Variant report

Variant	nsv579855
Chromosome Location	chr19:44852134-44930348
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1329)
CpG islands
(count:1161)
Chromatin interactive
region (count:14)
LncRNA
region (count:17)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1329 , 50 per page) page: 1 2 3 4 5 6 7 ... 27

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr19:44860835-44861069	HepG2	liver:	n/a	n/a
2	ATF1	chr19:44875907-44876237	K562	blood:	n/a	n/a
3	ATF1	chr19:44917786-44917800	K562	blood:	n/a	n/a
4	ATF1	chr19:44861728-44861911	K562	blood:	n/a	n/a
5	ATF1	chr19:44871198-44871556	K562	blood:	n/a	n/a
6	ATF1	chr19:44860821-44861048	K562	blood:	n/a	n/a
7	ATF1	chr19:44905595-44905930	K562	blood:	n/a	n/a
8	BACH1	chr19:44870602-44870694	K562	blood:	n/a	n/a
9	BACH1	chr19:44917598-44917627	K562	blood:	n/a	n/a
10	BACH1	chr19:44922683-44922689	K562	blood:	n/a	n/a
11	BATF	chr19:44919178-44919458	GM12878	blood:	n/a	n/a
12	BATF	chr19:44918320-44918533	GM12878	blood:	n/a	n/a
13	BATF	chr19:44916806-44917020	GM12878	blood:	n/a	n/a
14	BATF	chr19:44919536-44919764	GM12878	blood:	n/a	n/a
15	BATF	chr19:44919167-44919405	GM12878	blood:	n/a	n/a
16	BATF	chr19:44914883-44915105	GM12878	blood:	n/a	n/a
17	BATF	chr19:44913233-44913633	GM12878	blood:	n/a	n/a
18	BATF	chr19:44914833-44915116	GM12878	blood:	n/a	n/a
19	BATF	chr19:44913634-44913897	GM12878	blood:	n/a	n/a
20	BATF	chr19:44915147-44915853	GM12878	blood:	n/a	n/a
21	BATF	chr19:44914516-44914833	GM12878	blood:	n/a	n/a
22	BATF	chr19:44919764-44919964	GM12878	blood:	n/a	n/a
23	BATF	chr19:44913944-44914161	GM12878	blood:	n/a	n/a
24	BATF	chr19:44914580-44914824	GM12878	blood:	n/a	n/a
25	BATF	chr19:44913939-44914167	GM12878	blood:	n/a	n/a
26	BATF	chr19:44916804-44917060	GM12878	blood:	n/a	n/a
27	BATF	chr19:44915179-44915853	GM12878	blood:	n/a	n/a
28	BATF	chr19:44913406-44913874	GM12878	blood:	n/a	n/a
29	BATF	chr19:44919486-44919761	GM12878	blood:	n/a	n/a
30	BATF	chr19:44918337-44918531	GM12878	blood:	n/a	n/a
31	BATF	chr19:44920132-44920324	GM12878	blood:	n/a	n/a
32	BATF	chr19:44917710-44918004	GM12878	blood:	n/a	n/a
33	BCL11A	chr19:44914495-44914790	GM12878	blood:	n/a	n/a
34	BCL11A	chr19:44920063-44920223	GM12878	blood:	n/a	n/a
35	BCL11A	chr19:44913357-44913876	GM12878	blood:	n/a	chr19:44913660-44913673
36	BCL11A	chr19:44919161-44919353	GM12878	blood:	n/a	n/a
37	BCL11A	chr19:44916811-44917069	GM12878	blood:	n/a	n/a
38	BCL11A	chr19:44914868-44915122	GM12878	blood:	n/a	n/a
39	BCL11A	chr19:44914858-44915113	GM12878	blood:	n/a	n/a
40	BCL11A	chr19:44915158-44915851	GM12878	blood:	n/a	n/a
41	BCL11A	chr19:44915170-44915853	GM12878	blood:	n/a	n/a
42	BCL11A	chr19:44918909-44919142	GM12878	blood:	n/a	n/a
43	BCL11A	chr19:44917413-44917654	GM12878	blood:	n/a	n/a
44	BCL11A	chr19:44919508-44919981	GM12878	blood:	n/a	chr19:44919790-44919803
45	BCL11A	chr19:44914264-44914471	GM12878	blood:	n/a	n/a
46	BCL11A	chr19:44913354-44913935	GM12878	blood:	n/a	chr19:44913660-44913673
47	BCL11A	chr19:44919195-44919440	GM12878	blood:	n/a	n/a
48	BCL11A	chr19:44919484-44919989	GM12878	blood:	n/a	chr19:44919790-44919803
49	BCL11A	chr19:44917393-44917936	GM12878	blood:	n/a	n/a
50	BCL11A	chr19:44920248-44920439	GM12878	blood:	n/a	n/a

