Variant report

Variant	nsv823467
Chromosome Location	chr6:28046710-28048540
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:28047868-28047922	HepG2	liver:	n/a	n/a
2	ARID3A	chr6:28048532-28048998	HepG2	liver:	n/a	n/a
3	ATF1	chr6:28047726-28048133	K562	blood:	n/a	n/a
4	ATF1	chr6:28048430-28049387	K562	blood:	n/a	n/a
5	ATF2	chr6:28048448-28049556	GM12878	blood:	n/a	n/a
6	ATF2	chr6:28048438-28049095	H1-hESC	embryonic stem cell:	n/a	n/a
7	ATF2	chr6:28048346-28049134	H1-hESC	embryonic stem cell:	n/a	n/a
8	ATF2	chr6:28048350-28049566	GM12878	blood:	n/a	n/a
9	ATF3	chr6:28048353-28049196	H1-hESC	embryonic stem cell:	n/a	chr6:28048970-28048977 chr6:28048966-28048981 chr6:28048969-28048989 chr6:28048969-28048980 chr6:28048970-28048978 chr6:28048958-28048978 chr6:28048970-28048980 chr6:28048967-28048980 chr6:28048970-28048980 chr6:28048969-28048977 chr6:28048968-28048979 chr6:28048967-28048980
10	ATF3	chr6:28048444-28049199	K562	blood:	n/a	chr6:28048970-28048977 chr6:28048966-28048981 chr6:28048969-28048989 chr6:28048969-28048980 chr6:28048970-28048978 chr6:28048958-28048978 chr6:28048970-28048980 chr6:28048967-28048980 chr6:28048970-28048980 chr6:28048969-28048977 chr6:28048968-28048979 chr6:28048967-28048980
11	ATF3	chr6:28047710-28047994	K562	blood:	n/a	n/a
12	ATF3	chr6:28048412-28048960	A549	lung:	n/a	n/a
13	ATF3	chr6:28048411-28048982	A549	lung:	n/a	chr6:28048970-28048977 chr6:28048966-28048981 chr6:28048969-28048980 chr6:28048970-28048978 chr6:28048958-28048978 chr6:28048970-28048980 chr6:28048967-28048980 chr6:28048970-28048980 chr6:28048969-28048977 chr6:28048968-28048979 chr6:28048967-28048980
14	BACH1	chr6:28047696-28048060	H1-hESC	embryonic stem cell:	n/a	n/a
15	BATF	chr6:28047723-28047951	GM12878	blood:	n/a	n/a
16	BCL3	chr6:28048346-28049045	A549	lung:	n/a	chr6:28048957-28048966 chr6:28048711-28048720
17	BCL3	chr6:28048482-28048948	A549	lung:	n/a	chr6:28048711-28048720
18	BCLAF1	chr6:28048425-28049532	GM12878	blood:	n/a	chr6:28049372-28049381 chr6:28048957-28048966 chr6:28048711-28048720
19	BCLAF1	chr6:28048350-28049009	K562	blood:	n/a	chr6:28048957-28048966 chr6:28048711-28048720
20	BCLAF1	chr6:28048441-28049028	GM12878	blood:	n/a	chr6:28048957-28048966 chr6:28048711-28048720
21	BCLAF1	chr6:28048426-28049109	K562	blood:	n/a	chr6:28048957-28048966 chr6:28048711-28048720
22	BHLHE40	chr6:28048507-28049114	K562	blood:	n/a	chr6:28048957-28048973
23	BHLHE40	chr6:28048453-28049661	GM12878	blood:	n/a	chr6:28048957-28048973
24	BHLHE40	chr6:28047727-28047994	GM12878	blood:	n/a	n/a
25	BHLHE40	chr6:28047694-28048037	K562	blood:	n/a	n/a
26	BRCA1	chr6:28048514-28049222	Hela-S3	cervix:	n/a	n/a
27	CBX3	chr6:28048377-28049161	K562	blood:	n/a	n/a
28	CBX3	chr6:28048342-28049353	HCT-116	colon:	n/a	n/a
29	CBX3	chr6:28047582-28049486	K562	blood:	n/a	n/a
30	CCNT2	chr6:28047765-28047968	K562	blood:	n/a	n/a
31	CEBPB	chr6:28046699-28046870	A549	lung:	n/a	chr6:28046793-28046804
32	CEBPB	chr6:28046730-28046904	K562	blood:	n/a	chr6:28046793-28046804
33	CEBPB	chr6:28048473-28049127	Hela-S3	cervix:	n/a	n/a
34	CEBPB	chr6:28048521-28049053	HepG2	liver:	n/a	n/a
35	CEBPB	chr6:28048388-28049119	K562	blood:	n/a	n/a
36	CEBPB	chr6:28048441-28049655	GM12878	blood:	n/a	n/a
37	CEBPB	chr6:28047804-28047916	HepG2	liver:	n/a	n/a
38	CEBPB	chr6:28046640-28046965	HepG2	liver:	n/a	chr6:28046793-28046804
39	CEBPD	chr6:28048527-28048867	HepG2	liver:	n/a	n/a
40	CEBPD	chr6:28048441-28048908	HepG2	liver:	n/a	n/a
