Variant report

Variant	nsv541003
Chromosome Location	chr11:35122694-35261451
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:4058)
CpG islands
(count:2260)
Chromatin interactive
region (count:100)
LncRNA
region (count:31)
Mature miRNA
region (count: 0)
miRNA target
sites (count:9)

(count:4058 , 50 per page) page: 1 2 3 4 5 6 7 ... 82

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr11:35194753-35195096	HepG2	liver:	n/a	n/a
2	ARID3A	chr11:35212245-35212521	HepG2	liver:	n/a	n/a
3	ATF1	chr11:35125408-35125579	K562	blood:	n/a	n/a
4	ATF1	chr11:35164287-35164318	K562	blood:	n/a	n/a
5	ATF1	chr11:35133237-35133513	K562	blood:	n/a	n/a
6	ATF1	chr11:35168376-35168687	K562	blood:	n/a	n/a
7	ATF1	chr11:35122859-35123088	K562	blood:	n/a	n/a
8	ATF1	chr11:35132632-35132924	K562	blood:	n/a	n/a
9	ATF1	chr11:35162652-35162835	K562	blood:	n/a	n/a
10	ATF1	chr11:35257545-35257824	K562	blood:	n/a	n/a
11	ATF1	chr11:35166888-35167161	K562	blood:	n/a	n/a
12	ATF1	chr11:35258231-35258534	K562	blood:	n/a	n/a
13	ATF1	chr11:35182060-35182303	K562	blood:	n/a	n/a
14	ATF2	chr11:35140337-35140923	GM12878	blood:	n/a	n/a
15	ATF2	chr11:35152590-35153181	GM12878	blood:	n/a	n/a
16	ATF2	chr11:35208765-35209181	GM12878	blood:	n/a	n/a
17	ATF2	chr11:35167580-35168640	GM12878	blood:	n/a	n/a
18	ATF2	chr11:35167420-35168628	GM12878	blood:	n/a	n/a
19	ATF2	chr11:35187309-35188167	GM12878	blood:	n/a	n/a
20	ATF2	chr11:35166629-35167313	GM12878	blood:	n/a	n/a
21	ATF2	chr11:35166448-35167418	GM12878	blood:	n/a	n/a
22	ATF2	chr11:35147513-35148569	GM12878	blood:	n/a	n/a
23	ATF2	chr11:35140329-35140826	GM12878	blood:	n/a	n/a
24	ATF2	chr11:35148675-35149703	GM12878	blood:	n/a	n/a
25	ATF2	chr11:35147745-35149600	GM12878	blood:	n/a	n/a
26	ATF2	chr11:35143863-35144425	GM12878	blood:	n/a	n/a
27	ATF2	chr11:35165372-35166426	GM12878	blood:	n/a	n/a
28	ATF2	chr11:35187310-35187972	GM12878	blood:	n/a	n/a
29	ATF2	chr11:35165624-35166332	GM12878	blood:	n/a	n/a
30	ATF3	chr11:35176584-35176795	K562	blood:	n/a	n/a
31	ATF3	chr11:35188083-35188607	A549	lung:	n/a	n/a
32	BACH1	chr11:35237805-35237836	K562	blood:	n/a	n/a
33	BACH1	chr11:35173481-35173712	H1-hESC	embryonic stem cell:	n/a	n/a
34	BACH1	chr11:35202998-35203161	K562	blood:	n/a	n/a
35	BATF	chr11:35147860-35149081	GM12878	blood:	n/a	n/a
36	BATF	chr11:35165661-35166245	GM12878	blood:	n/a	chr11:35165967-35165978
37	BATF	chr11:35148056-35148539	GM12878	blood:	n/a	n/a
38	BATF	chr11:35152651-35153096	GM12878	blood:	n/a	n/a
39	BATF	chr11:35166776-35167203	GM12878	blood:	n/a	n/a
40	BATF	chr11:35149191-35149488	GM12878	blood:	n/a	n/a
41	BATF	chr11:35168289-35168641	GM12878	blood:	n/a	chr11:35168501-35168512 chr11:35168502-35168512
42	BATF	chr11:35167579-35168080	GM12878	blood:	n/a	chr11:35167751-35167761 chr11:35167750-35167761 chr11:35167875-35167884
43	BATF	chr11:35140450-35140835	GM12878	blood:	n/a	n/a
44	BATF	chr11:35208829-35209017	GM12878	blood:	n/a	chr11:35208842-35208853
45	BATF	chr11:35193580-35193816	GM12878	blood:	n/a	n/a
46	BATF	chr11:35208723-35209029	GM12878	blood:	n/a	chr11:35208842-35208853
47	BATF	chr11:35156814-35157149	GM12878	blood:	n/a	n/a
48	BATF	chr11:35167514-35168067	GM12878	blood:	n/a	chr11:35167751-35167761 chr11:35167750-35167761 chr11:35167875-35167884
49	BATF	chr11:35140438-35140826	GM12878	blood:	n/a	n/a
50	BATF	chr11:35157164-35157464	GM12878	blood:	n/a	chr11:35157283-35157294 chr11:35157313-35157324 chr11:35157314-35157324

