No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs10935443 |
chr3:141594547-141594548 |
Active TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
6 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
2 |
rs561542468 |
chr3:141594548-141594549 |
Active TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs542550272 |
chr3:141594571-141594572 |
Active TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs554162525 |
chr3:141594581-141594582 |
Active TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs572520660 |
chr3:141594582-141594583 |
Active TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs374398363 |
chr3:141594613-141594614 |
Active TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs546262950 |
chr3:141594623-141594624 |
Active TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs372187880 |
chr3:141594670-141594671 |
Active TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs146998633 |
chr3:141594698-141594699 |
Active TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs544042524 |
chr3:141594734-141594735 |
Active TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs16846285 |
chr3:141594747-141594748 |
Active TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs140922200 |
chr3:141594769-141594770 |
Active TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs560954223 |
chr3:141594805-141594806 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs548122238 |
chr3:141594871-141594872 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs566118694 |
chr3:141594881-141594882 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs552268686 |
chr3:141594895-141594896 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs193039563 |
chr3:141594903-141594904 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs377749217 |
chr3:141594910-141594911 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs552231401 |
chr3:141594916-141594917 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs570425272 |
chr3:141594935-141594936 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs537964244 |
chr3:141594959-141594960 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs556441226 |
chr3:141594997-141594998 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs559417936 |
chr3:141595046-141595047 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
9 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs568675027 |
chr3:141595065-141595066 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
9 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs375511476 |
chr3:141595090-141595091 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
9 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs554538799 |
chr3:141595121-141595122 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs11539482 |
chr3:141595160-141595161 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs528089040 |
chr3:141595217-141595218 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs566325461 |
chr3:141595330-141595331 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs545849411 |
chr3:141595340-141595341 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs558147283 |
chr3:141595354-141595355 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs576416959 |
chr3:141595360-141595361 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs185627103 |
chr3:141595378-141595379 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs562337061 |
chr3:141595390-141595391 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs529876772 |
chr3:141595402-141595403 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs11539488 |
chr3:141595484-141595485 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs541708051 |
chr3:141595516-141595517 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs11539489 |
chr3:141595527-141595528 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
13 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
39 |
rs527607678 |
chr3:141595543-141595544 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs551856249 |
chr3:141595545-141595546 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs150197806 |
chr3:141595564-141595565 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs531261304 |
chr3:141595576-141595577 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs549951207 |
chr3:141595581-141595582 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs369621570 |
chr3:141595597-141595598 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs377453333 |
chr3:141595598-141595599 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs11539490 |
chr3:141595606-141595607 |
Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs375035159 |
chr3:141595612-141595613 |
Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs11539491 |
chr3:141595613-141595614 |
Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs368376011 |
chr3:141595618-141595619 |
Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs371057028 |
chr3:141595629-141595630 |
Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|