41	CEBPD	chr6:28048491-28049079	K562	blood:	n/a	n/a
42	CHD1	chr6:28047906-28048208	GM12878	blood:	n/a	n/a
43	CHD1	chr6:28048488-28049477	GM12878	blood:	n/a	n/a
44	CHD2	chr6:28048515-28049471	GM12878	blood:	n/a	n/a
45	CHD2	chr6:28047949-28048072	H1-hESC	embryonic stem cell:	n/a	n/a
46	CHD2	chr6:28047805-28048096	GM12878	blood:	n/a	n/a
47	CHD2	chr6:28048426-28049182	Hela-S3	cervix:	n/a	n/a
48	CHD2	chr6:28048457-28049129	HepG2	liver:	n/a	n/a
49	CREB1	chr6:28048344-28049323	HepG2	liver:	n/a	chr6:28048967-28048980
50	CREB1	chr6:28048272-28049408	HepG2	liver:	n/a	chr6:28048967-28048980

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:28046730-28046780	CMK	blood:	n/a
2	chr6:28046730-28046780	AoSMC	blood vessel:	n/a
3	chr6:28046730-28046780	K562	blood:	n/a
4	chr6:28046730-28046780	HEK293	kidney:	embryo
5	chr6:28046730-28046780	Jurkat	blood:	n/a
6	chr6:28046730-28046780	BJ	skin:	n/a
7	chr6:28046730-28046780	HCM	heart:	n/a
8	chr6:28046730-28046780	MCF-7	breast:	n/a
9	chr6:28046730-28046780	NH-A	brain:	n/a
10	chr6:28046730-28046780	HepG2	liver:	n/a
11	chr6:28046730-28046780	HNPCEpiC	eye:	n/a
12	chr6:28046730-28046780	AG09319	gingival:	n/a
13	chr6:28046730-28046780	HAEpiC	amniotic membrane:	n/a
14	chr6:28046730-28046780	HIPEpiC	eye:	n/a
15	chr6:28046730-28046780	HEEpiC	esophagus:	n/a
16	chr6:28046730-28046780	T-47D	breast:	n/a
17	chr6:28046730-28046780	NT2-D1	testis:	n/a
18	chr6:28046730-28046780	NHBE	bronchial:	n/a
19	chr6:28046730-28046780	NHDF-neo	bronchial:	n/a
20	chr6:28046730-28046780	SKMC	muscle:	n/a
21	chr6:28046730-28046780	SAEC	small airway:	n/a
22	chr6:28046730-28046780	HMEC	breast:	n/a
23	chr6:28046730-28046780	GM19239	blood:	n/a
24	chr6:28046730-28046780	ECC-1	luminal epithelium:	n/a
25	chr6:28046730-28046780	BE2_C	brain:	n/a
26	chr6:28046730-28046780	Caco-2	colon:	n/a
27	chr6:28046730-28046780	HCF	heart:	n/a
28	chr6:28046730-28046780	HCT-116	colon:	n/a
29	chr6:28046730-28046780	HRCEpiC	kidney:	n/a
30	chr6:28046730-28046780	ProgFib	skin:	n/a
31	chr6:28046730-28046780	NB4	blood:	n/a
32	chr6:28046730-28046780	Hela-S3	cervix:	n/a
33	chr6:28046730-28046780	HPAEpiC	pulmonary alveolar:	n/a
34	chr6:28046730-28046780	HUVEC	blood vessel:	n/a
35	chr6:28046730-28046780	GM12878	blood:	n/a
36	chr6:28046730-28046780	HRE	kidney:	n/a
37	chr6:28046730-28046780	A549	lung:	n/a
38	chr6:28046730-28046780	LNCaP	prostate:	n/a
39	chr6:28046730-28046780	AG09309	skin:	n/a
40	chr6:28046730-28046780	AG10803	skin:	n/a
41	chr6:28046730-28046780	PFSK-1	brain:	n/a
42	chr6:28046730-28046780	HCPEpiC	choroid plexus:	n/a
43	chr6:28046730-28046780	PrEC	prostate:	n/a
44	chr6:28046730-28046780	U87	brain:	n/a
45	chr6:28046730-28046780	ovcar-3	ovarian:	n/a
46	chr6:28046730-28046780	HRPEpiC	eye:	n/a
47	chr6:28046730-28046780	IMR90	lung:	fetal
48	chr6:28046730-28046780	H1-hESC	embryonic stem cell:	embryo
49	chr6:28046730-28046780	HL-60	blood:	n/a
50	chr6:28046730-28046780	GM06990	blood:	n/a

No.	Distal block	Cell Line	Cell type
1	chr6:27858986..27862091-chr6:28047541..28050017,3	K562	blood:
2	chr6:28045344..28046935-chr6:28047195..28048919,2	K562	blood:
3	chr6:27864591..27866445-chr6:28044322..28046847,2	K562	blood:
4	chr6:28047155..28050172-chr6:28104375..28106249,3	K562	blood:
5	chr6:28046681..28048670-chr6:28358880..28361224,2	K562	blood:
6	chr6:27858116..27862502-chr6:28047404..28050448,4	K562	blood:
7	chr6:28046111..28048022-chr6:28095723..28098620,2	K562	blood:
8	chr6:28046527..28048657-chr6:28057860..28059913,2	MCF-7	breast:
9	chr6:28044713..28049958-chr6:28107484..28111355,5	K562	blood:
10	chr6:28040138..28042745-chr6:28048469..28050463,2	K562	blood:
11	chr6:28048448..28050071-chr6:28234359..28236283,2	K562	blood:
12	chr6:28044681..28046793-chr6:28367579..28369114,2	K562	blood:
13	chr6:27115027..27116000-chr6:28048354..28049079,2	Hela-S3	cervix:
14	chr6:27803974..27806831-chr6:28047434..28050953,3	K562	blood:
15	chr13:39260551..39262193-chr6:28047138..28049723,2	MCF-7	breast:
16	chr6:28046886..28048721-chr6:28303106..28304865,2	K562	blood:
17	chr6:27859779..27863183-chr6:28046529..28048591,3	MCF-7	breast:
18	chr6:27805460..27807795-chr6:28047138..28049507,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ZKSCAN4-4	chr6:28046570-28046750	ENSG00000272009.1
2	lnc-ZKSCAN4-4	chr6:28046573-28046750	NONHSAT108424
3	lnc-ZKSCAN4-4	chr6:28048404-28048908	ENSG00000272009.1
4	lnc-ZKSCAN4-4	chr6:28048404-28048908	NONHSAT108424

Variant related genes	Relation type
ZNF165	TF binding region
ZNF165	CpG island
ENSG00000197279	chromatin interactions
ENSG00000197062	chromatin interactions
ENSG00000219891	chromatin interactions
ENSG00000269293	chromatin interactions
ENSG00000150893	chromatin interactions
ENSG00000233224	chromatin interactions
ENSG00000197153	chromatin interactions
ENSG00000265565	chromatin interactions
ENSG00000235109	chromatin interactions
ENSG00000184348	chromatin interactions
ENSG00000220721	chromatin interactions
ENSG00000198315	chromatin interactions
ENSG00000196331	chromatin interactions
ENSG00000233822	chromatin interactions
ENSG00000238610	chromatin interactions
ENSG00000261839	chromatin interactions
ENSG00000272009	chromatin interactions

Extended variants
information (count: 63 )
Associated
traits (count: 102 )

Variant overlapped rSNPs/rCNVs (count:63 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs9393884	chr6:28046789-28046790	Enhancers Weak transcription	TF binding region Chromatin interactive region	9 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs367822160	chr6:28046805-28046806	Enhancers Weak transcription	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
3	rs77954914	chr6:28046811-28046812	Enhancers Weak transcription	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
4	rs566613901	chr6:28046812-28046813	Enhancers Weak transcription	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
5	rs369701877	chr6:28046825-28046826	Enhancers Weak transcription	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
6	rs372283315	chr6:28046866-28046867	Enhancers Weak transcription	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
7	rs552459714	chr6:28046899-28046900	Enhancers Weak transcription	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
8	rs569539774	chr6:28046922-28046923	Enhancers Weak transcription	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
9	rs545490685	chr6:28046935-28046936	Enhancers Weak transcription	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
10	rs186809912	chr6:28046936-28046937	Enhancers Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
11	rs373578984	chr6:28046937-28046938	Enhancers Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
12	rs76788504	chr6:28047014-28047015	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
13	rs74893238	chr6:28047044-28047045	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