(count:2260 , 50 per page) page: 1 2 3 4 5 6 7 ... 46

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:35159087-35159137	GM19239	blood:	n/a
2	chr11:35253243-35253293	Caco-2	colon:	n/a
3	chr11:35164485-35164535	HEK293	kidney:	embryo
4	chr11:35159087-35159137	GM19239	blood:	n/a
5	chr11:35253243-35253293	Caco-2	colon:	n/a
6	chr11:35164485-35164535	HEK293	kidney:	embryo
7	chr11:35253243-35253293	NHDF-neo	bronchial:	n/a
8	chr11:35160498-35160548	NB4	blood:	n/a
9	chr11:35243965-35244015	H1-hESC	embryonic stem cell:	embryo
10	chr11:35159382-35159432	PrEC	prostate:	n/a
11	chr11:35173592-35173642	U87	brain:	n/a
12	chr11:35160892-35160942	SK-N-SH	brain:	n/a
13	chr11:35160571-35160621	NHBE	bronchial:	n/a
14	chr11:35229448-35229498	SK-N-MC	brain:	n/a
15	chr11:35249965-35250015	HNPCEpiC	eye:	n/a
16	chr11:35161900-35161950	K562	blood:	n/a
17	chr11:35188437-35188487	HAEpiC	amniotic membrane:	n/a
18	chr11:35159382-35159432	PFSK-1	brain:	n/a
19	chr11:35138084-35138134	MCF10A-Er-Src	breast:	n/a
20	chr11:35229448-35229498	SKMC	muscle:	n/a
21	chr11:35161229-35161279	GM12878	blood:	n/a
22	chr11:35159087-35159137	HCF	heart:	n/a
23	chr11:35258604-35258654	HNPCEpiC	eye:	n/a
24	chr11:35249965-35250015	Caco-2	colon:	n/a
25	chr11:35159136-35159186	HPAEpiC	pulmonary alveolar:	n/a
26	chr11:35159382-35159432	HCT-116	colon:	n/a
27	chr11:35195513-35195563	SK-N-MC	brain:	n/a
28	chr11:35249965-35250015	SK-N-SH_RA	brain:	n/a
29	chr11:35159087-35159137	HAEpiC	amniotic membrane:	n/a
30	chr11:35186440-35186490	HCM	heart:	n/a
31	chr11:35228261-35228311	GM12891	blood:	n/a
32	chr11:35201133-35201183	AG10803	skin:	n/a
33	chr11:35160462-35160512	K562	blood:	n/a
34	chr11:35158283-35158333	BE2_C	brain:	n/a
35	chr11:35243965-35244015	AG10803	skin:	n/a
36	chr11:35179802-35179852	PrEC	prostate:	n/a
37	chr11:35160843-35160893	SK-N-SH	brain:	n/a
38	chr11:35159136-35159186	ProgFib	skin:	n/a
39	chr11:35161345-35161395	RPTEC	kidney:	n/a
40	chr11:35253154-35253204	PFSK-1	brain:	n/a
41	chr11:35158283-35158333	HRE	kidney:	n/a
42	chr11:35160330-35160380	NHDF-neo	bronchial:	n/a
43	chr11:35173592-35173642	HEEpiC	esophagus:	n/a
44	chr11:35237158-35237208	SKMC	muscle:	n/a
45	chr11:35253154-35253204	SK-N-MC	brain:	n/a
46	chr11:35237158-35237208	NHDF-neo	bronchial:	n/a
47	chr11:35253154-35253204	MCF10A-Er-Src	breast:	n/a
48	chr11:35133274-35133324	MCF10A-Er-Src	breast:	n/a
49	chr11:35243965-35244015	NHDF-neo	bronchial:	n/a
50	chr11:35160330-35160380	AG04450	lung:	fetal

