Variant report

Variant	nsv555224
Chromosome Location	chr11:66234023-66296114
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2558)
CpG islands
(count:2505)
Chromatin interactive
region (count:127)
LncRNA
region (count:19)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2558 , 50 per page) page: 1 2 3 4 5 6 7 ... 52

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr11:66276802-66276962	HepG2	liver:	n/a	n/a
2	ARID3A	chr11:66247656-66248510	K562	blood:	n/a	n/a
3	ARID3A	chr11:66277957-66278211	HepG2	liver:	n/a	n/a
4	ARID3A	chr11:66247614-66248465	HepG2	liver:	n/a	n/a
5	ARID3A	chr11:66234300-66234363	HepG2	liver:	n/a	n/a
6	ARID3A	chr11:66251215-66251434	HepG2	liver:	n/a	n/a
7	ATF1	chr11:66247604-66248038	K562	blood:	n/a	n/a
8	ATF2	chr11:66277830-66278304	GM12878	blood:	n/a	n/a
9	ATF2	chr11:66246889-66248518	H1-hESC	embryonic stem cell:	n/a	n/a
10	ATF2	chr11:66247730-66248071	GM12878	blood:	n/a	n/a
11	ATF2	chr11:66246169-66247029	H1-hESC	embryonic stem cell:	n/a	n/a
12	ATF2	chr11:66246176-66246874	H1-hESC	embryonic stem cell:	n/a	n/a
13	ATF2	chr11:66277812-66278311	H1-hESC	embryonic stem cell:	n/a	n/a
14	ATF2	chr11:66277713-66278216	H1-hESC	embryonic stem cell:	n/a	n/a
15	ATF2	chr11:66247402-66248342	GM12878	blood:	n/a	n/a
16	ATF2	chr11:66247383-66248448	H1-hESC	embryonic stem cell:	n/a	n/a
17	ATF3	chr11:66277865-66278274	K562	blood:	n/a	n/a
18	ATF3	chr11:66247382-66248124	A549	lung:	n/a	chr11:66247857-66247866
19	ATF3	chr11:66277814-66278419	A549	lung:	n/a	n/a
20	ATF3	chr11:66277768-66278369	A549	lung:	n/a	n/a
21	ATF3	chr11:66234314-66234513	K562	blood:	n/a	n/a
22	BACH1	chr11:66248465-66248562	K562	blood:	n/a	n/a
23	BACH1	chr11:66233920-66234843	H1-hESC	embryonic stem cell:	n/a	n/a
24	BACH1	chr11:66247117-66247686	H1-hESC	embryonic stem cell:	n/a	n/a
25	BACH1	chr11:66247902-66248311	H1-hESC	embryonic stem cell:	n/a	n/a
26	BACH1	chr11:66262625-66262703	H1-hESC	embryonic stem cell:	n/a	n/a
27	BATF	chr11:66277894-66278160	GM12878	blood:	n/a	n/a
28	BCL11A	chr11:66247448-66247744	GM12878	blood:	n/a	chr11:66247719-66247732
29	BCL3	chr11:66245114-66245780	A549	lung:	n/a	n/a
30	BCL3	chr11:66245908-66248550	A549	lung:	n/a	chr11:66247900-66247909 chr11:66247719-66247732 chr11:66248228-66248237 chr11:66247761-66247774
31	BCL3	chr11:66244431-66244848	A549	lung:	n/a	n/a
32	BCL3	chr11:66246145-66248653	A549	lung:	n/a	chr11:66247900-66247909 chr11:66247719-66247732 chr11:66248228-66248237 chr11:66247761-66247774
33	BCLAF1	chr11:66277759-66278258	K562	blood:	n/a	n/a
34	BCLAF1	chr11:66277817-66278327	GM12878	blood:	n/a	n/a
35	BCLAF1	chr11:66247343-66248133	GM12878	blood:	n/a	chr11:66247900-66247909 chr11:66247719-66247732 chr11:66247761-66247774
36	BCLAF1	chr11:66277774-66278419	GM12878	blood:	n/a	n/a
37	BHLHE40	chr11:66241612-66241799	GM12878	blood:	n/a	n/a
38	BHLHE40	chr11:66277884-66278303	K562	blood:	n/a	n/a
39	BHLHE40	chr11:66247493-66248382	GM12878	blood:	n/a	n/a
40	BHLHE40	chr11:66263280-66263323	K562	blood:	n/a	n/a
41	BHLHE40	chr11:66246946-66248351	K562	blood:	n/a	n/a
42	BHLHE40	chr11:66233924-66234417	GM12878	blood:	n/a	chr11:66234401-66234417
43	BHLHE40	chr11:66246412-66246685	K562	blood:	n/a	n/a
44	BHLHE40	chr11:66246998-66247267	GM12878	blood:	n/a	n/a
45	BHLHE40	chr11:66272819-66272841	K562	blood:	n/a	n/a
46	BHLHE40	chr11:66276851-66277148	HepG2	liver:	n/a	n/a
47	BHLHE40	chr11:66234658-66235037	GM12878	blood:	n/a	n/a
48	BHLHE40	chr11:66277890-66278524	GM12878	blood:	n/a	n/a
49	BHLHE40	chr11:66246435-66246744	GM12878	blood:	n/a	n/a
50	BHLHE40	chr11:66233914-66234042	K562	blood:	n/a	n/a