14	rs12211199	chr6:28047070-28047071	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
15	rs553936196	chr6:28047087-28047088	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
16	rs34994331	chr6:28047088-28047089	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
17	rs61128712	chr6:28047091-28047092	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
18	rs576837518	chr6:28047123-28047124	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
19	rs139109418	chr6:28047229-28047230	Enhancers Flanking Active TSS Active TSS Weak transcription	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
20	rs376611179	chr6:28047243-28047244	Enhancers Flanking Active TSS Active TSS Weak transcription	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
21	rs75446291	chr6:28047246-28047247	Enhancers Flanking Active TSS Active TSS Weak transcription	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
22	rs541771500	chr6:28047307-28047308	Enhancers Flanking Active TSS Active TSS Weak transcription	Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
23	rs36088471	chr6:28047408-28047409	Active TSS Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
24	rs146208751	chr6:28047409-28047410	Active TSS Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
25	rs59665685	chr6:28047424-28047425	Active TSS Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
26	rs139360152	chr6:28047468-28047469	Active TSS Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
27	rs372645804	chr6:28047515-28047516	Active TSS Enhancers Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
28	rs530072889	chr6:28047533-28047534	Active TSS Enhancers Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
29	rs551697710	chr6:28047551-28047552	Active TSS Enhancers Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
30	rs201759205	chr6:28047576-28047577	Active TSS Enhancers Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
31	rs541156251	chr6:28047577-28047578	Active TSS Enhancers Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
32	rs566725934	chr6:28047606-28047607	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
33	rs190655342	chr6:28047759-28047760	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
34	rs147797536	chr6:28047857-28047858	Active TSS Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
35	rs369466421	chr6:28047865-28047866	Active TSS Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
36	rs560649310	chr6:28047880-28047881	Active TSS Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
37	rs34205672	chr6:28047897-28047898	Active TSS Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
38	rs532457040	chr6:28047965-28047966	Active TSS Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
39	rs372325819	chr6:28048016-28048017	Active TSS Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
40	rs34526418	chr6:28048029-28048030	Active TSS Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
41	rs150912078	chr6:28048079-28048080	Active TSS Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
42	rs139406038	chr6:28048099-28048100	Active TSS Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
43	rs548933281	chr6:28048109-28048110	Active TSS Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
44	rs368700400	chr6:28048141-28048142	Active TSS Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
45	rs568747983	chr6:28048155-28048156	Active TSS Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
