Variant report

Variant rs11539489
Chromosome Location chr3:141595527-141595528
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:141593400-141596600 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
2 chr3:141593400-141597400 Active TSS iPS-15b Cell Line embryonic stem cell
3 chr3:141593400-141597600 Active TSS Fetal Kidney kidney
4 chr3:141593400-141597600 Active TSS HMEC breast
5 chr3:141593400-141597600 Active TSS NHLF lung
6 chr3:141593400-141598000 Active TSS ES-I3 Cell Line embryonic stem cell
7 chr3:141593600-141596400 Active TSS Pancreas Pancrea
8 chr3:141593600-141597000 Active TSS Pancreatic Islets Pancreatic Islet
9 chr3:141593600-141597000 Active TSS Placenta Placenta
10 chr3:141593600-141597200 Active TSS Breast Myoepithelial Primary Cells Breast
11 chr3:141593600-141597600 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr3:141593600-141598400 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
13 chr3:141593800-141595600 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
14 chr3:141593800-141596400 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr3:141593800-141596600 Active TSS Cortex derived primary cultured neurospheres brain
16 chr3:141593800-141596600 Active TSS Brain Anterior Caudate brain
17 chr3:141593800-141596800 Active TSS Brain Hippocampus Middle brain
18 chr3:141593800-141596800 Active TSS Fetal Adrenal Gland Adrenal Gland
19 chr3:141593800-141596800 Active TSS Fetal Brain Female brain
20 chr3:141593800-141596800 Active TSS Skeletal Muscle Female skeletal muscle
21 chr3:141593800-141596800 Active TSS Thymus Thymus
22 chr3:141593800-141597200 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr3:141593800-141597200 Active TSS Brain Cingulate Gyrus brain
24 chr3:141593800-141597200 Active TSS NH-A brain
25 chr3:141593800-141597200 Active TSS NHDF-Ad bronchial
26 chr3:141593800-141597400 Active TSS HUES6 Cell Line embryonic stem cell
27 chr3:141593800-141597400 Active TSS Stomach Smooth Muscle stomach
28 chr3:141593800-141597400 Active TSS HSMMtube muscle
29 chr3:141593800-141597600 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
30 chr3:141593800-141597600 Active TSS H9 Cell Line embryonic stem cell
31 chr3:141593800-141597600 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
32 chr3:141593800-141597600 Active TSS Fetal Intestine Large intestine
33 chr3:141593800-141597600 Active TSS HSMM muscle
34 chr3:141593800-141598000 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
35 chr3:141593800-141598000 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
36 chr3:141593800-141598000 Active TSS Brain Dorsolateral Prefrontal Cortex brain
37 chr3:141593800-141598400 Active TSS H1 Cell Line embryonic stem cell
38 chr3:141594000-141596000 Active TSS Primary hematopoietic stem cells blood
39 chr3:141594000-141596200 Active TSS Rectal Smooth Muscle rectum
40 chr3:141594000-141596600 Active TSS Brain Substantia Nigra brain
41 chr3:141594000-141596800 Active TSS Brain Angular Gyrus brain
42 chr3:141594000-141597600 Active TSS Brain Inferior Temporal Lobe brain
43 chr3:141594000-141597600 Active TSS Fetal Muscle Leg muscle
44 chr3:141594000-141597600 Active TSS Right Ventricle heart
45 chr3:141594000-141598000 Active TSS ES-WA7 Cell Line embryonic stem cell
46 chr3:141594200-141596800 Active TSS Brain Germinal Matrix brain
47 chr3:141594200-141597000 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
48 chr3:141594200-141597600 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr3:141594200-141598000 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr3:141594200-141598000 Active TSS Colonic Mucosa Colon

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