(count:2505 , 50 per page) page: 1 2 3 4 5 6 7 ... 51

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:66234348-66234398	CMK	blood:	n/a
2	chr11:66240466-66240516	GM06990	blood:	n/a
3	chr11:66247869-66247919	HCM	heart:	n/a
4	chr11:66234251-66234301	HCM	heart:	n/a
5	chr11:66234348-66234398	CMK	blood:	n/a
6	chr11:66240466-66240516	GM06990	blood:	n/a
7	chr11:66247869-66247919	HCM	heart:	n/a
8	chr11:66234251-66234301	HCM	heart:	n/a
9	chr11:66277283-66277333	AoSMC	blood vessel:	n/a
10	chr11:66247820-66247870	BJ	skin:	n/a
11	chr11:66247971-66248021	HCF	heart:	n/a
12	chr11:66276941-66276991	HRCEpiC	kidney:	n/a
13	chr11:66240466-66240516	GM12891	blood:	n/a
14	chr11:66234251-66234301	HNPCEpiC	eye:	n/a
15	chr11:66243374-66243424	NHBE	bronchial:	n/a
16	chr11:66243374-66243424	PFSK-1	brain:	n/a
17	chr11:66243077-66243127	MCF-7	breast:	n/a
18	chr11:66243077-66243127	AoSMC	blood vessel:	n/a
19	chr11:66247798-66247848	MCF-7	breast:	n/a
20	chr11:66277720-66277770	MCF10A-Er-Src	breast:	n/a
21	chr11:66238408-66238458	SK-N-SH_RA	brain:	n/a
22	chr11:66278041-66278091	HEEpiC	esophagus:	n/a
23	chr11:66244423-66244473	HCT-116	colon:	n/a
24	chr11:66278117-66278167	GM06990	blood:	n/a
25	chr11:66278006-66278056	Jurkat	blood:	n/a
26	chr11:66278117-66278167	AG04450	lung:	fetal
27	chr11:66277283-66277333	HUVEC	blood vessel:	n/a
28	chr11:66234018-66234068	HNPCEpiC	eye:	n/a
29	chr11:66277283-66277333	MCF10A-Er-Src	breast:	n/a
30	chr11:66243374-66243424	Jurkat	blood:	n/a
31	chr11:66234874-66234924	T-47D	breast:	n/a
32	chr11:66243211-66243261	AoSMC	blood vessel:	n/a
33	chr11:66278006-66278056	BE2_C	brain:	n/a
34	chr11:66243211-66243261	RPTEC	kidney:	n/a
35	chr11:66244423-66244473	HCPEpiC	choroid plexus:	n/a
36	chr11:66238408-66238458	NHDF-neo	bronchial:	n/a
37	chr11:66247701-66247751	HCT-116	colon:	n/a
38	chr11:66247869-66247919	A549	lung:	n/a
39	chr11:66243211-66243261	HCPEpiC	choroid plexus:	n/a
40	chr11:66234297-66234347	GM12892	blood:	n/a
41	chr11:66241284-66241334	PANC-1	pancreas:	n/a
42	chr11:66234186-66234236	NB4	blood:	n/a
43	chr11:66243211-66243261	LNCaP	prostate:	n/a
44	chr11:66243211-66243261	HRE	kidney:	n/a
45	chr11:66247701-66247751	MCF10A-Er-Src	breast:	n/a
46	chr11:66278006-66278056	AG10803	skin:	n/a
47	chr11:66247971-66248021	NB4	blood:	n/a
48	chr11:66278004-66278054	AG10803	skin:	n/a
49	chr11:66278006-66278056	SK-N-SH	brain:	n/a
50	chr11:66258774-66258824	ProgFib	skin:	n/a

