| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
rs869781 |
chr12:121340246-121340247 |
Active TSS Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers
|
Chromatin interactive region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
| 2 |
rs536162501 |
chr12:121340277-121340278 |
Active TSS Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
| 3 |
rs143584184 |
chr12:121340291-121340292 |
Active TSS Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
| 4 |
rs569762194 |
chr12:121340302-121340303 |
Active TSS Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
| 5 |
rs1151850 |
chr12:121340363-121340364 |
Active TSS Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
| 6 |
rs113365487 |
chr12:121340364-121340365 |
Active TSS Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
| 7 |
rs558415242 |
chr12:121340370-121340371 |
Active TSS Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
| 8 |
rs572161717 |
chr12:121340401-121340402 |
Active TSS Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
| 9 |
rs541065468 |
chr12:121340412-121340413 |
Active TSS Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
| 10 |
rs554585708 |
chr12:121340418-121340419 |
Active TSS Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
| 11 |
rs73224306 |
chr12:121340428-121340429 |
Active TSS Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
| 12 |
rs542969425 |
chr12:121340431-121340432 |
Active TSS Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
| 13 |
rs563149023 |
chr12:121340443-121340444 |
Active TSS Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
| 14 |
rs531855466 |
chr12:121340471-121340472 |
Active TSS Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
| 15 |
rs545571356 |
chr12:121340552-121340553 |
Active TSS Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
| 16 |
rs118055784 |
chr12:121340571-121340572 |
Active TSS Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
| 17 |
rs147170362 |
chr12:121340586-121340587 |
Active TSS Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
| 18 |
rs547458094 |
chr12:121340597-121340598 |
Active TSS Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
| 19 |
rs1151849 |
chr12:121340599-121340600 |
Active TSS Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
| 20 |
rs189618723 |
chr12:121340660-121340661 |
Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
| 21 |
rs183398884 |
chr12:121340695-121340696 |
Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
| 22 |
rs75922909 |
chr12:121340745-121340746 |
Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
| 23 |
rs117679209 |
chr12:121340749-121340750 |
Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
| 24 |
rs148212637 |
chr12:121340794-121340795 |
Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
| 25 |
rs1105416 |
chr12:121340799-121340800 |
Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
| 26 |
rs569861593 |
chr12:121340800-121340801 |
Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
| 27 |
rs186316405 |
chr12:121340854-121340855 |
Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
| 28 |
rs548575663 |
chr12:121340857-121340858 |
Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
| 29 |
rs190779259 |
chr12:121340884-121340885 |
Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
| 30 |
rs574497146 |
chr12:121341001-121341002 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
| 31 |
rs537045475 |
chr12:121341056-121341057 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
| 32 |
rs558973347 |
chr12:121341057-121341058 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
| 33 |
rs187106561 |
chr12:121341071-121341072 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
| 34 |
rs192880393 |
chr12:121341073-121341074 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
| 35 |
rs113992016 |
chr12:121341075-121341076 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
| 36 |
rs372377400 |
chr12:121341076-121341077 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
| 37 |
rs533019583 |
chr12:121341080-121341081 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
| 38 |
rs71076682 |
chr12:121341081-121341082 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
| 39 |
rs545300771 |
chr12:121341138-121341139 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
| 40 |
rs142765995 |
chr12:121341149-121341150 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
| 41 |
rs184601122 |
chr12:121341155-121341156 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
| 42 |
rs565158627 |
chr12:121341158-121341159 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
| 43 |
rs200351307 |
chr12:121341164-121341165 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
| 44 |
rs71076683 |
chr12:121341165-121341166 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
| 45 |
rs66511068 |
chr12:121341166-121341167 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
| 46 |
rs188740117 |
chr12:121341171-121341172 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
| 47 |
rs541134794 |
chr12:121341193-121341194 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
| 48 |
rs561001457 |
chr12:121341196-121341197 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
| 49 |
rs530087844 |
chr12:121341197-121341198 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
| 50 |
rs376240740 |
chr12:121341199-121341200 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|