Variant report

Variant nsv546148
Chromosome Location chr1:45500294-45627663
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:669 , 50 per page) page: 1 2 3 4 5 6 7 ... 14
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:45480800-45500600 Weak transcription HepG2 liver
2 chr1:45480800-45501200 Weak transcription Fetal Brain Male brain
3 chr1:45480800-45510400 Weak transcription Colon Smooth Muscle Colon
4 chr1:45481200-45504600 Weak transcription Colonic Mucosa Colon
5 chr1:45481200-45510200 Weak transcription Lung lung
6 chr1:45481200-45525000 Weak transcription Rectal Smooth Muscle rectum
7 chr1:45481200-45527400 Weak transcription Left Ventricle heart
8 chr1:45482000-45523800 Weak transcription Cortex derived primary cultured neurospheres brain
9 chr1:45485800-45501400 Weak transcription Ovary ovary
10 chr1:45491800-45516400 Weak transcription Spleen Spleen
11 chr1:45492000-45507600 Weak transcription Pancreatic Islets Pancreatic Islet
12 chr1:45494600-45504200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr1:45495000-45506800 Weak transcription Skeletal Muscle Male skeletal muscle
14 chr1:45497400-45525400 Weak transcription Gastric stomach
15 chr1:45497800-45501000 Weak transcription Primary T helper cells fromperipheralblood blood
16 chr1:45497800-45501800 Strong transcription Breast Myoepithelial Primary Cells Breast
17 chr1:45498000-45525600 Weak transcription Pancreas Pancrea
18 chr1:45498200-45506800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr1:45498600-45502000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
20 chr1:45499200-45502000 Strong transcription Brain Anterior Caudate brain
21 chr1:45499200-45502000 Strong transcription Brain Germinal Matrix brain
22 chr1:45499200-45502000 Strong transcription Brain Inferior Temporal Lobe brain
23 chr1:45499200-45502400 Strong transcription Stomach Smooth Muscle stomach
24 chr1:45499200-45516200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
25 chr1:45499400-45500400 Strong transcription Sigmoid Colon Sigmoid Colon
26 chr1:45499400-45501200 Strong transcription Fetal Intestine Small intestine
27 chr1:45499400-45501400 Weak transcription Skeletal Muscle Female skeletal muscle
28 chr1:45499400-45502000 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
29 chr1:45499400-45502400 Weak transcription Hela-S3 cervix
30 chr1:45499600-45503200 Weak transcription GM12878-XiMat blood
31 chr1:45499800-45501800 Strong transcription Brain Hippocampus Middle brain
32 chr1:45499800-45501800 Strong transcription Brain Substantia Nigra brain
33 chr1:45499800-45502000 Strong transcription Brain Angular Gyrus brain
34 chr1:45499800-45502000 Strong transcription Brain Cingulate Gyrus brain
35 chr1:45499800-45502000 Strong transcription Fetal Adrenal Gland Adrenal Gland
36 chr1:45499800-45502000 Strong transcription Fetal Brain Female brain
37 chr1:45499800-45502000 Strong transcription Rectal Mucosa Donor 29 rectum
38 chr1:45499800-45502600 Strong transcription Fetal Stomach stomach
39 chr1:45500000-45502000 Strong transcription Duodenum Smooth Muscle Duodenum
40 chr1:45500000-45502000 Strong transcription Rectal Mucosa Donor 31 rectum
41 chr1:45500000-45504800 Weak transcription Primary T cells fromperipheralblood blood
42 chr1:45500200-45500400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
43 chr1:45500200-45501000 Weak transcription Aorta Aorta
44 chr1:45500200-45501200 Weak transcription Duodenum Mucosa Duodenum
45 chr1:45500200-45501600 Weak transcription Fetal Intestine Large intestine
46 chr1:45500400-45500800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
47 chr1:45500400-45505200 Weak transcription Right Ventricle heart
48 chr1:45500400-45516600 Weak transcription Sigmoid Colon Sigmoid Colon
49 chr1:45500600-45502000 Strong transcription HepG2 liver
50 chr1:45500800-45501200 Enhancers K562 blood

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