(count:127 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr11:66240065..66243058-chr11:66275897..66279906,3	MCF-7	breast:
2	chr11:66280554..66282642-chr11:66287328..66290306,2	MCF-7	breast:
3	chr11:66190055..66192720-chr11:66235255..66236874,2	K562	blood:
4	chr11:66176296..66179598-chr11:66242738..66246499,3	MCF-7	breast:
5	chr11:66260133..66262484-chr11:66276298..66279178,3	MCF-7	breast:
6	chr11:66233892..66235640-chr11:66313416..66314952,2	K562	blood:
7	chr11:66204408..66207592-chr11:66232898..66234568,4	MCF-7	breast:
8	chr11:66245898..66247692-chr11:66270786..66272292,2	MCF-7	breast:
9	chr11:66234037..66235984-chr11:66277120..66279562,2	MCF-7	breast:
10	chr11:66234759..66237082-chr11:66443933..66445576,2	MCF-7	breast:
11	chr11:66236911..66238826-chr11:66251147..66254050,2	MCF-7	breast:
12	chr11:66246639..66249369-chr11:66359117..66362318,3	K562	blood:
13	chr11:66277255..66279154-chr11:66443896..66445716,2	MCF-7	breast:
14	chr11:66253352..66256164-chr11:66257074..66258893,2	K562	blood:
15	chr11:66246466..66249447-chr11:66272733..66277215,5	MCF-7	breast:
16	chr11:66277334..66280308-chr11:66282116..66284343,2	MCF-7	breast:
17	chr11:66250582..66252504-chr11:66263575..66266536,3	MCF-7	breast:
18	chr11:66275530..66280458-chr11:66280685..66284919,6	K562	blood:
19	chr11:66252944..66254823-chr11:66257418..66260036,2	MCF-7	breast:
20	chr11:66235227..66237987-chr11:66260877..66263080,2	K562	blood:
21	chr11:66205770..66207413-chr11:66238542..66240436,2	MCF-7	breast:
22	chr11:66246687..66248934-chr11:66312384..66314818,3	MCF-7	breast:
23	chr11:66261021..66264013-chr11:66276582..66278912,2	K562	blood:
24	chr11:66264275..66266949-chr11:66272534..66274982,2	MCF-7	breast:
25	chr11:66286543..66288664-chr11:66289775..66291929,2	MCF-7	breast:
26	chr11:66246466..66249447-chr11:66272733..66277215,5	MCF-7	breast:
27	chr11:66247121..66250078-chr11:66454971..66457807,2	MCF-7	breast:
28	chr11:66286543..66288664-chr11:66289775..66291929,2	MCF-7	breast:
29	chr11:66204033..66208144-chr11:66232603..66235665,3	K562	blood:
30	chr11:66260407..66263189-chr11:66383219..66384725,2	K562	blood:
31	chr11:66204459..66208139-chr11:66244186..66247891,5	MCF-7	breast:
32	chr11:66290822..66293457-chr11:66382909..66385562,2	K562	blood:
33	chr11:66078628..66080981-chr11:66247770..66249627,2	K562	blood:
34	chr11:66264275..66266949-chr11:66272534..66274982,2	MCF-7	breast:
35	chr11:66243353..66245736-chr11:66254515..66256675,2	MCF-7	breast:
36	chr11:66245945..66247891-chr11:66262741..66265932,3	K562	blood:
37	chr11:66257660..66259659-chr11:66383000..66385140,2	MCF-7	breast:
38	chr11:66246184..66249203-chr11:66383546..66385423,4	K562	blood:
39	chr11:66293228..66294862-chr11:66305840..66307672,2	K562	blood:
40	chr11:66281676..66283315-chr11:66382899..66385422,2	K562	blood:
41	chr11:66246350..66248077-chr11:66269423..66272131,2	MCF-7	breast:
42	chr11:66246350..66248077-chr11:66269423..66272131,2	MCF-7	breast:
43	chr11:66243721..66249369-chr11:66258892..66263387,7	MCF-7	breast:
44	chr11:66206396..66207155-chr11:66246290..66246907,2	MCF-7	breast:
45	chr11:66243721..66249369-chr11:66258892..66263387,7	MCF-7	breast:
46	chr11:66247089..66247705-chr13:37574325..37575055,2	Hela-S3	cervix:
47	chr11:66233713..66235864-chr11:66383889..66386308,2	MCF-7	breast:
48	chr11:66281474..66283176-chr11:66383771..66385422,2	K562	blood:
49	chr11:66276194..66279522-chr11:66281470..66284393,4	MCF-7	breast:
50	chr11:66255566..66258107-chr11:66360591..66362886,2	K562	blood:

(count:19 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-MRPL11-1	chr11:66244817-66245567	ENSG00000255517.2
2	lnc-MRPL11-1	chr11:66240961-66241338	ENSG00000255517.1
3	lnc-MRPL11-1	chr11:66241721-66242196	ENSG00000255517.2
4	lnc-MRPL11-1	chr11:66247510-66247663	ENSG00000255517.1
5	lnc-MRPL11-1	chr11:66247510-66247704	ENSG00000255517.1
6	lnc-MRPL11-1	chr11:66241727-66242575	NONHSAT022305
7	lnc-MRPL11-1	chr11:66244964-66245567	ENSG00000255517.1
8	lnc-DPP3-3	chr11:66290927-66290983	NONHSAT022312
9	lnc-MRPL11-1	chr11:66241615-66241696	ENSG00000255517.1
10	lnc-MRPL11-1	chr11:66247510-66247788	NONHSAT022305
11	lnc-MRPL11-1	chr11:66242401-66242575	ENSG00000255517.1
12	lnc-MRPL11-1	chr11:66247510-66247702	ENSG00000255517.1
13	lnc-MRPL11-1	chr11:66247510-66247702	ENSG00000255517.1
14	lnc-MRPL11-1	chr11:66245191-66245562	ENSG00000255517.1
15	lnc-DPP3-3	chr11:66290322-66290836	NONHSAT022312
16	lnc-MRPL11-2	chr11:66249382-66249804	expReg_chr11_6288_-
17	lnc-MRPL11-1	chr11:66241830-66242081	ENSG00000255517.1
18	lnc-MRPL11-1	chr11:66247510-66247702	ENSG00000255517.2
19	lnc-MRPL11-1	chr11:66242401-66242575	ENSG00000255517.1