(count:1161 , 50 per page) page: 1 2 3 4 5 6 7 ... 24

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:44857751-44857801	PANC-1	pancreas:	n/a
2	chr19:44861241-44861291	NHBE	bronchial:	n/a
3	chr19:44857751-44857801	PANC-1	pancreas:	n/a
4	chr19:44861241-44861291	NHBE	bronchial:	n/a
5	chr19:44891400-44891450	GM12892	blood:	n/a
6	chr19:44905882-44905932	HRCEpiC	kidney:	n/a
7	chr19:44861154-44861204	GM12878	blood:	n/a
8	chr19:44905830-44905880	SAEC	small airway:	n/a
9	chr19:44864843-44864893	SAEC	small airway:	n/a
10	chr19:44905830-44905880	RPTEC	kidney:	n/a
11	chr19:44860658-44860708	MCF-7	breast:	n/a
12	chr19:44890183-44890233	Jurkat	blood:	n/a
13	chr19:44860658-44860708	AoSMC	blood vessel:	n/a
14	chr19:44864843-44864893	HepG2	liver:	n/a
15	chr19:44905788-44905838	MCF10A-Er-Src	breast:	n/a
16	chr19:44858848-44858898	SKMC	muscle:	n/a
17	chr19:44860658-44860708	PrEC	prostate:	n/a
18	chr19:44905343-44905393	SK-N-MC	brain:	n/a
19	chr19:44906522-44906572	GM12891	blood:	n/a
20	chr19:44858848-44858898	HRCEpiC	kidney:	n/a
21	chr19:44860820-44860870	LNCaP	prostate:	n/a
22	chr19:44858848-44858898	MCF10A-Er-Src	breast:	n/a
23	chr19:44905343-44905393	HEEpiC	esophagus:	n/a
24	chr19:44864843-44864893	ovcar-3	ovarian:	n/a
25	chr19:44905828-44905878	PANC-1	pancreas:	n/a
26	chr19:44861154-44861204	HCM	heart:	n/a
27	chr19:44861154-44861204	Jurkat	blood:	n/a
28	chr19:44905828-44905878	HIPEpiC	eye:	n/a
29	chr19:44860658-44860708	A549	lung:	n/a
30	chr19:44861241-44861291	PrEC	prostate:	n/a
31	chr19:44906522-44906572	Hepatocyte	liver:	n/a
32	chr19:44905882-44905932	GM19239	blood:	n/a
33	chr19:44905830-44905880	HEEpiC	esophagus:	n/a
34	chr19:44861241-44861291	LNCaP	prostate:	n/a
35	chr19:44905980-44906030	BE2_C	brain:	n/a
36	chr19:44905830-44905880	GM12891	blood:	n/a
37	chr19:44905828-44905878	NB4	blood:	n/a
38	chr19:44905916-44905966	HAEpiC	amniotic membrane:	n/a
39	chr19:44905882-44905932	ovcar-3	ovarian:	n/a
40	chr19:44905882-44905932	PrEC	prostate:	n/a
41	chr19:44860658-44860708	NH-A	brain:	n/a
42	chr19:44906522-44906572	HCF	heart:	n/a
43	chr19:44905788-44905838	HL-60	blood:	n/a
44	chr19:44861241-44861291	HepG2	liver:	n/a
45	chr19:44905782-44905832	PrEC	prostate:	n/a
46	chr19:44905830-44905880	PFSK-1	brain:	n/a
47	chr19:44905788-44905838	AG04449	skin:	fetal
48	chr19:44905343-44905393	MCF10A-Er-Src	breast:	n/a
49	chr19:44905916-44905966	SK-N-SH	brain:	n/a
50	chr19:44891400-44891450	HPAEpiC	pulmonary alveolar:	n/a

