Variant report

Variant nsv597681
Chromosome Location chr5:27426728-27526060
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:206 , 50 per page) page: 1 2 3 4 5
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:27434000-27435200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
2 chr5:27434200-27435200 Enhancers NHEK skin
3 chr5:27435000-27435200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr5:27435000-27435400 Enhancers HUES64 Cell Line embryonic stem cell
5 chr5:27435000-27435400 Enhancers iPS-15b Cell Line embryonic stem cell
6 chr5:27435000-27435600 Enhancers HUES48 Cell Line embryonic stem cell
7 chr5:27435200-27436200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr5:27436200-27436600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr5:27436400-27436600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr5:27436800-27449400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr5:27442800-27443200 Enhancers Pancreatic Islets Pancreatic Islet
12 chr5:27446600-27449200 Weak transcription H9 Cell Line embryonic stem cell
13 chr5:27447600-27448400 ZNF genes & repeats Spleen Spleen
14 chr5:27450600-27451200 Enhancers Fetal Heart heart
15 chr5:27450800-27451000 Active TSS Pancreatic Islets Pancreatic Islet
16 chr5:27450800-27451200 Enhancers Rectal Smooth Muscle rectum
17 chr5:27450800-27451400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr5:27451000-27451400 Flanking Active TSS Pancreatic Islets Pancreatic Islet
19 chr5:27451400-27452000 Enhancers Pancreatic Islets Pancreatic Islet
20 chr5:27467800-27468400 Enhancers Cortex derived primary cultured neurospheres brain
21 chr5:27467800-27468600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
22 chr5:27468000-27468400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr5:27468000-27468600 Enhancers iPS-15b Cell Line embryonic stem cell
24 chr5:27468400-27472000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr5:27468400-27472200 Weak transcription Cortex derived primary cultured neurospheres brain
26 chr5:27468600-27470000 Weak transcription iPS-15b Cell Line embryonic stem cell
27 chr5:27468600-27472000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
28 chr5:27470000-27470400 Enhancers ES-I3 Cell Line embryonic stem cell
29 chr5:27470000-27470600 Enhancers iPS-15b Cell Line embryonic stem cell
30 chr5:27470400-27471800 Weak transcription ES-I3 Cell Line embryonic stem cell
31 chr5:27470600-27471800 Weak transcription iPS-15b Cell Line embryonic stem cell
32 chr5:27471000-27471800 Enhancers HUES64 Cell Line embryonic stem cell
33 chr5:27471200-27471600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr5:27471400-27472000 Enhancers HUES6 Cell Line embryonic stem cell
35 chr5:27471600-27471800 Enhancers HUES48 Cell Line embryonic stem cell
36 chr5:27471600-27471800 Enhancers A549 lung
37 chr5:27471600-27472000 Enhancers Hela-S3 cervix
38 chr5:27471600-27472400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr5:27471800-27472000 Enhancers ES-I3 Cell Line embryonic stem cell
40 chr5:27471800-27472000 Enhancers iPS-15b Cell Line embryonic stem cell
41 chr5:27471800-27472000 Enhancers iPS-18 Cell Line embryonic stem cell
42 chr5:27471800-27472200 Flanking Active TSS HUES48 Cell Line embryonic stem cell
43 chr5:27471800-27472200 Flanking Active TSS HUES64 Cell Line embryonic stem cell
44 chr5:27471800-27472200 Flanking Active TSS A549 lung
45 chr5:27471800-27472200 Enhancers HepG2 liver
46 chr5:27471800-27474600 Active TSS iPS-20b Cell Line embryonic stem cell
47 chr5:27472000-27472200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr5:27472000-27472200 Flanking Active TSS HUES6 Cell Line embryonic stem cell
49 chr5:27472000-27472200 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
50 chr5:27472000-27472200 Flanking Active TSS iPS-18 Cell Line embryonic stem cell

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