No data

Variant related genes	Relation type
MRPL11	TF binding region
DPP3	TF binding region
BBS1	TF binding region
PELI3	TF binding region
ENSG00000256349	TF binding region
ENSG00000255517	TF binding region
MRPL11	CpG island
DPP3	CpG island
BBS1	CpG island
PELI3	CpG island
ENSG00000256349	CpG island
ENSG00000255517	CpG island
ENSG00000256349	chromatin interactions
ENSG00000264462	chromatin interactions
ENSG00000100908	chromatin interactions
ENSG00000173992	chromatin interactions
ENSG00000254510	chromatin interactions
ENSG00000248746	chromatin interactions
ENSG00000174547	chromatin interactions
ENSG00000173914	chromatin interactions
ENSG00000173898	chromatin interactions
ENSG00000174576	chromatin interactions
ENSG00000269990	chromatin interactions
ENSG00000239306	chromatin interactions
ENSG00000245532	chromatin interactions
ENSG00000174483	chromatin interactions
ENSG00000182791	chromatin interactions
ENSG00000174165	chromatin interactions
ENSG00000199325	chromatin interactions
ENSG00000254458	chromatin interactions
ENSG00000174684	chromatin interactions
ENSG00000174744	chromatin interactions
ENSG00000248643	chromatin interactions
ENSG00000120699	chromatin interactions
ENSG00000255517	chromatin interactions
ENSG00000264063	chromatin interactions
ENSG00000201733	chromatin interactions
ENSG00000255468	chromatin interactions
ENSG00000174851	chromatin interactions
ENSG00000254986	chromatin interactions
ENSG00000264229	chromatin interactions
ENSG00000174669	chromatin interactions
ENSG00000174516	chromatin interactions
ENSG00000168066	chromatin interactions
ENSG00000074054	chromatin interactions
ENSG00000087460	chromatin interactions
ENSG00000120697	chromatin interactions
ENSG00000164880	chromatin interactions
ENSG00000173653	chromatin interactions

Extended variants
information (count: 2608 )
Associated
traits (count: 96 )

Variant overlapped rSNPs/rCNVs (count:2608 , 50 per page) page: 1 2 3 4 5 6 7 ... 53