46	rs568472430	chr6:28048286-28048287	Active TSS Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
47	rs181180986	chr6:28048306-28048307	Active TSS Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
48	rs62401428	chr6:28048316-28048317	Active TSS Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
49	rs77809030	chr6:28048319-28048320	Active TSS Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
50	rs35942186	chr6:28048322-28048323	Active TSS Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:102)

Disease	PMID	Source
Acute lymphoblastic leukemia	22237106	CNVD
Follicular lymphoma	20505157	CNVD
Glioblastoma multiforme	21080181	CNVD
Ewing''s sarcoma	21437220	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Leukemia	21518781	CNVD
Cancer	21637783	CNVD
Facial dysmorphism	22105932	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Bladder cancer	19088036	CNVD
Wilms tumour	21544195	CNVD
Uveal melanoma	21693616	CNVD
Biliary cancer	19435499	CNVD
Malaria	21533027	CNVD
Retinoblastoma	19183342	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
Lung cancer	18438408	CNVD
Ewing''s sarcoma	17952124	CNVD
Gastric cancer	16891809	CNVD
Ovarian cancer	21781307	CNVD
Autism	21448237	CNVD
Cancer	20164919	CNVD
Melanoma	18172304	CNVD
Breast cancer	22844521	CNVD
HIV/AIDS	22844521	CNVD
Ovarian cancer	22844521	CNVD
Prostate cancer	22844521	CNVD
Psoriasis	22844521	CNVD
Rheumatoid arthritis	22844521	CNVD
Sclerosis systemic	22844521	CNVD
Systemic lupus erythematosus	22844521	CNVD
Breast cancer	22522925	CNVD
Breast cancer	21552322	CNVD
Immune disease	21076436	CNVD
Autoimmune disease	19135723	CNVD
Systemic lupus erythematosus	17953491	CNVD
Recurrent Infections	22737222	CNVD
Systemic lupus erythematosus	21904924	CNVD
Ependymoma	19289631	CNVD
Gestational infection	22844521	CNVD
Head circumference	22844521	CNVD
Infertility	22844521	CNVD
Recurrent birth weight diabetes	22844521	CNVD
Obesity	22844521	CNVD
Recurrent pregnancy loss	22844521	CNVD
Intellectual disability	21811512	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Congenital anomalies of the kidney and urinary tract	18694510	CNVD
Nasopharyngeal cancer	22815911	CNVD
Hepatocellular carcinoma	16750200	CNVD
Basal cell lymphoma	21115979	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Breast cancer	17133270	CNVD
Autism	22495311	CNVD
Cancer	16790693	CNVD
Breast cancer	22032731	CNVD
Cervical cancer	21062161	CNVD
Breast cancer	21785460	CNVD
Retinoblastoma	16790693	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Systemic lupus erythematosus	17503323	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
T-cell lymphomas	19863542	CNVD
Urothelial carcinoma	18382360	CNVD
Cancer	21183584	CNVD
Hodgkin''s lymphoma	17606441	CNVD
small cell lung cancer	20016488	CNVD
Renal cell carcinoma	18765545	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Gastric cancer	17908304	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	16397240	CNVD
Metanephric adenoma	20802469	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	21364760	CNVD
Schizophrenia	19571809	CNVD
Schizophrenia	19571808	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Neuroblastoma	16790693	CNVD
Bipolar disorder	19114987	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD

Chromatin state (count:240 , 50 per page) page: 1 2 3 4 5

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:28043200-28047800	Weak transcription	Spleen	Spleen