(count:14 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr19:44860583..44861870-chr2:133104308..133105302,7	Hela-S3	cervix:
2	chr19:44895650..44897507-chr2:133068550..133071124,2	MCF-7	breast:
3	chr19:44858590..44859395-chr2:133106608..133107319,5	MCF-7	breast:
4	chr19:44716323..44716954-chr19:44860163..44860822,2	MCF-7	breast:
5	chr19:44928515..44931460-chr19:44942869..44945862,2	MCF-7	breast:
6	chr19:44860567..44861162-chr2:133104579..133105358,2	MCF-7	breast:
7	chr19:44858582..44859085-chr2:133106403..133107293,2	K562	blood:
8	chr19:44858569..44859729-chr2:133105937..133107575,6	MCF-7	breast:
9	chr19:44927888..44930648-chr19:44931223..44933120,2	MCF-7	breast:
10	chr19:44852656..44854693-chr19:44860503..44863096,2	K562	blood:
11	chr19:44846057..44848981-chr19:44852585..44854533,2	MCF-7	breast:
12	chr19:44859033..44861169-chr2:133104533..133106354,2	K562	blood:
13	chr19:44847055..44849987-chr19:44852679..44854366,2	MCF-7	breast:
14	chr19:44860226..44861181-chr2:133104577..133105347,5	HCT-116	colon:

(count:17 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ZNF229-1	chr19:44900827-44901421	NONHSAT066696
2	lnc-ZNF233-1	chr19:44861873-44861914	ucscGeneNc_uc002omd_1
3	lnc-ZNF233-1	chr19:44861854-44861914	NONHSAT066691
4	lnc-ZNF233-1	chr19:44864478-44864688	NONHSAT066691
5	lnc-ZNF233-1	chr19:44865967-44867731	NONHSAT066692
6	lnc-ZNF233-1	chr19:44876944-44877057	NONHSAT066694
7	lnc-ZNF229-1	chr19:44896603-44896630	ENSG00000267188.1
8	lnc-ZNF233-1	chr19:44865967-44867898	ucscGeneNc_uc002omd_1
9	lnc-ZNF233-1	chr19:44865967-44867898	NONHSAT066691
10	lnc-ZNF233-1	chr19:44863913-44863989	NONHSAT066691
11	lnc-ZNF229-1	chr19:44905734-44905767	NONHSAT066696
12	lnc-ZNF229-1	chr19:44901364-44901421	ENSG00000267188.1
13	lnc-ZNF233-1	chr19:44868665-44868848	NONHSAT066691
14	lnc-ZNF233-1	chr19:44861873-44861914	NONHSAT066692
15	lnc-ZNF233-1	chr19:44867724-44867898	NONHSAT066694
16	lnc-ZNF229-1	chr19:44921685-44921712	NONHSAT066697
17	lnc-ZNF233-1	chr19:44868036-44868132	NONHSAT066691

No data

Variant related genes	Relation type
ENSG00000267173	TF binding region
ZNF112	TF binding region
ZNF285	TF binding region
ENSG00000267173	CpG island
ZNF112	CpG island
ZNF285	CpG island
ENSG00000272769	chromatin interactions
ENSG00000062370	chromatin interactions
ENSG00000131115	chromatin interactions

Extended variants
information (count: 3025 )
Associated
traits (count: 66 )

Variant overlapped rSNPs/rCNVs (count:3025 , 50 per page) page: 1 2 3 4 5 6 7 ... 61