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs7925108	chr11:66234023-66234024	Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	13 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs370959024	chr11:66234093-66234094	Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent/Poised TSS	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
3	rs182642387	chr11:66234102-66234103	Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent/Poised TSS	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
4	rs374387987	chr11:66234106-66234107	Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent/Poised TSS	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
5	rs536945853	chr11:66234175-66234176	Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent/Poised TSS	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
6	rs186356203	chr11:66234176-66234177	Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent/Poised TSS	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
7	rs556204487	chr11:66234243-66234244	Active TSS Enhancers Bivalent/Poised TSS Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
8	rs575999665	chr11:66234417-66234418	Active TSS Enhancers Bivalent/Poised TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
9	rs544968300	chr11:66234468-66234469	Active TSS Enhancers Bivalent/Poised TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
10	rs7928882	chr11:66234765-66234766	Active TSS Enhancers Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	16 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
11	rs578135973	chr11:66234777-66234778	Active TSS Enhancers Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
12	rs540839283	chr11:66234921-66234922	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
13	rs560358321	chr11:66234972-66234973	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
14	rs529394849	chr11:66234973-66234974	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
15	rs191135194	chr11:66234994-66234995	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
16	rs530334318	chr11:66235036-66235037	Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
17	rs182969796	chr11:66235075-66235076	Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
18	rs187647459	chr11:66235107-66235108	Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers	TF binding region CpG island Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
19	rs143452280	chr11:66235237-66235238	Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Active TSS	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
20	rs75685325	chr11:66235242-66235243	Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Active TSS	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
21	rs551305444	chr11:66235309-66235310	Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Active TSS	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
22	rs137920172	chr11:66235341-66235342	Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Active TSS	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
23	rs140910248	chr11:66235409-66235410	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
24	rs145088632	chr11:66235435-66235436	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
25	rs77781448	chr11:66235455-66235456	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
26	rs532456045	chr11:66235470-66235471	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
27	rs112321101	chr11:66235474-66235475	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
28	rs556173779	chr11:66235506-66235507	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
29	rs569714685	chr11:66235509-66235510	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
30	rs192691600	chr11:66235521-66235522	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
31	rs142538002	chr11:66235528-66235529	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
32	rs374054374	chr11:66235549-66235550	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
33	rs558126271	chr11:66235558-66235559	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
34	rs374067267	chr11:66235577-66235578	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
35	rs199980830	chr11:66235631-66235632	Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
36	rs540441372	chr11:66235650-66235651	Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
37	rs200681148	chr11:66235654-66235655	Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
38	rs371662567	chr11:66235699-66235700	Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
39	rs148294193	chr11:66235714-66235715	Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
40	rs199601388	chr11:66235754-66235755	Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
41	rs368965054	chr11:66235781-66235782	Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
42	rs554926929	chr11:66235835-66235836	Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
43	rs188012387	chr11:66235939-66235940	Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
44	rs141575576	chr11:66235960-66235961	Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
45	rs568909212	chr11:66235981-66235982	Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
46	rs545006446	chr11:66236000-66236001	Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Strong transcription Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
47	rs565006840	chr11:66236043-66236044	Weak transcription Enhancers Genic enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
48	rs374206013	chr11:66236048-66236049	Weak transcription Enhancers Genic enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
49	rs527599448	chr11:66236052-66236053	Weak transcription Enhancers Genic enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
50	rs558838725	chr11:66236058-66236059	Weak transcription Enhancers Genic enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:96)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Gastric cancer	17908304	CNVD
Multiple myeloma	20724749	CNVD
Wilms tumour	21544195	CNVD
Autism	22495311	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Glioblastoma multiforme	21138945	CNVD
Acute myeloid leukemia	20729466	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	21637783	CNVD
Acute myeloid leukemia	16864856	CNVD
Chronic lymphocytic leukemia	21795749	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	21484798	CNVD
Ewing''s sarcoma	21437220	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	20837533	CNVD
Breast cancer	21264507	CNVD
Cervical cancer	21063398	CNVD
Glioblastoma multiforme	19960244	CNVD
Liposarcoma	21253554	CNVD
Neuroblastoma	18923524	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Neuroblastoma	17533364	CNVD
Breast cancer	21364760	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Prostate cancer	18632612	CNVD
Glioblastoma multiforme	21080181	CNVD
Smith-Lemli-Opitz syndrome	21572526	CNVD
Multiple myeloma	16461302	CNVD
Cancer	16751803	CNVD
Seminomas	18059402	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Metanephric adenoma	20802469	CNVD
Chordoma	21602918	CNVD
Melanoma	18172304	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
ovarian endometriomas	16273235	CNVD
Breast cancer	16417655	CNVD
Myelofibrosis	22110671	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Prostate cancer	17217626	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Breast cancer	21045282	CNVD
Breast cancer	21806811	CNVD
Breast cancer	22002566	CNVD
Ductal carcinoma	18381933	CNVD
Retinoblastoma	22278416	CNVD
Breast cancer	20953835	CNVD
oto-dental syndrome	17656375	CNVD
Asthma	21956041	CNVD
Breast cancer	17603634	CNVD
Ovarian neoplasms	16753589	CNVD
Non-small cell lung cancer	20864512	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cervical cancer	21062161	CNVD
Breast cancer	21509527	CNVD
Breast cancer	17001317	CNVD
Oral squamous cell carcinoma	16619035	CNVD
Intracranial aneurysm	16715129	CNVD
Colorectal cancer	16272173	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Colorectal cancer	16882699	CNVD
Berardinelli-seip congenital generalized lipodystrophy	17668395	CNVD
Spinal muscular atrophy	17668395	CNVD
Neonatal seizures	17668395	CNVD
Neonatal seizures	17668391	CNVD
Neuroticism	17667963	CNVD
Cancer	17916600	CNVD
Squamous cell cancer	19047905	CNVD
Multiple endocrine neoplasia type 1	19566914	CNVD
XY sex reversal	17503084	CNVD
Berardinelli-seip congenital generalized lipodystrophy	17668391	CNVD
Maculopathy	17646752	CNVD
Breast cancer	17899364	CNVD
Breast cancer	17157792	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Hodgkin''s lymphoma	17606441	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Cancer	20164919	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Melanoma	20877625	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:3361 , 50 per page) page: 1 2 3 4 5 6 7 ... 68

