No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs4148900 |
chr11:45673014-45673015 |
Weak transcription Enhancers Strong transcription
|
lncRNA
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
2 |
rs536310135 |
chr11:45673059-45673060 |
Weak transcription Enhancers Strong transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
3 |
rs552913382 |
chr11:45673093-45673094 |
Weak transcription Enhancers Strong transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
4 |
rs573021892 |
chr11:45673184-45673185 |
Weak transcription Enhancers Strong transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
5 |
rs544861343 |
chr11:45673219-45673220 |
Weak transcription Enhancers Strong transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
6 |
rs558464057 |
chr11:45673239-45673240 |
Weak transcription Enhancers Strong transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
7 |
rs575180492 |
chr11:45673280-45673281 |
Weak transcription Enhancers Strong transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
8 |
rs559240107 |
chr11:45673300-45673301 |
Weak transcription Enhancers Strong transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
9 |
rs561994722 |
chr11:45673371-45673372 |
Weak transcription Enhancers Strong transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
10 |
rs144849349 |
chr11:45673372-45673373 |
Weak transcription Enhancers Strong transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
11 |
rs369918656 |
chr11:45673410-45673411 |
Weak transcription Enhancers Strong transcription Bivalent Enhancer
|
CpG islandlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs530151721 |
chr11:45673411-45673412 |
Weak transcription Enhancers Strong transcription Bivalent Enhancer
|
CpG islandlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs540697229 |
chr11:45673421-45673422 |
Weak transcription Enhancers Strong transcription Bivalent Enhancer
|
CpG islandlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs560364549 |
chr11:45673422-45673423 |
Weak transcription Enhancers Strong transcription Bivalent Enhancer
|
CpG islandlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs45604634 |
chr11:45673446-45673447 |
Weak transcription Enhancers Strong transcription Bivalent Enhancer
|
CpG islandlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs45533136 |
chr11:45673493-45673494 |
Weak transcription Enhancers Strong transcription Bivalent Enhancer
|
lncRNA
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
17 |
rs569571514 |
chr11:45673620-45673621 |
Enhancers Weak transcription Genic enhancers Strong transcription Bivalent Enhancer
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
18 |
rs532000717 |
chr11:45673664-45673665 |
Enhancers Weak transcription Genic enhancers Strong transcription Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
19 |
rs71451614 |
chr11:45673699-45673700 |
Enhancers Weak transcription Genic enhancers Strong transcription Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
20 |
rs71451615 |
chr11:45673704-45673705 |
Enhancers Weak transcription Genic enhancers Strong transcription Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
21 |
rs550609174 |
chr11:45673731-45673732 |
Enhancers Weak transcription Genic enhancers Strong transcription Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
22 |
rs376554519 |
chr11:45673794-45673795 |
Enhancers Weak transcription Genic enhancers Strong transcription Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
23 |
rs45560037 |
chr11:45673957-45673958 |
Enhancers Weak transcription Genic enhancers Strong transcription Bivalent Enhancer Bivalent/Poised TSS
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
24 |
rs35254532 |
chr11:45674019-45674020 |
Enhancers Weak transcription Strong transcription Bivalent Enhancer Bivalent/Poised TSS
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
25 |
rs553067425 |
chr11:45674020-45674021 |
Enhancers Weak transcription Strong transcription Bivalent Enhancer Bivalent/Poised TSS
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
26 |
rs138003314 |
chr11:45674062-45674063 |
Enhancers Weak transcription Strong transcription Bivalent Enhancer Bivalent/Poised TSS
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
27 |
rs543396238 |
chr11:45674063-45674064 |
Enhancers Weak transcription Strong transcription Bivalent Enhancer Bivalent/Poised TSS
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
28 |
rs538874903 |
chr11:45674065-45674066 |
Enhancers Weak transcription Strong transcription Bivalent Enhancer Bivalent/Poised TSS
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
29 |
rs558285192 |
chr11:45674085-45674086 |
Enhancers Weak transcription Strong transcription Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs575183807 |
chr11:45674099-45674100 |
Enhancers Weak transcription Strong transcription Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs544069621 |
chr11:45674100-45674101 |
Enhancers Weak transcription Strong transcription Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs2277272 |
chr11:45674170-45674171 |
Enhancers Weak transcription Strong transcription Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionlncRNA
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
33 |
rs573376847 |
chr11:45674201-45674202 |
Enhancers Weak transcription Bivalent Enhancer Genic enhancers Strong transcription
|
TF binding regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs574807805 |
chr11:45674212-45674213 |
Enhancers Weak transcription Bivalent Enhancer Genic enhancers Strong transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
35 |
rs4148899 |
chr11:45674266-45674267 |
Enhancers Weak transcription Bivalent Enhancer Genic enhancers Strong transcription
|
TF binding regionCpG islandlncRNA
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
36 |
rs45457491 |
chr11:45674348-45674349 |
Enhancers Weak transcription Bivalent Enhancer Genic enhancers Strong transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
37 |
rs45480804 |
chr11:45674387-45674388 |
Enhancers Weak transcription Bivalent Enhancer Genic enhancers Strong transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
38 |
rs149483276 |
chr11:45674393-45674394 |
Enhancers Weak transcription Bivalent Enhancer Genic enhancers Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
39 |
rs147517520 |
chr11:45674482-45674483 |
Enhancers Weak transcription Bivalent Enhancer Genic enhancers Strong transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs559036091 |
chr11:45674511-45674512 |
Enhancers Weak transcription Bivalent Enhancer Genic enhancers Strong transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs563035736 |
chr11:45674538-45674539 |
Enhancers Weak transcription Bivalent Enhancer Genic enhancers Strong transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs532065239 |
chr11:45674557-45674558 |
Enhancers Weak transcription Bivalent Enhancer Genic enhancers Strong transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs45535741 |
chr11:45674580-45674581 |
Enhancers Weak transcription Bivalent Enhancer Genic enhancers Strong transcription
|
TF binding region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
44 |
rs562353744 |
chr11:45674583-45674584 |
Enhancers Weak transcription Bivalent Enhancer Genic enhancers Strong transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs4148898 |
chr11:45674599-45674600 |
Enhancers Weak transcription Bivalent Enhancer Genic enhancers Strong transcription
|
TF binding region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
46 |
rs376335980 |
chr11:45674647-45674648 |
Weak transcription Enhancers Genic enhancers Strong transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs372225694 |
chr11:45674681-45674682 |
Weak transcription Enhancers Genic enhancers Strong transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs566566112 |
chr11:45674703-45674704 |
Weak transcription Enhancers Genic enhancers Strong transcription
|
TF binding regionCpG island
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs538316802 |
chr11:45674713-45674714 |
Weak transcription Enhancers Genic enhancers Strong transcription
|
TF binding regionCpG island
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs201164593 |
chr11:45674729-45674730 |
Weak transcription Enhancers Genic enhancers Strong transcription
|
TF binding regionCpG island
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|