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2722737	chr19:44852134-44852135	Weak transcription ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs143661197	chr19:44852135-44852136	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
3	rs564791756	chr19:44852190-44852191	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
4	rs544245198	chr19:44852214-44852215	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
5	rs183152220	chr19:44852266-44852267	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
6	rs546568020	chr19:44852271-44852272	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
7	rs376775107	chr19:44852329-44852330	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs368181394	chr19:44852361-44852362	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
9	rs188032967	chr19:44852487-44852488	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
10	rs1011567	chr19:44852503-44852504	Weak transcription ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs549417362	chr19:44852529-44852530	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
12	rs568166515	chr19:44852532-44852533	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
13	rs537249345	chr19:44852538-44852539	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
14	rs193024549	chr19:44852733-44852734	Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs577053410	chr19:44852756-44852757	Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs539471287	chr19:44852757-44852758	Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs185171108	chr19:44852760-44852761	Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs146824067	chr19:44852798-44852799	Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs2164113	chr19:44852820-44852821	Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
20	rs187756776	chr19:44852963-44852964	Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs192672287	chr19:44852964-44852965	Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs148963036	chr19:44852984-44852985	Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs564652582	chr19:44853005-44853006	Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs143755649	chr19:44853028-44853029	Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs543474092	chr19:44853078-44853079	Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs546855817	chr19:44853108-44853109	Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs183581992	chr19:44853145-44853146	Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs560123592	chr19:44853196-44853197	Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs371986779	chr19:44853211-44853212	Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs529205646	chr19:44853262-44853263	Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs148151031	chr19:44853276-44853277	Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs374364099	chr19:44853285-44853286	Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs536885545	chr19:44853301-44853302	Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs550733064	chr19:44853333-44853334	Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs570635517	chr19:44853390-44853391	Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs539751687	chr19:44853392-44853393	Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs529194787	chr19:44853450-44853451	ZNF genes & repeats Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs58800072	chr19:44853520-44853521	ZNF genes & repeats Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs572921740	chr19:44853569-44853570	ZNF genes & repeats Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs535419175	chr19:44853570-44853571	ZNF genes & repeats Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs543274953	chr19:44853592-44853593	ZNF genes & repeats Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs141096984	chr19:44853594-44853595	ZNF genes & repeats Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs575275303	chr19:44853607-44853608	ZNF genes & repeats Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs146905509	chr19:44853641-44853642	ZNF genes & repeats Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs552312864	chr19:44853663-44853664	ZNF genes & repeats Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs558346124	chr19:44853683-44853684	ZNF genes & repeats Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs137863788	chr19:44853696-44853697	ZNF genes & repeats Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs7251134	chr19:44853707-44853708	ZNF genes & repeats Weak transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
49	rs560410774	chr19:44853714-44853715	ZNF genes & repeats Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs73555197	chr19:44853726-44853727	ZNF genes & repeats Weak transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a

Variant related diseases (count:66)

Disease	PMID	Source
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Autism	22495311	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Ductal carcinoma	22052326	CNVD
Congenital nephrotic syndrome	18421352	CNVD
Astrocytoma	17934521	CNVD
Leukemia	17361228	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Breast cancer	21858162	CNVD
Breast cancer	17603634	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Oligodendroglial tumors	17285580	CNVD
renal disease	20603712	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Breast cancer	16608533	CNVD
Neuroblastoma	18923191	CNVD
Breast cancer	21364760	CNVD
Chordoma	18071362	CNVD
Urothelial carcinoma	21177765	CNVD
small cell lung cancer	20016488	CNVD
Wilms tumour	21544195	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Metanephric adenoma	20802469	CNVD
Acute myeloid leukemia	16864856	CNVD
Bladder cancer	21909424	CNVD
Medulloblastoma	16783165	CNVD
Acute myeloid leukemia	20729466	CNVD
Lung cancer	18438408	CNVD
Astrocytoma	22246337	CNVD
Ovarian cancer	22174824	CNVD
Cancer	20164920	CNVD
Multiple myeloma	16616336	CNVD
Ovarian cancer	20800559	CNVD
Ovarian clear cell carcinoma	19293255	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	16272173	CNVD
Spondylocostal dysostosis	21085971	CNVD
Nicotine metabolism	21956041	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Glioblastoma multiforme	17002787	CNVD
Ovarian cancer	20844748	CNVD
Breast cancer	17133270	CNVD
Hepatocellular carcinoma	16750200	CNVD
Colorectal cancer	20459617	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	17431168	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD

