Variant report

Variant nsv5385
Chromosome Location chr6:87781015-87803663
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:87769000-87784000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr6:87779800-87781600 Enhancers Duodenum Mucosa Duodenum
3 chr6:87779800-87781600 Enhancers Fetal Intestine Large intestine
4 chr6:87779800-87785200 Enhancers Fetal Intestine Small intestine
5 chr6:87780400-87784000 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr6:87780600-87783600 Weak transcription Stomach Mucosa stomach
7 chr6:87780600-87784000 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr6:87781000-87781600 Bivalent Enhancer Small Intestine intestine
9 chr6:87781000-87783800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr6:87781600-87782400 Weak transcription Duodenum Mucosa Duodenum
11 chr6:87781600-87782800 Weak transcription Fetal Intestine Large intestine
12 chr6:87782400-87784400 Enhancers Duodenum Mucosa Duodenum
13 chr6:87782800-87785200 Enhancers Fetal Intestine Large intestine
14 chr6:87783400-87784200 Enhancers Pancreatic Islets Pancreatic Islet
15 chr6:87783600-87784400 Enhancers Stomach Mucosa stomach
16 chr6:87783800-87784400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr6:87784000-87784200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
18 chr6:87784000-87784400 Enhancers Rectal Mucosa Donor 31 rectum
19 chr6:87784000-87784400 Enhancers Sigmoid Colon Sigmoid Colon
20 chr6:87784000-87784400 Enhancers Small Intestine intestine
21 chr6:87784000-87784400 Enhancers HepG2 liver
22 chr6:87784000-87785200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr6:87784000-87785200 Enhancers Adipose Nuclei Adipose
24 chr6:87784000-87785400 Enhancers Rectal Mucosa Donor 29 rectum
25 chr6:87784200-87784400 Bivalent Enhancer H9 Derived Neuron Cultured Cells ES cell derived
26 chr6:87784400-87786400 Weak transcription Stomach Mucosa stomach
27 chr6:87784600-87785400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr6:87785200-87786600 Weak transcription Fetal Intestine Small intestine
29 chr6:87785200-87789000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr6:87786400-87786800 Enhancers Stomach Mucosa stomach
31 chr6:87786600-87786800 Enhancers Fetal Intestine Small intestine
32 chr6:87788600-87789200 Enhancers Brain Substantia Nigra brain
33 chr6:87788800-87789000 Enhancers GM12878-XiMat blood
34 chr6:87788800-87789400 Enhancers Primary neutrophils fromperipheralblood blood
35 chr6:87789000-87789200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr6:87789000-87789200 Enhancers Spleen Spleen
37 chr6:87789000-87790600 Weak transcription GM12878-XiMat blood
38 chr6:87790600-87793200 Enhancers GM12878-XiMat blood
39 chr6:87791600-87793200 Enhancers Primary B cells from peripheral blood blood
40 chr6:87792200-87794000 Weak transcription Placenta Placenta
41 chr6:87792800-87793000 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr6:87793000-87798200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
43 chr6:87793200-87797600 Weak transcription GM12878-XiMat blood
44 chr6:87794000-87799800 Strong transcription Placenta Placenta
45 chr6:87797600-87798200 Enhancers GM12878-XiMat blood
46 chr6:87799800-87801400 Weak transcription Placenta Placenta
47 chr6:87801400-87804800 Active TSS Placenta Placenta
48 chr6:87801400-87805000 Active TSS Hela-S3 cervix
49 chr6:87803000-87803800 Enhancers HMEC breast
50 chr6:87803000-87804000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --

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