Variant report

Variant nsv580358
Chromosome Location chr19:56851001-56869794
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:56850400-56851600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
2 chr19:56851200-56852000 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
3 chr19:56851600-56852000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
4 chr19:56852000-56854000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr19:56854000-56854200 ZNF genes & repeats Brain Dorsolateral Prefrontal Cortex brain
6 chr19:56854000-56855000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr19:56854200-56854800 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
8 chr19:56854200-56863200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr19:56854800-56855000 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
10 chr19:56854800-56857600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr19:56855000-56870200 Weak transcription Duodenum Smooth Muscle Duodenum
12 chr19:56855200-56855800 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
13 chr19:56855800-56856600 Weak transcription HUES64 Cell Line embryonic stem cell
14 chr19:56856600-56857800 Enhancers HUES64 Cell Line embryonic stem cell
15 chr19:56856600-56857800 Enhancers iPS-15b Cell Line embryonic stem cell
16 chr19:56856600-56859600 Enhancers iPS-18 Cell Line embryonic stem cell
17 chr19:56856800-56857600 Enhancers K562 blood
18 chr19:56857000-56857200 Enhancers H1 Cell Line embryonic stem cell
19 chr19:56857000-56857800 Enhancers iPS-20b Cell Line embryonic stem cell
20 chr19:56857200-56858000 Enhancers HUES48 Cell Line embryonic stem cell
21 chr19:56857400-56857800 Enhancers ES-I3 Cell Line embryonic stem cell
22 chr19:56857400-56857800 Enhancers HUES6 Cell Line embryonic stem cell
23 chr19:56857600-56858000 Flanking Active TSS K562 blood
24 chr19:56857600-56859200 Weak transcription H1 Cell Line embryonic stem cell
25 chr19:56857600-56859600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
26 chr19:56857800-56859200 Weak transcription ES-I3 Cell Line embryonic stem cell
27 chr19:56857800-56859200 Weak transcription iPS-15b Cell Line embryonic stem cell
28 chr19:56857800-56859200 Weak transcription iPS-20b Cell Line embryonic stem cell
29 chr19:56857800-56859400 Weak transcription HUES6 Cell Line embryonic stem cell
30 chr19:56858000-56858400 Enhancers K562 blood
31 chr19:56858000-56859200 Weak transcription HUES48 Cell Line embryonic stem cell
32 chr19:56858400-56859400 Flanking Active TSS K562 blood
33 chr19:56859200-56859400 ZNF genes & repeats Ovary ovary
34 chr19:56859200-56859600 Enhancers ES-I3 Cell Line embryonic stem cell
35 chr19:56859200-56859800 Enhancers H1 Cell Line embryonic stem cell
36 chr19:56859200-56859800 Enhancers HUES48 Cell Line embryonic stem cell
37 chr19:56859200-56859800 Enhancers iPS-20b Cell Line embryonic stem cell
38 chr19:56859200-56860000 Enhancers iPS-15b Cell Line embryonic stem cell
39 chr19:56859400-56859800 Enhancers HUES6 Cell Line embryonic stem cell
40 chr19:56859400-56860000 Enhancers K562 blood
41 chr19:56859400-56872800 Weak transcription Ovary ovary
42 chr19:56859600-56859800 Enhancers HUES64 Cell Line embryonic stem cell
43 chr19:56859600-56862400 Weak transcription iPS-18 Cell Line embryonic stem cell
44 chr19:56859600-56862400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
45 chr19:56860000-56862800 Weak transcription iPS-15b Cell Line embryonic stem cell
46 chr19:56861600-56862000 Enhancers Colon Smooth Muscle Colon
47 chr19:56861800-56862000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr19:56862000-56868400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr19:56862400-56863000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
50 chr19:56862400-56863400 Enhancers iPS-18 Cell Line embryonic stem cell

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