Chromatin state (count:1083 , 50 per page) page: 1 2 3 4 5 6 7 ... 22

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:44823200-44856200	ZNF genes & repeats	Liver	Liver
2	chr19:44840800-44860000	Weak transcription	NHDF-Ad	bronchial
3	chr19:44844200-44859600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr19:44844200-44859800	Weak transcription	Osteobl	bone
5	chr19:44844800-44853000	Weak transcription	HSMMtube	muscle
6	chr19:44845000-44860000	Weak transcription	Placenta Amnion	Placenta Amnion
7	chr19:44845200-44860000	Weak transcription	HSMM	muscle
8	chr19:44845400-44859800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
9	chr19:44847000-44853200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
10	chr19:44847400-44855200	ZNF genes & repeats	Duodenum Smooth Muscle	Duodenum
11	chr19:44847800-44855400	Weak transcription	Right Ventricle	heart
12	chr19:44848200-44852200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr19:44848200-44853400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
14	chr19:44848200-44854800	Weak transcription	Fetal Brain Male	brain
15	chr19:44849000-44852200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
16	chr19:44849000-44852800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
17	chr19:44849600-44859800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
18	chr19:44850000-44853400	Weak transcription	Skeletal Muscle Male	skeletal muscle
19	chr19:44850400-44860000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
20	chr19:44850400-44860200	Weak transcription	Left Ventricle	heart
21	chr19:44851400-44860400	Weak transcription	Aorta	Aorta
22	chr19:44851600-44852600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
23	chr19:44852000-44853600	ZNF genes & repeats	A549	lung
24	chr19:44852200-44852600	ZNF genes & repeats	Foreskin Keratinocyte Primary Cells skin02	Skin
25	chr19:44852200-44853000	ZNF genes & repeats	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
26	chr19:44852400-44853600	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Female	--
27	chr19:44852400-44855400	ZNF genes & repeats	Adipose Nuclei	Adipose
28	chr19:44852600-44853400	ZNF genes & repeats	Ganglion Eminence derived primary cultured neurospheres	brain
29	chr19:44852600-44859800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
30	chr19:44852800-44853000	Weak transcription	Fetal Heart	heart
31	chr19:44853000-44854000	ZNF genes & repeats	Fetal Lung	lung
32	chr19:44853200-44853400	ZNF genes & repeats	Ovary	ovary
33	chr19:44853200-44853800	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
34	chr19:44853800-44854200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
35	chr19:44854400-44860000	Weak transcription	Ovary	ovary
36	chr19:44854600-44855400	ZNF genes & repeats	Ganglion Eminence derived primary cultured neurospheres	brain
37	chr19:44854800-44855000	ZNF genes & repeats	Rectal Mucosa Donor 31	rectum
38	chr19:44854800-44855200	ZNF genes & repeats	Fetal Lung	lung
39	chr19:44854800-44855400	ZNF genes & repeats	Foreskin Melanocyte Primary Cells skin03	Skin
40	chr19:44854800-44855400	ZNF genes & repeats	A549	lung
41	chr19:44854800-44855600	ZNF genes & repeats	Fetal Brain Male	brain
42	chr19:44854800-44857200	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
43	chr19:44854800-44860000	Weak transcription	Pancreas	Pancrea
44	chr19:44855000-44859600	Weak transcription	Skeletal Muscle Female	skeletal muscle
45	chr19:44855400-44858000	Weak transcription	A549	lung
46	chr19:44855400-44860000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
47	chr19:44855600-44860000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
48	chr19:44855800-44856800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
49	chr19:44855800-44860000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
50	chr19:44856200-44859200	Weak transcription	HMEC	breast

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links