(count:100 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr11:35184295..35186190-chr11:35191742..35193747,2	MCF-7	breast:
2	chr11:35227871..35230257-chr11:35238452..35241345,2	MCF-7	breast:
3	chr11:35155392..35158105-chr11:35159031..35160697,2	MCF-7	breast:
4	chr11:35160960..35162794-chr11:35186248..35188654,2	MCF-7	breast:
5	chr11:35208296..35211320-chr11:35214358..35217497,3	K562	blood:
6	chr11:35121360..35123846-chr11:35132606..35135309,2	K562	blood:
7	chr11:35132300..35135003-chr11:35146023..35147940,2	MCF-7	breast:
8	chr11:35251288..35252930-chr11:35253929..35256719,2	K562	blood:
9	chr11:35132300..35135003-chr11:35146023..35147940,2	MCF-7	breast:
10	chr11:35187046..35189640-chr11:35384110..35385949,2	MCF-7	breast:
11	chr11:35160872..35161372-chr12:14923610..14924453,2	Hela-S3	cervix:
12	chr11:35135735..35137455-chr11:35149991..35152217,2	K562	blood:
13	chr11:35160960..35162794-chr11:35186248..35188654,2	MCF-7	breast:
14	chr11:35163163..35167316-chr11:35171190..35174236,4	K562	blood:
15	chr11:35143665..35146006-chr11:35146722..35148953,2	MCF-7	breast:
16	chr11:35208907..35210567-chr11:35212909..35215234,2	MCF-7	breast:
17	chr11:35123473..35125204-chr11:35129634..35132229,2	MCF-7	breast:
18	chr11:35172301..35174738-chr11:35189496..35192114,2	MCF-7	breast:
19	chr11:35143665..35146006-chr11:35146722..35148953,2	MCF-7	breast:
20	chr11:35241455..35243081-chr11:35243204..35244959,2	MCF-7	breast:
21	chr11:35253382..35256369-chr11:35263187..35265388,2	K562	blood:
22	chr11:35123609..35125478-chr11:35160638..35163395,2	MCF-7	breast:
23	chr1:89149746..89150285-chr11:35160701..35161440,2	HCT-116	colon:
24	chr11:35137747..35140053-chr11:35157394..35160229,2	MCF-7	breast:
25	chr11:35198118..35199850-chr11:35204330..35207060,2	K562	blood:
26	chr11:35188706..35190323-chr11:35204261..35206876,2	K562	blood:
27	chr1:207503349..207504173-chr11:35160887..35161695,2	Hela-S3	cervix:
28	chr11:35159898..35160664-chr9:96928460..96928999,2	Hela-S3	cervix:
29	chr11:35160366..35160877-chr15:44069390..44069929,2	Hela-S3	cervix:
30	chr11:35183121..35185456-chr11:35188061..35190243,2	MCF-7	breast:
31	chr11:35186608..35189447-chr11:35199235..35201624,2	MCF-7	breast:
32	chr11:35237824..35241219-chr11:35241266..35244323,3	K562	blood:
33	chr11:35166380..35169022-chr11:35170596..35172915,2	MCF-7	breast:
34	chr11:34961886..34962391-chr11:35259545..35260066,2	MCF-7	breast:
35	chr11:35121360..35123846-chr11:35132606..35135309,2	K562	blood:
36	chr11:35169325..35170963-chr11:35175287..35177044,2	K562	blood:
37	chr1:154154871..154155752-chr11:35160501..35161403,2	Hela-S3	cervix:
38	chr11:35186608..35189447-chr11:35199235..35201624,2	MCF-7	breast:
39	chr11:35160324..35161311-chr3:14444116..14444878,2	Hela-S3	cervix:
40	chr11:35199491..35202638-chr11:35207456..35210593,3	MCF-7	breast:
41	chr11:35122584..35124925-chr11:35126765..35129371,2	MCF-7	breast:
42	chr11:35251288..35252930-chr11:35253929..35256719,2	K562	blood:
43	chr11:35258928..35261277-chr11:35264057..35266573,2	K562	blood:
44	chr11:35258018..35260931-chr11:35412299..35415204,2	MCF-7	breast:
45	chr11:35260075..35262709-chr11:35271623..35274355,2	K562	blood:
46	chr11:35059235..35060888-chr11:35161011..35163300,2	MCF-7	breast:
47	chr11:35160584..35161366-chr17:72983348..72984211,2	Hela-S3	cervix:
48	chr11:35169325..35170963-chr11:35175287..35177044,2	K562	blood:
49	chr11:35241455..35243081-chr11:35243204..35244959,2	MCF-7	breast:
50	chr11:35121498..35123460-chr11:35254836..35257289,2	K562	blood:

(count:31 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-SLC1A2-4	chr11:35254171-35254874	NONHSAT018787
2	lnc-SLC1A2-4	chr11:35254902-35256403	NONHSAT018787
3	lnc-PDHX-5	chr11:35243201-35243263	NONHSAT018782
4	lnc-SLC1A2-2	chr11:35157893-35158084	XLOC_009416
5	lnc-PDHX-1	chr11:35234097-35234396	ENSG00000251194
6	lnc-PDHX-5	chr11:35226059-35226187	NONHSAT018781
7	lnc-PDHX-5	chr11:35223168-35223334	NONHSAT018782
8	lnc-SLC1A2-2	chr11:35157781-35158173	ENSG00000255521.1
9	lnc-SLC1A2-1	chr11:35236378-35236532	ENSG00000255443.1
10	lnc-PDHX-5	chr11:35232793-35232996	NONHSAT018782
11	lnc-SLC1A2-1	chr11:35231890-35232321	ENSG00000255443.1
12	lnc-CD44-4	chr11:35124735-35124991	NONHSAT018773
13	lnc-CD44-3	chr11:35132621-35132927	NONHSAT018774
14	lnc-PDHX-5	chr11:35240863-35240934	NONHSAT018782
15	lnc-PDHX-5	chr11:35227262-35227790	NONHSAT018783
16	lnc-PDHX-3	chr11:35140600-35142723	NONHSAT018772
17	lnc-PDHX-5	chr11:35211473-35211612	NONHSAT018779
18	lnc-SLC1A2-2	chr11:35150431-35150467	XLOC_009416
19	lnc-SLC1A2-2	chr11:35159245-35159579	ENSG00000255521.1
20	lnc-PDHX-5	chr11:35226059-35226358	NONHSAT018779
21	lnc-PDHX-5	chr11:35223215-35223334	NONHSAT018781
22	lnc-PDHX-5	chr11:35227332-35227594	NONHSAT018781
23	lnc-SLC1A2-2	chr11:35154202-35154687	ENSG00000255521.1
24	lnc-PDHX-5	chr11:35229652-35229711	NONHSAT018783
25	lnc-PDHX-1	chr11:35235151-35235554	ENSG00000251194
26	lnc-SLC1A2-2	chr11:35159245-35159273	ENSG00000255521.1
27	lnc-PDHX-4	chr11:35218709-35219340	NONHSAT018780
28	lnc-SLC1A2-2	chr11:35157893-35158173	ENSG00000255521.1
29	lnc-PDHX-5	chr11:35222691-35222742	NONHSAT018781
30	lnc-PDHX-4	chr11:35219416-35220102	NONHSAT018780
31	lnc-PDHX-5	chr11:35236399-35236461	NONHSAT018782

No data

(count:9 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location
1	CD44	hsa-miR-708-5p	chr11:35252486-35252508
2	CD44	hsa-miR-520c-3p	chr11:35253896-35253903
3	CD44	hsa-miR-373-3p	chr11:35253896-35253903
4	CD44	hsa-miR-328-3p	chr11:35251070-35251091
5	CD44	hsa-miR-520c-3p	chr11:35253881-35253903
6	CD44	hsa-miR-373-3p	chr11:35253880-35253903
7	CD44	hsa-miR-373-3p	chr11:35211492-35211514
8	CD44	hsa-miR-216a-5p	chr11:35253535-35253556
9	CD44	hsa-miR-520c-3p	chr11:35211491-35211514

Variant related genes	Relation type
ENSG00000255443	TF binding region
ENSG00000269766	TF binding region
CD44	TF binding region
ENSG00000251194	TF binding region
ENSG00000255521	TF binding region
ENSG00000255443	CpG island
ENSG00000269766	CpG island
CD44	CpG island
ENSG00000251194	CpG island
ENSG00000255521	CpG island
ENSG00000026508	chromatin interactions
ENSG00000255521	chromatin interactions
ENSG00000177971	chromatin interactions
ENSG00000160813	chromatin interactions
ENSG00000269946	chromatin interactions
ENSG00000128886	chromatin interactions
ENSG00000269766	chromatin interactions
ENSG00000119408	chromatin interactions
ENSG00000271853	chromatin interactions
ENSG00000143549	chromatin interactions
ENSG00000199347	chromatin interactions
ENSG00000065243	chromatin interactions
ENSG00000272030	chromatin interactions
ENSG00000109089	chromatin interactions
ENSG00000197837	chromatin interactions
ENSG00000131389	chromatin interactions
ENSG00000223247	chromatin interactions
ENSG00000120129	chromatin interactions
ENSG00000110435	chromatin interactions
ENSG00000160741	chromatin interactions
ENSG00000125459	chromatin interactions
ENSG00000232519	chromatin interactions
ENSG00000255443	chromatin interactions
POU2F1	miRNA target sites
GLCE	miRNA target sites