2	chr6:28045200-28047600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr6:28045600-28047800	Weak transcription	Right Atrium	heart
4	chr6:28045800-28047800	Weak transcription	Fetal Brain Male	brain
5	chr6:28046000-28047800	Weak transcription	Fetal Heart	heart
6	chr6:28046200-28047000	Enhancers	GM12878-XiMat	blood
7	chr6:28046200-28047400	Enhancers	K562	blood
8	chr6:28046400-28047600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
9	chr6:28046600-28046800	Enhancers	Left Ventricle	heart
10	chr6:28046600-28046800	Enhancers	Skeletal Muscle Female	skeletal muscle
11	chr6:28046600-28047400	Enhancers	Breast Myoepithelial Primary Cells	Breast
12	chr6:28046800-28047000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr6:28046800-28047000	Enhancers	Lung	lung
14	chr6:28046800-28047600	Enhancers	Primary B cells from peripheral blood	blood
15	chr6:28046800-28047600	Enhancers	Placenta	Placenta
16	chr6:28046800-28047800	Weak transcription	Left Ventricle	heart
17	chr6:28047000-28047200	Enhancers	Primary T helper cells PMA-I stimulated	--
18	chr6:28047000-28047200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
19	chr6:28047000-28047200	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
20	chr6:28047000-28047600	Flanking Active TSS	GM12878-XiMat	blood
21	chr6:28047000-28047600	Enhancers	HepG2	liver
22	chr6:28047000-28047800	Enhancers	Cortex derived primary cultured neurospheres	brain
23	chr6:28047000-28047800	Weak transcription	Lung	lung
24	chr6:28047000-28048400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
25	chr6:28047200-28047400	Enhancers	Primary hematopoietic stem cells	blood
26	chr6:28047200-28047400	Enhancers	Primary hematopoietic stem cells short term culture	blood
27	chr6:28047200-28047400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
28	chr6:28047200-28047400	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
29	chr6:28047200-28047600	Enhancers	Primary B cells from cord blood	blood
30	chr6:28047200-28047600	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
31	chr6:28047200-28047600	Enhancers	Liver	Liver
32	chr6:28047200-28047600	Enhancers	Pancreatic Islets	Pancreatic Islet
33	chr6:28047200-28047600	Enhancers	Rectal Mucosa Donor 31	rectum
34	chr6:28047200-28047800	Active TSS	Fetal Brain Female	brain
35	chr6:28047200-28049000	Active TSS	Monocytes-CD14+_RO01746	blood
36	chr6:28047200-28049200	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
37	chr6:28047200-28049400	Active TSS	Hela-S3	cervix
38	chr6:28047400-28047600	Active TSS	Primary neutrophils fromperipheralblood	blood
39	chr6:28047400-28047600	Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
40	chr6:28047400-28047600	Enhancers	Brain Hippocampus Middle	brain
41	chr6:28047400-28047600	Enhancers	Dnd41	blood
42	chr6:28047400-28047800	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
43	chr6:28047400-28048200	Active TSS	Primary hematopoietic stem cells	blood
44	chr6:28047400-28049200	Active TSS	Primary hematopoietic stem cells short term culture	blood
45	chr6:28047400-28049200	Active TSS	Colonic Mucosa	Colon
46	chr6:28047400-28049200	Active TSS	Duodenum Mucosa	Duodenum
47	chr6:28047400-28049200	Active TSS	Rectal Mucosa Donor 29	rectum
48	chr6:28047400-28049200	Active TSS	K562	blood
49	chr6:28047400-28051400	Active TSS	Breast Myoepithelial Primary Cells	Breast
50	chr6:28047600-28047800	Flanking Active TSS	Primary B cells from cord blood	blood

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