Variant report

Variant	rs183398884
Chromosome Location	chr12:121340695-121340696
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv521928	chr12:121041728-121761800	Genic enhancers Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Strong transcription ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	68 gene(s)	inside rSNPs	diseases
2	nsv1037070	chr12:121069938-121459047	Weak transcription Enhancers Active TSS Genic enhancers Flanking Active TSS Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
3	nsv560438	chr12:121194565-121352206	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
4	nsv899559	chr12:121324727-121592689	Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Bivalent/Poised TSS Strong transcription Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
5	nsv560439	chr12:121340246-121341529	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
6	esv18160	chr12:121340524-121341166	Flanking Active TSS Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	n/a	n/a	inside rSNPs	diseases
7	esv19320	chr12:121340524-121342267	Active TSS Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:121339400-121341200	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
2	chr12:121339800-121340800	Flanking Active TSS	Brain Anterior Caudate	brain
3	chr12:121339800-121340800	Flanking Active TSS	Brain Cingulate Gyrus	brain
4	chr12:121339800-121340800	Flanking Active TSS	Duodenum Mucosa	Duodenum
5	chr12:121339800-121340800	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
6	chr12:121339800-121341000	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
7	chr12:121339800-121341000	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
8	chr12:121339800-121341000	Flanking Active TSS	Brain Hippocampus Middle	brain
9	chr12:121339800-121341000	Flanking Active TSS	Fetal Brain Male	brain
10	chr12:121339800-121341000	Enhancers	Placenta Amnion	Placenta Amnion
11	chr12:121339800-121341200	Flanking Active TSS	Primary T cells from cord blood	blood
12	chr12:121339800-121341200	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
13	chr12:121339800-121341400	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
14	chr12:121339800-121341400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
15	chr12:121339800-121341400	Flanking Active TSS	Adipose Nuclei	Adipose
16	chr12:121340000-121340800	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
17	chr12:121340000-121340800	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
18	chr12:121340000-121340800	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
19	chr12:121340000-121341000	Flanking Active TSS	Primary T killer memory cells from peripheral blood	blood
20	chr12:121340000-121341200	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
21	chr12:121340000-121341400	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
22	chr12:121340000-121341400	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
23	chr12:121340000-121341400	Flanking Active TSS	Dnd41	blood
24	chr12:121340000-121342400	Active TSS	H1 Cell Line	embryonic stem cell
25	chr12:121340000-121342400	Active TSS	Fetal Intestine Large	intestine
26	chr12:121340000-121342800	Active TSS	ES-I3 Cell Line	embryonic stem cell
27	chr12:121340000-121342800	Active TSS	NHDF-Ad	bronchial
28	chr12:121340200-121340800	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
29	chr12:121340200-121340800	Flanking Active TSS	Muscle Satellite Cultured Cells	--
30	chr12:121340200-121340800	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
31	chr12:121340200-121340800	Flanking Active TSS	Fetal Lung	lung
32	chr12:121340200-121340800	Flanking Active TSS	Osteobl	bone
33	chr12:121340200-121341000	Flanking Active TSS	iPS-18 Cell Line	embryonic stem cell
34	chr12:121340200-121341000	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
35	chr12:121340200-121341000	Flanking Active TSS	Brain Germinal Matrix	brain
36	chr12:121340200-121341000	Flanking Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
37	chr12:121340200-121341000	Flanking Active TSS	Colon Smooth Muscle	Colon
38	chr12:121340200-121341000	Flanking Active TSS	Fetal Heart	heart
39	chr12:121340200-121341000	Flanking Active TSS	Fetal Kidney	kidney
40	chr12:121340200-121341000	Flanking Active TSS	Rectal Smooth Muscle	rectum
41	chr12:121340200-121341000	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
42	chr12:121340200-121341000	Flanking Active TSS	K562	blood
43	chr12:121340200-121341200	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
44	chr12:121340200-121341200	Flanking Active TSS	Primary T helper memory cells from peripheral blood 2	blood
45	chr12:121340200-121341200	Flanking Active TSS	Fetal Thymus	thymus
46	chr12:121340200-121341400	Flanking Active TSS	Primary B cells from cord blood	blood
47	chr12:121340200-121341400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
48	chr12:121340200-121342600	Active TSS	NHLF	lung
49	chr12:121340200-121343000	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
50	chr12:121340400-121340800	Flanking Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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