Extended variants
information (count: 5659 )
Associated
traits (count: 83 )

Variant overlapped rSNPs/rCNVs (count:5659 , 50 per page) page: 1 2 3 4 5 6 7 ... 114

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs376982705	chr11:35122724-35122725	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs146805023	chr11:35122747-35122748	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs555226523	chr11:35122789-35122790	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs78027096	chr11:35122825-35122826	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs561366493	chr11:35122845-35122846	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs12284010	chr11:35122865-35122866	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs573957913	chr11:35122906-35122907	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs577216400	chr11:35122914-35122915	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs545266839	chr11:35122935-35122936	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs77873480	chr11:35122936-35122937	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs560075764	chr11:35122972-35122973	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs111880784	chr11:35122998-35122999	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs75676305	chr11:35123000-35123001	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs540780843	chr11:35123016-35123017	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs1559759	chr11:35123051-35123052	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	disease
16	rs142944066	chr11:35123065-35123066	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs543198588	chr11:35123082-35123083	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs563271116	chr11:35123088-35123089	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs532044237	chr11:35123129-35123130	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs552215625	chr11:35123136-35123137	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs566350690	chr11:35123146-35123147	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs151085283	chr11:35123172-35123173	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs548761757	chr11:35123184-35123185	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs1559758	chr11:35123195-35123196	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
25	rs191562180	chr11:35123221-35123222	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs141113088	chr11:35123233-35123234	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs375860645	chr11:35123271-35123272	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs146896291	chr11:35123291-35123292	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs79899372	chr11:35123323-35123324	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs552951745	chr11:35123325-35123326	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs571968007	chr11:35123326-35123327	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs76310144	chr11:35123357-35123358	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs554339265	chr11:35123361-35123362	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs574572068	chr11:35123406-35123407	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs117226249	chr11:35123454-35123455	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs550975699	chr11:35123478-35123479	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs571869873	chr11:35123492-35123493	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs138672972	chr11:35123515-35123516	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs541782894	chr11:35123525-35123526	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs114121740	chr11:35123538-35123539	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs182625046	chr11:35123541-35123542	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs143847764	chr11:35123544-35123545	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs371117068	chr11:35123548-35123549	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs186601748	chr11:35123551-35123552	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs353586	chr11:35123574-35123575	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
46	rs114035850	chr11:35123581-35123582	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs568618675	chr11:35123598-35123599	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs531047181	chr11:35123652-35123653	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs141078054	chr11:35123689-35123690	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs570829522	chr11:35123692-35123693	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:83)

Disease	PMID	Source
Breast cancer	17603634	CNVD
Medulloblastoma	21979893	CNVD
Thyroid cancer	19087340	CNVD
Melanoma	18172304	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Wilms tumour	21544195	CNVD
Parathyroid adenoma	22454399	CNVD
Chordoma	21602918	CNVD
Breast cancer	21949216	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	19222835	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Beckwith-Wiedemann syndrome	21518781	CNVD
Wilms tumour	21518781	CNVD
Hepatoblastoma	21518781	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Gastric cancer	17908304	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Multiple myeloma	20724749	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Autism	22495311	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	21785460	CNVD
Medulloblastoma	16783165	CNVD
small cell lung cancer	20016488	CNVD
Renal cell carcinoma	18194544	CNVD
Potocki-Shaffer syndrome	19222835	CNVD
WAGR syndrome	19222835	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Glioblastoma multiforme	22286061	CNVD
Breast cancer	21364760	CNVD
Aniridia syndrome	21572526	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	16272173	CNVD
Retinoblastoma	22278416	CNVD
Denys-drash syndrome	21085971	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
WAGR syndrome	16773131	CNVD
Disorders of sex development	22290220	CNVD
Aniridia syndrome	17204608	CNVD
Mental retardation	17204608	CNVD
WAGR syndrome	19617690	CNVD
genitourinary abnormalities	17204608	CNVD
Breast cancer	16397240	CNVD
Mental retardation	16773131	CNVD
Multiple myeloma	16616336	CNVD
Cancer	17160897	CNVD
Cancer	21183584	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
WAGR syndrome	22470819	CNVD
Neurodevelopmental disorder	22521361	CNVD
Denys-drash syndrome	19566914	CNVD
Familial wilms tumor	19566914	CNVD
Frasier syndrome	19566914	CNVD
Non-small cell lung cancer	21829676	CNVD
WAGR syndrome	20603712	CNVD
Autism	17322880	CNVD
Renal cell carcinoma	18765545	CNVD
Breast cancer	21858162	CNVD
Cancer	20164920	CNVD
Breast cancer	16620391	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Lung squamous cell carcinoma	20842114	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:5171 , 50 per page) page: 1 2 3 4 5 6 7 ... 104

