No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs6671633 |
chr1:45500294-45500295 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
2 |
rs187806580 |
chr1:45500317-45500318 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs536099598 |
chr1:45500381-45500382 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs549665435 |
chr1:45500391-45500392 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs116506980 |
chr1:45500403-45500404 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs141533923 |
chr1:45500434-45500435 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs12043559 |
chr1:45500466-45500467 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs558604580 |
chr1:45500479-45500480 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs552243798 |
chr1:45500539-45500540 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs78184567 |
chr1:45500553-45500554 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs373997982 |
chr1:45500556-45500557 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs151057084 |
chr1:45500557-45500558 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs574489185 |
chr1:45500647-45500648 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs543316646 |
chr1:45500652-45500653 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs12047556 |
chr1:45500665-45500666 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
16 |
rs113438923 |
chr1:45500675-45500676 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs372841651 |
chr1:45500708-45500709 |
Weak transcription Strong transcription
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs193148926 |
chr1:45500761-45500762 |
Weak transcription Strong transcription
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs565379097 |
chr1:45500842-45500843 |
Strong transcription Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs12409676 |
chr1:45500908-45500909 |
Strong transcription Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs527824635 |
chr1:45501002-45501003 |
Strong transcription Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs573410026 |
chr1:45501005-45501006 |
Strong transcription Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs545155808 |
chr1:45501013-45501014 |
Strong transcription Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs370147639 |
chr1:45501024-45501025 |
Strong transcription Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs150235965 |
chr1:45501041-45501042 |
Strong transcription Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs183244203 |
chr1:45501074-45501075 |
Strong transcription Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs34814510 |
chr1:45501091-45501092 |
Strong transcription Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs530057075 |
chr1:45501178-45501179 |
Strong transcription Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs565346268 |
chr1:45501191-45501192 |
Strong transcription Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs549626691 |
chr1:45501206-45501207 |
Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs569646038 |
chr1:45501231-45501232 |
Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs187562517 |
chr1:45501245-45501246 |
Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs112879989 |
chr1:45501246-45501247 |
Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs560448958 |
chr1:45501279-45501280 |
Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs199979191 |
chr1:45501296-45501297 |
Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs138902614 |
chr1:45501325-45501326 |
Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs534379315 |
chr1:45501326-45501327 |
Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs201182804 |
chr1:45501334-45501335 |
Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs377635919 |
chr1:45501335-45501336 |
Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs370874222 |
chr1:45501344-45501345 |
Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs568027451 |
chr1:45501351-45501352 |
Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs202174580 |
chr1:45501379-45501380 |
Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs140690848 |
chr1:45501389-45501390 |
Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs568026294 |
chr1:45501459-45501460 |
Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs200273650 |
chr1:45501460-45501461 |
Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs199737437 |
chr1:45501473-45501474 |
Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs371031471 |
chr1:45501507-45501508 |
Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs537079715 |
chr1:45501545-45501546 |
Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs556875321 |
chr1:45501622-45501623 |
Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs115244315 |
chr1:45501655-45501656 |
Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|