Variant report

Variant nsv7693
Chromosome Location chr11:17556788-17601771
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:390 , 50 per page) page: 1 2 3 4 5 6 7 8
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:17538400-17562200 Weak transcription Small Intestine intestine
2 chr11:17547200-17563200 Genic enhancers Fetal Intestine Small intestine
3 chr11:17553600-17557000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
4 chr11:17553600-17557200 Weak transcription Breast Myoepithelial Primary Cells Breast
5 chr11:17553600-17561800 Weak transcription Gastric stomach
6 chr11:17553600-17562200 Weak transcription H1 Cell Line embryonic stem cell
7 chr11:17553800-17556800 Weak transcription Brain Inferior Temporal Lobe brain
8 chr11:17553800-17558200 Weak transcription Stomach Mucosa stomach
9 chr11:17553800-17558600 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr11:17553800-17563200 Weak transcription Colonic Mucosa Colon
11 chr11:17555400-17560400 Weak transcription Duodenum Mucosa Duodenum
12 chr11:17555800-17562400 Weak transcription Rectal Mucosa Donor 29 rectum
13 chr11:17556000-17558000 Enhancers Hela-S3 cervix
14 chr11:17556200-17556800 Weak transcription Fetal Intestine Large intestine
15 chr11:17556600-17557400 Enhancers Brain Anterior Caudate brain
16 chr11:17556800-17557400 Enhancers Cortex derived primary cultured neurospheres brain
17 chr11:17556800-17557600 Enhancers Brain Inferior Temporal Lobe brain
18 chr11:17556800-17558800 Enhancers Fetal Intestine Large intestine
19 chr11:17557200-17557400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr11:17557200-17557800 Enhancers Breast Myoepithelial Primary Cells Breast
21 chr11:17557800-17558000 Weak transcription Breast Myoepithelial Primary Cells Breast
22 chr11:17558000-17558400 Enhancers Breast Myoepithelial Primary Cells Breast
23 chr11:17558000-17563400 Weak transcription Hela-S3 cervix
24 chr11:17558200-17559800 Enhancers Stomach Mucosa stomach
25 chr11:17558400-17563200 Weak transcription Breast Myoepithelial Primary Cells Breast
26 chr11:17558600-17559000 Enhancers Rectal Mucosa Donor 31 rectum
27 chr11:17558800-17562200 Genic enhancers Fetal Intestine Large intestine
28 chr11:17559000-17561800 Weak transcription Rectal Mucosa Donor 31 rectum
29 chr11:17559600-17560600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
30 chr11:17559800-17560200 Enhancers iPS-18 Cell Line embryonic stem cell
31 chr11:17559800-17562000 Weak transcription Stomach Mucosa stomach
32 chr11:17560200-17560600 Bivalent Enhancer Fetal Muscle Trunk muscle
33 chr11:17560200-17562200 Weak transcription iPS-18 Cell Line embryonic stem cell
34 chr11:17560400-17562600 Enhancers Duodenum Mucosa Duodenum
35 chr11:17560600-17560800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
36 chr11:17560800-17562000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
37 chr11:17561800-17562200 Enhancers Gastric stomach
38 chr11:17561800-17562800 Enhancers Sigmoid Colon Sigmoid Colon
39 chr11:17561800-17563000 Enhancers Rectal Mucosa Donor 31 rectum
40 chr11:17562000-17564000 Enhancers Stomach Mucosa stomach
41 chr11:17562000-17565200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
42 chr11:17562200-17562400 Enhancers H1 Cell Line embryonic stem cell
43 chr11:17562200-17562400 Enhancers iPS-18 Cell Line embryonic stem cell
44 chr11:17562200-17562400 Transcr. at gene 5' and 3' Fetal Intestine Large intestine
45 chr11:17562200-17564400 Weak transcription Gastric stomach
46 chr11:17562400-17562600 Enhancers Small Intestine intestine
47 chr11:17562400-17562800 Flanking Active TSS Fetal Intestine Large intestine
48 chr11:17562400-17564400 Weak transcription H1 Cell Line embryonic stem cell
49 chr11:17562400-17566200 Active TSS Rectal Mucosa Donor 29 rectum
50 chr11:17562600-17562800 Flanking Active TSS Duodenum Mucosa Duodenum

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