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:66233000-66235000	Enhancers	Fetal Brain Male	brain
2	chr11:66233200-66234800	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr11:66233200-66235000	Active TSS	ES-I3 Cell Line	embryonic stem cell
4	chr11:66233200-66235000	Active TSS	H9 Cell Line	embryonic stem cell
5	chr11:66233200-66235200	Active TSS	HUES48 Cell Line	embryonic stem cell
6	chr11:66233200-66235200	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
7	chr11:66233400-66234200	Flanking Active TSS	Primary hematopoietic stem cells	blood
8	chr11:66233400-66234200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
9	chr11:66233400-66234200	Flanking Active TSS	Fetal Thymus	thymus
10	chr11:66233400-66234200	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
11	chr11:66233400-66234800	Active TSS	Brain Anterior Caudate	brain
12	chr11:66233400-66234800	Active TSS	Rectal Mucosa Donor 29	rectum
13	chr11:66233400-66235000	Active TSS	HUES64 Cell Line	embryonic stem cell
14	chr11:66233400-66235000	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
15	chr11:66233400-66235000	Active TSS	Primary T cells from cord blood	blood
16	chr11:66233400-66235000	Active TSS	Fetal Kidney	kidney
17	chr11:66233400-66235200	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
18	chr11:66233600-66234200	Flanking Active TSS	Primary T cells fromperipheralblood	blood
19	chr11:66233600-66234200	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
20	chr11:66233600-66234200	Flanking Active TSS	Primary T killer naive cells fromperipheralblood	blood
21	chr11:66233600-66234200	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
22	chr11:66233600-66234200	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
23	chr11:66233600-66234200	Flanking Active TSS	Fetal Adrenal Gland	Adrenal Gland
24	chr11:66233600-66234200	Active TSS	Fetal Intestine Large	intestine
25	chr11:66233600-66234200	Flanking Active TSS	Fetal Muscle Trunk	muscle
26	chr11:66233600-66234200	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
27	chr11:66233600-66234200	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
28	chr11:66233600-66234200	Flanking Active TSS	Dnd41	blood
29	chr11:66233600-66234200	Flanking Active TSS	NH-A	brain
30	chr11:66233600-66234400	Active TSS	Right Atrium	heart
31	chr11:66233600-66234600	Active TSS	Colonic Mucosa	Colon
32	chr11:66233600-66234800	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
33	chr11:66233600-66234800	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
34	chr11:66233600-66234800	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
35	chr11:66233600-66234800	Active TSS	Rectal Mucosa Donor 31	rectum
36	chr11:66233600-66234800	Active TSS	Thymus	Thymus
37	chr11:66233600-66234800	Active TSS	NHEK	skin
38	chr11:66233600-66235000	Active TSS	ES-WA7 Cell Line	embryonic stem cell
39	chr11:66233600-66235000	Active TSS	H1 Cell Line	embryonic stem cell
40	chr11:66233600-66235000	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
41	chr11:66233600-66235000	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
42	chr11:66233600-66235000	Active TSS	HUES6 Cell Line	embryonic stem cell
43	chr11:66233600-66235000	Active TSS	iPS-18 Cell Line	embryonic stem cell
44	chr11:66233600-66235000	Active TSS	iPS-20b Cell Line	embryonic stem cell
45	chr11:66233600-66235000	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
46	chr11:66233600-66235000	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
47	chr11:66233600-66235000	Active TSS	Breast Myoepithelial Primary Cells	Breast
48	chr11:66233600-66235000	Active TSS	Brain Angular Gyrus	brain
49	chr11:66233600-66235000	Active TSS	Brain Cingulate Gyrus	brain
50	chr11:66233600-66235000	Active TSS	Brain Hippocampus Middle	brain

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