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:35110400-35124000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr11:35118400-35124600	Enhancers	Colon Smooth Muscle	Colon
3	chr11:35118600-35124000	Enhancers	Adipose Nuclei	Adipose
4	chr11:35118600-35125200	Enhancers	Stomach Smooth Muscle	stomach
5	chr11:35119400-35123000	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
6	chr11:35119400-35123400	Enhancers	NHDF-Ad	bronchial
7	chr11:35119400-35124600	Enhancers	Fetal Stomach	stomach
8	chr11:35119400-35125400	Enhancers	Fetal Muscle Leg	muscle
9	chr11:35119400-35127200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
10	chr11:35119600-35122800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
11	chr11:35119600-35123000	Enhancers	NHLF	lung
12	chr11:35119600-35123200	Enhancers	Aorta	Aorta
13	chr11:35119600-35123400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr11:35119600-35124400	Enhancers	Rectal Smooth Muscle	rectum
15	chr11:35119600-35126400	Weak transcription	Primary T helper cells PMA-I stimulated	--
16	chr11:35119800-35123000	Enhancers	Skeletal Muscle Male	skeletal muscle
17	chr11:35120400-35123000	Enhancers	Muscle Satellite Cultured Cells	--
18	chr11:35120400-35123000	Enhancers	Osteobl	bone
19	chr11:35120800-35126800	Weak transcription	Left Ventricle	heart
20	chr11:35121200-35125000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
21	chr11:35121400-35126200	Weak transcription	K562	blood
22	chr11:35121400-35127000	Weak transcription	Right Atrium	heart
23	chr11:35121600-35123400	Weak transcription	Duodenum Smooth Muscle	Duodenum
24	chr11:35121600-35123600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
25	chr11:35121600-35124800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
26	chr11:35121800-35124800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
27	chr11:35121800-35124800	Weak transcription	HMEC	breast
28	chr11:35121800-35125000	Weak transcription	NHEK	skin
29	chr11:35122000-35123000	Enhancers	Skeletal Muscle Female	skeletal muscle
30	chr11:35122200-35123000	Enhancers	Lung	lung
31	chr11:35122200-35127400	Enhancers	HSMMtube	muscle
32	chr11:35122400-35124800	Weak transcription	HSMM	muscle
33	chr11:35122400-35124800	Weak transcription	NH-A	brain
34	chr11:35122400-35125000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
35	chr11:35122400-35126800	Weak transcription	Fetal Muscle Trunk	muscle
36	chr11:35122400-35127000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
37	chr11:35122400-35132600	Weak transcription	Right Ventricle	heart
38	chr11:35122600-35125200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
39	chr11:35122800-35123600	Weak transcription	Rectal Mucosa Donor 31	rectum
40	chr11:35123000-35124000	Weak transcription	NHLF	lung
41	chr11:35123000-35125000	Weak transcription	Osteobl	bone
42	chr11:35123000-35125400	Weak transcription	Muscle Satellite Cultured Cells	--
43	chr11:35123000-35132200	Weak transcription	Lung	lung
44	chr11:35123000-35132600	Weak transcription	Skeletal Muscle Male	skeletal muscle
45	chr11:35123000-35132600	Weak transcription	Skeletal Muscle Female	skeletal muscle
46	chr11:35123200-35125000	Weak transcription	Aorta	Aorta
47	chr11:35123400-35124400	Enhancers	Duodenum Smooth Muscle	Duodenum
48	chr11:35123400-35126400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
49	chr11:35123400-35126600	Weak transcription	NHDF-Ad	bronchial
50	chr11:35123600-35126800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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