transcription	Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
26	rs551892932	chr3:119354414-119354415	Weak transcription Strong transcription Enhancers	Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
27	rs571814590	chr3:119354432-119354433	Weak transcription Strong transcription Enhancers	Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
28	rs113802681	chr3:119354433-119354434	Weak transcription Strong transcription Enhancers	Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
29	rs376753485	chr3:119354467-119354468	Weak transcription Strong transcription Enhancers	Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
30	rs550183402	chr3:119354489-119354490	Weak transcription Strong transcription Enhancers	Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
31	rs568403386	chr3:119354493-119354494	Weak transcription Strong transcription Enhancers	Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
32	rs71325389	chr3:119354550-119354551	Weak transcription Strong transcription Enhancers	Chromatin interactive region lncRNA	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
33	rs553687221	chr3:119354562-119354563	Weak transcription Strong transcription Enhancers	Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
34	rs547803629	chr3:119354595-119354596	Weak transcription Strong transcription Enhancers	Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
35	rs371838788	chr3:119354602-119354603	Weak transcription Strong transcription Enhancers	Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
36	rs567826972	chr3:119354609-119354610	Weak transcription Strong transcription Enhancers	Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
37	rs536974428	chr3:119354612-119354613	Weak transcription Strong transcription Enhancers	Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
38	rs565835240	chr3:119354651-119354652	Weak transcription Strong transcription Enhancers	Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
39	rs556434863	chr3:119354694-119354695	Weak transcription Strong transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
40	rs139197225	chr3:119354698-119354699	Weak transcription Strong transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
41	rs557459497	chr3:119354731-119354732	Weak transcription Strong transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
42	rs575716207	chr3:119354735-119354736	Weak transcription Strong transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
43	rs144004285	chr3:119354736-119354737	Weak transcription Strong transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
44	rs56098567	chr3:119354742-119354743	Weak transcription Strong transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs575036871	chr3:119354756-119354757	Weak transcription Strong transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
46	rs542470134	chr3:119354760-119354761	Weak transcription Strong transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
47	rs576570775	chr3:119354761-119354762	Weak transcription Strong transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
48	rs560533817	chr3:119354765-119354766	Weak transcription Strong transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
49	rs149222665	chr3:119354776-119354777	Weak transcription Strong transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
50	rs183174003	chr3:119354822-119354823	Weak transcription Enhancers Strong transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:58)

Disease	PMID	Source
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Cancer	21183584	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Bipolar disorder	20877625	CNVD
Bipolar disorder	21956041	CNVD
Bipolar disorder	22241247	CNVD
Biliary cancer	18923514	CNVD
Prostate cancer	21965145	CNVD
Cancer	21129771	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Cervical cancer	21062161	CNVD
Squamous cell cancer	20885788	CNVD
Melanoma	18172304	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Bipolar disorder	18458673	CNVD
Breast cancer	22032731	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Breast cancer	16461572	CNVD
Neuroblastoma	17533364	CNVD
microdeletion syndrome	22180640	CNVD
Cervical Cancer	21857958	CNVD
Melanoma	21693616	CNVD
Lung cancer	21426551	CNVD
Cancer	21637783	CNVD
Cervical cancer	21063398	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oral cancer	21386901	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	22065749	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	16608533	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Developmental delay	22180640	CNVD
Multiple myeloma	17550852	CNVD
Basal cell lymphoma	21115979	CNVD
Ovarian cancer	22174824	CNVD
lymphocytic leukemia	21291569	CNVD
small cell lung cancer	20016488	CNVD
Cancer	20164920	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Glioblastoma multiforme	22286061	CNVD
Neurodevelopmental disorder	22521361	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD

Chromatin state (count:419 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:119340800-119357600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr3:119341400-119364600	Weak transcription	Liver	Liver
3	chr3:119345200-119357600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr3:119345800-119355200	Weak transcription	Brain Hippocampus Middle	brain
5	chr3:119347800-119356400	Weak transcription	Fetal Thymus	thymus
6	chr3:119349400-119357600	Weak transcription	Fetal Intestine Small	intestine
7	chr3:119349600-119354400	Weak transcription	Fetal Stomach	stomach
8	chr3:119349600-119355000	Weak transcription	Spleen	Spleen
9	chr3:119349600-119357000	Weak transcription	Duodenum Mucosa	Duodenum
10	chr3:119349800-119354400	Weak transcription	Right Atrium	heart
11	chr3:119349800-119355000	Weak transcription	Primary hematopoietic stem cells	blood
12	chr3:119349800-119356400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
13	chr3:119349800-119356400	Weak transcription	Fetal Muscle Leg	muscle
14	chr3:119349800-119357000	Weak transcription	Duodenum Smooth Muscle	Duodenum
15	chr3:119349800-119378800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
16	chr3:119350000-119354400	Weak transcription	Lung	lung
17	chr3:119350000-119354600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
18	chr3:119350000-119354600	Weak transcription	GM12878-XiMat	blood
19	chr3:119350000-119354600	Weak transcription	HUVEC	blood vessel
20	chr3:119350000-119354800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
21	chr3:119350000-119354800	Weak transcription	NHDF-Ad	bronchial
22	chr3:119350000-119355000	Weak transcription	NH-A	brain
23	chr3:119350000-119355000	Weak transcription	NHLF	lung
24	chr3:119350000-119355200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
25	chr3:119350400-119354800	Weak transcription	HSMM	muscle
26	chr3:119350400-119355000	Weak transcription	HSMMtube	muscle
27	chr3:119350600-119354800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
28	chr3:119350600-119355000	Weak transcription	Osteobl	bone
29	chr3:119350800-119354000	Weak transcription	Placenta	Placenta
30	chr3:119351000-119354800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
31	chr3:119351000-119355000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
32	chr3:119351000-119355000	Weak transcription	Muscle Satellite Cultured Cells	--
33	chr3:119351200-119354800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
34	chr3:119351400-119354600	Weak transcription	Pancreas	Pancrea
35	chr3:119351400-119354600	Weak transcription	Psoas Muscle	Psoas
36	chr3:119351400-119354800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
37	chr3:119351400-119355000	Weak transcription	K562	blood
38	chr3:119351400-119355400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
39	chr3:119351600-119354400	Weak transcription	Adipose Nuclei	Adipose
40	chr3:119351600-119355200	Weak transcription	Placenta Amnion	Placenta Amnion
41	chr3:119351800-119354000	Weak transcription	Fetal Heart	heart
42	chr3:119351800-119356400	Weak transcription	Colon Smooth Muscle	Colon
43	chr3:119352000-119354000	Weak transcription	Left Ventricle	heart
44	chr3:119352000-119354400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
45	chr3:119352000-119354600	Weak transcription	Skeletal Muscle Male	skeletal muscle
46	chr3:119352000-119355000	Weak transcription	Primary monocytes fromperipheralblood	blood
47	chr3:119352000-119355000	Weak transcription	Monocytes-CD14+_RO01746	blood
48	chr3:119352000-119357400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
49	chr3:119352000-119378600	Weak transcription	Thymus	Thymus
50	chr3:119352600-119354200	Weak transcription	Right Ventricle	heart

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links